RNA–Protein interactions for RNA: ENST00000574799.5

CCDC40-212, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best)

Gene CCDC40, Length 3,795 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-212ENST00000574799 CCR1P32246 355 aa9.38□□□□□ -0.91
CCDC40-212ENST00000574799 DCTP40126 519 aa9.38□□□□□ -0.91
CCDC40-212ENST00000574799 LCP2Q13094 533 aa9.38□□□□□ -0.91
CCDC40-212ENST00000574799 MBTPS1Q14703 1052 aa9.38□□□□□ -0.91
CCDC40-212ENST00000574799 PON2Q15165 354 aa9.38□□□□□ -0.91
CCDC40-212ENST00000574799 UGT3A2Q3SY77 523 aa9.38□□□□□ -0.91
CCDC40-212ENST00000574799 FAM72AQ5TYM5 149 aa9.38□□□□□ -0.91
CCDC40-212ENST00000574799 ZNF691Q5VV52 312 aa9.38□□□□□ -0.91
CCDC40-212ENST00000574799 FAM72DQ6L9T8 149 aa9.38□□□□□ -0.91
CCDC40-212ENST00000574799 FAM72BQ86X60 149 aa9.38□□□□□ -0.91
CCDC40-212ENST00000574799 ZDHHC21Q8IVQ6 265 aa9.38□□□□□ -0.91
CCDC40-212ENST00000574799 C19orf18Q8NEA5 215 aa9.38□□□□□ -0.91
CCDC40-212ENST00000574799 IL17RDQ8NFM7 739 aa9.38□□□□□ -0.91
CCDC40-212ENST00000574799 BPIFB1Q8TDL5 484 aa9.38□□□□□ -0.91
CCDC40-212ENST00000574799 DEDD2Q8WXF8 326 aa9.38□□□□□ -0.91
CCDC40-212ENST00000574799 MSANTD3Q96H12 275 aa9.38□□□□□ -0.91
CCDC40-212ENST00000574799 ZNF300Q96RE9 604 aaPredicted RBP9.38□□□□□ -0.91
CCDC40-212ENST00000574799 PRKD2Q9BZL6 878 aa9.38□□□□□ -0.91
CCDC40-212ENST00000574799 DPY30Q9C005 99 aa9.38□□□□□ -0.91
CCDC40-212ENST00000574799 TRIM45Q9H8W5 580 aaPredicted RBP9.38□□□□□ -0.91
CCDC40-212ENST00000574799 NTN4Q9HB63 628 aa9.38□□□□□ -0.91
CCDC40-212ENST00000574799 ZFP14Q9HCL3 533 aa9.38□□□□□ -0.91
CCDC40-212ENST00000574799 ING3Q9NXR8 418 aa9.38□□□□□ -0.91
CCDC40-212ENST00000574799 OR12D3Q9UGF7 316 aa9.38□□□□□ -0.91
CCDC40-212ENST00000574799 SNX7Q9UNH6 387 aa9.38□□□□□ -0.91
CCDC40-212ENST00000574799 ST3GAL5Q9UNP4 418 aa9.38□□□□□ -0.91
CCDC40-212ENST00000574799 TCRBV5S2A0A599 114 aa9.37□□□□□ -0.91
CCDC40-212ENST00000574799 OR51F1A6NGY5 319 aa9.37□□□□□ -0.91
CCDC40-212ENST00000574799 METTL15A6NJ78 407 aa9.37□□□□□ -0.91
CCDC40-212ENST00000574799 CYP2A7P20853 494 aa9.37□□□□□ -0.91
CCDC40-212ENST00000574799 CD68P34810 354 aaPredicted RBP9.37□□□□□ -0.91
CCDC40-212ENST00000574799 FCGRTP55899 365 aa9.37□□□□□ -0.91
CCDC40-212ENST00000574799 POU6F2P78424 691 aaPredicted RBP9.37□□□□□ -0.91
CCDC40-212ENST00000574799 MXD1Q05195 221 aa9.37□□□□□ -0.91
CCDC40-212ENST00000574799 UPP1Q16831 310 aa9.37□□□□□ -0.91
CCDC40-212ENST00000574799 B3GALNT2Q8NCR0 500 aa9.37□□□□□ -0.91
CCDC40-212ENST00000574799 TEX37Q96LM6 180 aa9.37□□□□□ -0.91
CCDC40-212ENST00000574799 SMOQ99835 787 aa9.37□□□□□ -0.91
CCDC40-212ENST00000574799 CLPBQ9H078 707 aa9.37□□□□□ -0.91
CCDC40-212ENST00000574799 OR51E2Q9H255 320 aa9.37□□□□□ -0.91
CCDC40-212ENST00000574799 UBQLN1Q9UMX0 589 aaKnown RBP9.37□□□□□ -0.91
CCDC40-212ENST00000574799 CHD5Q8TDI0 1954 aa9.37□□□□□ -0.91
CCDC40-212ENST00000574799 TET1Q8NFU7 2136 aa9.37□□□□□ -0.91
CCDC40-212ENST00000574799 FAM234BA2RU67 622 aa9.37□□□□□ -0.91
CCDC40-212ENST00000574799 ARL5CA6NH57 179 aa9.37□□□□□ -0.91
CCDC40-212ENST00000574799 ZNF487B1APH4 448 aa9.37□□□□□ -0.91
CCDC40-212ENST00000574799 ARVCFO00192 962 aa9.37□□□□□ -0.91
CCDC40-212ENST00000574799 BTN3A1O00481 513 aa9.37□□□□□ -0.91
CCDC40-212ENST00000574799 AXIN1O15169 862 aa9.37□□□□□ -0.91
CCDC40-212ENST00000574799 DFNA5O60443 496 aa9.37□□□□□ -0.91
CCDC40-212ENST00000574799 ERN1O75460 977 aaKnown RBP9.37□□□□□ -0.91
CCDC40-212ENST00000574799 PDE9AO76083 593 aa9.37□□□□□ -0.91
CCDC40-212ENST00000574799 OR7A10O76100 309 aa9.37□□□□□ -0.91
CCDC40-212ENST00000574799 SLITRK5O94991 958 aa9.37□□□□□ -0.91
CCDC40-212ENST00000574799 MYL9P24844 172 aa9.37□□□□□ -0.91
CCDC40-212ENST00000574799 CA5AP35218 305 aa9.37□□□□□ -0.91
CCDC40-212ENST00000574799 PPP3CCP48454 512 aa9.37□□□□□ -0.91
CCDC40-212ENST00000574799 MRPS6P82932 125 aaKnown RBP9.37□□□□□ -0.91
CCDC40-212ENST00000574799 SEMA3BQ13214 749 aa9.37□□□□□ -0.91
CCDC40-212ENST00000574799 SLAMF1Q13291 335 aa9.37□□□□□ -0.91
CCDC40-212ENST00000574799 TIMM50Q3ZCQ8 353 aa9.37□□□□□ -0.91
CCDC40-212ENST00000574799 PYDC2Q56P42 97 aa9.37□□□□□ -0.91
CCDC40-212ENST00000574799 WSCD1Q658N2 575 aa9.37□□□□□ -0.91
CCDC40-212ENST00000574799 ZNF605Q86T29 641 aa9.37□□□□□ -0.91
CCDC40-212ENST00000574799 RTN4RL1Q86UN2 441 aaPredicted RBP9.37□□□□□ -0.91
CCDC40-212ENST00000574799 MFSD6LQ8IWD5 586 aa9.37□□□□□ -0.91
CCDC40-212ENST00000574799 OR9Q1Q8NGQ5 310 aa9.37□□□□□ -0.91
CCDC40-212ENST00000574799 LINC01599Q8WXQ3 324 aa9.37□□□□□ -0.91
CCDC40-212ENST00000574799 NACC2Q96BF6 587 aa9.37□□□□□ -0.91
CCDC40-212ENST00000574799 BTN2A3PQ96KV6 586 aa9.37□□□□□ -0.91
CCDC40-212ENST00000574799 MBOAT4Q96T53 435 aa9.37□□□□□ -0.91
CCDC40-212ENST00000574799 RNF167Q9H6Y7 350 aa9.37□□□□□ -0.91
CCDC40-212ENST00000574799 REEP1Q9H902 201 aa9.37□□□□□ -0.91
CCDC40-212ENST00000574799 ABCB9Q9NP78 766 aa9.37□□□□□ -0.91
CCDC40-212ENST00000574799 ZMYM5Q9UJ78 669 aa9.37□□□□□ -0.91
CCDC40-212ENST00000574799 GRIP1Q9Y3R0 1128 aa9.37□□□□□ -0.91
CCDC40-212ENST00000574799 CD3EAPO15446 510 aaKnown RBP9.37□□□□□ -0.91
CCDC40-212ENST00000574799 TSPAN19P0C672 248 aa9.37□□□□□ -0.91
CCDC40-212ENST00000574799 TKTL1P51854 596 aa9.37□□□□□ -0.91
CCDC40-212ENST00000574799 RAB14P61106 215 aa9.37□□□□□ -0.91
CCDC40-212ENST00000574799 PRKCZQ05513 592 aa9.37□□□□□ -0.91
CCDC40-212ENST00000574799 GPNMBQ14956 572 aa9.37□□□□□ -0.91
CCDC40-212ENST00000574799 BRMS1LQ5PSV4 323 aa9.37□□□□□ -0.91
CCDC40-212ENST00000574799 TRIQKQ629K1 86 aa9.37□□□□□ -0.91
CCDC40-212ENST00000574799 ANGPTL8Q6UXH0 198 aa9.37□□□□□ -0.91
CCDC40-212ENST00000574799 MRPL10Q7Z7H8 261 aaKnown RBP9.37□□□□□ -0.91
CCDC40-212ENST00000574799 PHC2Q8IXK0 858 aa9.37□□□□□ -0.91
CCDC40-212ENST00000574799 UBQLNLQ8IYU4 475 aa9.37□□□□□ -0.91
CCDC40-212ENST00000574799 TP53I13Q8NBR0 393 aaPredicted RBP9.37□□□□□ -0.91
CCDC40-212ENST00000574799 CLHC1Q8NHS4 586 aa9.37□□□□□ -0.91
CCDC40-212ENST00000574799 HCAR2Q8TDS4 363 aa9.37□□□□□ -0.91
CCDC40-212ENST00000574799 TPD52L3Q96J77 140 aa9.37□□□□□ -0.91
CCDC40-212ENST00000574799 SLC2A13Q96QE2 648 aa9.37□□□□□ -0.91
CCDC40-212ENST00000574799 TMEM209Q96SK2 561 aa9.37□□□□□ -0.91
CCDC40-212ENST00000574799 CNPPD1Q9BV87 410 aa9.37□□□□□ -0.91
CCDC40-212ENST00000574799 SLC7A5P2Q9GIP4 190 aa9.37□□□□□ -0.91
CCDC40-212ENST00000574799 CCDC59Q9P031 241 aaKnown RBP9.37□□□□□ -0.91
CCDC40-212ENST00000574799 A0A096LPI6 279 aa9.36□□□□□ -0.91
CCDC40-212ENST00000574799 FAM92AA1XBS5 289 aa9.36□□□□□ -0.91
CCDC40-212ENST00000574799 POLR1CO15160 346 aaPredicted RBP9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms