RNA–Protein interactions for RNA: ENST00000577664.5

CDK5RAP3-204, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 568 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-204ENST00000577664 UBE2IP63279 158 aaKnown RBP10.83□□□□□ -0.68
CDK5RAP3-204ENST00000577664 CXADRP78310 365 aa10.83□□□□□ -0.68
CDK5RAP3-204ENST00000577664 C1orf61Q13536 156 aa10.83□□□□□ -0.68
CDK5RAP3-204ENST00000577664 MPP2Q14168 576 aa10.83□□□□□ -0.68
CDK5RAP3-204ENST00000577664 LY6DQ14210 128 aa10.83□□□□□ -0.68
CDK5RAP3-204ENST00000577664 GRB7Q14451 532 aa10.83□□□□□ -0.68
CDK5RAP3-204ENST00000577664 PLA2G4EQ3MJ16 856 aa10.83□□□□□ -0.68
CDK5RAP3-204ENST00000577664 PRAMEF14Q5SWL7 426 aa10.83□□□□□ -0.68
CDK5RAP3-204ENST00000577664 C6orf132Q5T0Z8 1188 aa10.83□□□□□ -0.68
CDK5RAP3-204ENST00000577664 METTL2BQ6P1Q9 378 aaKnown RBP10.83□□□□□ -0.68
CDK5RAP3-204ENST00000577664 TTC23LQ6PF05 361 aa10.83□□□□□ -0.68
CDK5RAP3-204ENST00000577664 SLC30A9Q6PML9 568 aa10.83□□□□□ -0.68
CDK5RAP3-204ENST00000577664 PIWIL4Q7Z3Z4 852 aaKnown RBP10.83□□□□□ -0.68
CDK5RAP3-204ENST00000577664 C4orf33Q8N1A6 199 aa10.83□□□□□ -0.68
CDK5RAP3-204ENST00000577664 PHC3Q8NDX5 983 aa10.83□□□□□ -0.68
CDK5RAP3-204ENST00000577664 FAM46DQ8NEK8 389 aa10.83□□□□□ -0.68
CDK5RAP3-204ENST00000577664 SPDYE1Q8NFV5 336 aaPredicted RBP10.83□□□□□ -0.68
CDK5RAP3-204ENST00000577664 OR4C6Q8NH72 309 aa10.83□□□□□ -0.68
CDK5RAP3-204ENST00000577664 RDH11Q8TC12 318 aa10.83□□□□□ -0.68
CDK5RAP3-204ENST00000577664 LMX1AQ8TE12 382 aa10.83□□□□□ -0.68
CDK5RAP3-204ENST00000577664 SNRNP27Q8WVK2 155 aaKnown RBP10.83□□□□□ -0.68
CDK5RAP3-204ENST00000577664 RMDN2Q96LZ7 410 aa10.83□□□□□ -0.68
CDK5RAP3-204ENST00000577664 MENTQ9BUN1 341 aa10.83□□□□□ -0.68
CDK5RAP3-204ENST00000577664 WWP1Q9H0M0 922 aa10.83□□□□□ -0.68
CDK5RAP3-204ENST00000577664 MRPL46Q9H2W6 279 aaKnown RBP10.83□□□□□ -0.68
CDK5RAP3-204ENST00000577664 CENPHQ9H3R5 247 aa10.83□□□□□ -0.68
CDK5RAP3-204ENST00000577664 SLC40A1Q9NP59 571 aa10.83□□□□□ -0.68
CDK5RAP3-204ENST00000577664 PCMTD2Q9NV79 361 aa10.83□□□□□ -0.68
CDK5RAP3-204ENST00000577664 ZNF358Q9NW07 568 aa10.83□□□□□ -0.68
CDK5RAP3-204ENST00000577664 UCKL1Q9NWZ5 548 aa10.83□□□□□ -0.68
CDK5RAP3-204ENST00000577664 SCHIP1Q9P0W5 487 aaPredicted RBP10.83□□□□□ -0.68
CDK5RAP3-204ENST00000577664 IKZF3Q9UKT9 509 aa10.83□□□□□ -0.68
CDK5RAP3-204ENST00000577664 EMCNQ9ULC0 261 aa10.83□□□□□ -0.68
CDK5RAP3-204ENST00000577664 TMCO1Q9UM00 188 aa10.83□□□□□ -0.68
CDK5RAP3-204ENST00000577664 COLEC10Q9Y6Z7 277 aa10.83□□□□□ -0.68
CDK5RAP3-204ENST00000577664 ARHGEF17Q96PE2 2063 aaPredicted RBP10.83□□□□□ -0.68
CDK5RAP3-204ENST00000577664 TP53BP1Q12888 1972 aaPredicted RBP10.83□□□□□ -0.68
CDK5RAP3-204ENST00000577664 SYCE1LA8MT33 242 aa10.82□□□□□ -0.68
CDK5RAP3-204ENST00000577664 MYO1CO00159 1063 aa10.82□□□□□ -0.68
CDK5RAP3-204ENST00000577664 CDC7O00311 574 aa10.82□□□□□ -0.68
CDK5RAP3-204ENST00000577664 NOBOXO60393 691 aa10.82□□□□□ -0.68
CDK5RAP3-204ENST00000577664 ZWINTO95229 277 aa10.82□□□□□ -0.68
CDK5RAP3-204ENST00000577664 CATP04040 527 aaKnown RBP10.82□□□□□ -0.68
CDK5RAP3-204ENST00000577664 PROCP04070 461 aa10.82□□□□□ -0.68
CDK5RAP3-204ENST00000577664 ANXA6P08133 673 aa10.82□□□□□ -0.68
CDK5RAP3-204ENST00000577664 MTHFD1P11586 935 aaKnown RBP10.82□□□□□ -0.68
CDK5RAP3-204ENST00000577664 PNLIPP16233 465 aa10.82□□□□□ -0.68
CDK5RAP3-204ENST00000577664 HSD17B2P37059 387 aa10.82□□□□□ -0.68
CDK5RAP3-204ENST00000577664 RPIAP49247 311 aa10.82□□□□□ -0.68
CDK5RAP3-204ENST00000577664 HNMTP50135 292 aa10.82□□□□□ -0.68
CDK5RAP3-204ENST00000577664 NFKB2Q00653 900 aa10.82□□□□□ -0.68
CDK5RAP3-204ENST00000577664 ABRQ12979 859 aa10.82□□□□□ -0.68
CDK5RAP3-204ENST00000577664 NR1D2Q14995 579 aa10.82□□□□□ -0.68
CDK5RAP3-204ENST00000577664 ARHGAP19Q14CB8 494 aa10.82□□□□□ -0.68
CDK5RAP3-204ENST00000577664 RTP5Q14D33 572 aa10.82□□□□□ -0.68
CDK5RAP3-204ENST00000577664 SUZ12Q15022 739 aaKnown RBP10.82□□□□□ -0.68
CDK5RAP3-204ENST00000577664 TGFBIQ15582 683 aa10.82□□□□□ -0.68
CDK5RAP3-204ENST00000577664 OR4D1Q15615 310 aa10.82□□□□□ -0.68
CDK5RAP3-204ENST00000577664 TSNQ15631 228 aaKnown RBP10.82□□□□□ -0.68
CDK5RAP3-204ENST00000577664 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.82□□□□□ -0.68
CDK5RAP3-204ENST00000577664 UBE2R2Q712K3 238 aaPredicted RBP10.82□□□□□ -0.68
CDK5RAP3-204ENST00000577664 TMPRSS12Q86WS5 348 aa10.82□□□□□ -0.68
CDK5RAP3-204ENST00000577664 SPNS2Q8IVW8 549 aa10.82□□□□□ -0.68
CDK5RAP3-204ENST00000577664 KLHDC8AQ8IYD2 350 aa10.82□□□□□ -0.68
CDK5RAP3-204ENST00000577664 SPATA6LQ8N4H0 392 aa10.82□□□□□ -0.68
CDK5RAP3-204ENST00000577664 PDPRQ8NCN5 879 aa10.82□□□□□ -0.68
CDK5RAP3-204ENST00000577664 HMGCLL1Q8TB92 370 aa10.82□□□□□ -0.68
CDK5RAP3-204ENST00000577664 MCOLN3Q8TDD5 553 aa10.82□□□□□ -0.68
CDK5RAP3-204ENST00000577664 TCP10LQ8TDR4 215 aa10.82□□□□□ -0.68
CDK5RAP3-204ENST00000577664 ZDHHC1Q8WTX9 485 aa10.82□□□□□ -0.68
CDK5RAP3-204ENST00000577664 RAD51AP1Q96B01 352 aa10.82□□□□□ -0.68
CDK5RAP3-204ENST00000577664 CCDC138Q96M89 665 aa10.82□□□□□ -0.68
CDK5RAP3-204ENST00000577664 TSNARE1Q96NA8 513 aa10.82□□□□□ -0.68
CDK5RAP3-204ENST00000577664 C1QTNF3Q9BXJ4 246 aa10.82□□□□□ -0.68
CDK5RAP3-204ENST00000577664 OSGEPL1Q9H4B0 414 aa10.82□□□□□ -0.68
CDK5RAP3-204ENST00000577664 KIR3DX1Q9H7L2 352 aa10.82□□□□□ -0.68
CDK5RAP3-204ENST00000577664 CAAP1Q9H8G2 361 aa10.82□□□□□ -0.68
CDK5RAP3-204ENST00000577664 IL21RQ9HBE5 538 aa10.82□□□□□ -0.68
CDK5RAP3-204ENST00000577664 POT1Q9NUX5 634 aa10.82□□□□□ -0.68
CDK5RAP3-204ENST00000577664 NCKIPSDQ9NZQ3 722 aa10.82□□□□□ -0.68
CDK5RAP3-204ENST00000577664 PTBP2Q9UKA9 531 aaKnown RBP10.82□□□□□ -0.68
CDK5RAP3-204ENST00000577664 ADAMTS6Q9UKP5 1117 aa10.82□□□□□ -0.68
CDK5RAP3-204ENST00000577664 SRPK3Q9UPE1 567 aa10.82□□□□□ -0.68
CDK5RAP3-204ENST00000577664 PDE10AQ9Y233 779 aa10.82□□□□□ -0.68
CDK5RAP3-204ENST00000577664 ARID1BQ8NFD5 2236 aaPredicted RBP10.82□□□□□ -0.68
CDK5RAP3-204ENST00000577664 TMEM131Q92545 1883 aa10.82□□□□□ -0.68
CDK5RAP3-204ENST00000577664 ARHGEF33A8MVX0 844 aa10.81□□□□□ -0.68
CDK5RAP3-204ENST00000577664 G3V2L1 256 aa10.81□□□□□ -0.68
CDK5RAP3-204ENST00000577664 BTN3A1O00481 513 aa10.81□□□□□ -0.68
CDK5RAP3-204ENST00000577664 TPBGLP0DKB5 382 aa10.81□□□□□ -0.68
CDK5RAP3-204ENST00000577664 CYP2A7P20853 494 aa10.81□□□□□ -0.68
CDK5RAP3-204ENST00000577664 RPA3P35244 121 aaPredicted RBP10.81□□□□□ -0.68
CDK5RAP3-204ENST00000577664 GMPRP36959 345 aa10.81□□□□□ -0.68
CDK5RAP3-204ENST00000577664 DNAJB13P59910 316 aa10.81□□□□□ -0.68
CDK5RAP3-204ENST00000577664 PHKG1Q16816 387 aa10.81□□□□□ -0.68
CDK5RAP3-204ENST00000577664 HSP90B2PQ58FF3 399 aa10.81□□□□□ -0.68
CDK5RAP3-204ENST00000577664 ZCCHC8Q6NZY4 707 aaKnown RBP10.81□□□□□ -0.68
CDK5RAP3-204ENST00000577664 ZNF438Q7Z4V0 828 aa10.81□□□□□ -0.68
CDK5RAP3-204ENST00000577664 SLC9B2Q86UD5 537 aa10.81□□□□□ -0.68
CDK5RAP3-204ENST00000577664 GPSM1Q86YR5 675 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms