RNA–Protein interactions for RNA: ENST00000572205.5

SMG6-210, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-210ENST00000572205 FBXO5Q9UKT4 447 aa8.4□□□□□ -1.06
SMG6-210ENST00000572205 IKZF3Q9UKT9 509 aa8.4□□□□□ -1.06
SMG6-210ENST00000572205 CHMP2BQ9UQN3 213 aa8.4□□□□□ -1.06
SMG6-210ENST00000572205 CRYL1Q9Y2S2 319 aa8.4□□□□□ -1.06
SMG6-210ENST00000572205 KLK4Q9Y5K2 254 aa8.4□□□□□ -1.06
SMG6-210ENST00000572205 FASNP49327 2511 aaKnown RBP8.4□□□□□ -1.07
SMG6-210ENST00000572205 PRRC2CQ9Y520 2896 aaKnown RBP8.39□□□□□ -1.07
SMG6-210ENST00000572205 LOC101059948A0A1B0GTJ6 334 aa8.39□□□□□ -1.07
SMG6-210ENST00000572205 UBA6A0AVT1 1052 aaPredicted RBP8.39□□□□□ -1.07
SMG6-210ENST00000572205 MAGEB16A2A368 324 aa8.39□□□□□ -1.07
SMG6-210ENST00000572205 STMND1H3BQB6 276 aa8.39□□□□□ -1.07
SMG6-210ENST00000572205 MYO1CO00159 1063 aa8.39□□□□□ -1.07
SMG6-210ENST00000572205 ZW10O43264 779 aa8.39□□□□□ -1.07
SMG6-210ENST00000572205 NDUFB5O43674 189 aa8.39□□□□□ -1.07
SMG6-210ENST00000572205 RAD1O60671 282 aa8.39□□□□□ -1.07
SMG6-210ENST00000572205 PSIP1O75475 530 aaKnown RBP8.39□□□□□ -1.07
SMG6-210ENST00000572205 STK17BO94768 372 aa8.39□□□□□ -1.07
SMG6-210ENST00000572205 HAUS5O94927 633 aa8.39□□□□□ -1.07
SMG6-210ENST00000572205 CAPN1P07384 714 aa8.39□□□□□ -1.07
SMG6-210ENST00000572205 CHRM5P08912 532 aaPredicted RBP8.39□□□□□ -1.07
SMG6-210ENST00000572205 ERVK-10P10266 1014 aa8.39□□□□□ -1.07
SMG6-210ENST00000572205 LIFP15018 202 aa8.39□□□□□ -1.07
SMG6-210ENST00000572205 AMD1P17707 334 aa8.39□□□□□ -1.07
SMG6-210ENST00000572205 PSMB5P28074 263 aa8.39□□□□□ -1.07
SMG6-210ENST00000572205 FMO4P31512 558 aa8.39□□□□□ -1.07
SMG6-210ENST00000572205 RORAP35398 523 aa8.39□□□□□ -1.07
SMG6-210ENST00000572205 STAT5AP42229 794 aa8.39□□□□□ -1.07
SMG6-210ENST00000572205 RAB28P51157 221 aa8.39□□□□□ -1.07
SMG6-210ENST00000572205 CDKN2DP55273 166 aa8.39□□□□□ -1.07
SMG6-210ENST00000572205 SARNPP82979 210 aaKnown RBP8.39□□□□□ -1.07
SMG6-210ENST00000572205 BIRC2Q13490 618 aa8.39□□□□□ -1.07
SMG6-210ENST00000572205 CUL1Q13616 776 aa8.39□□□□□ -1.07
SMG6-210ENST00000572205 MAP7Q14244 749 aa8.39□□□□□ -1.07
SMG6-210ENST00000572205 GPR19Q15760 415 aa8.39□□□□□ -1.07
SMG6-210ENST00000572205 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.39□□□□□ -1.07
SMG6-210ENST00000572205 SPANXN3Q5MJ09 141 aa8.39□□□□□ -1.07
SMG6-210ENST00000572205 DNTTIP2Q5QJE6 756 aaKnown RBP8.39□□□□□ -1.07
SMG6-210ENST00000572205 TEDDM1Q5T9Z0 273 aa8.39□□□□□ -1.07
SMG6-210ENST00000572205 PRAMEF17Q5VTA0 474 aa8.39□□□□□ -1.07
SMG6-210ENST00000572205 PWWP2BQ6NUJ5 590 aa8.39□□□□□ -1.07
SMG6-210ENST00000572205 CASC4Q6P4E1 433 aa8.39□□□□□ -1.07
SMG6-210ENST00000572205 SPESP1Q6UW49 350 aa8.39□□□□□ -1.07
SMG6-210ENST00000572205 THSD4Q6ZMP0 1018 aa8.39□□□□□ -1.07
SMG6-210ENST00000572205 CDHR3Q6ZTQ4 885 aa8.39□□□□□ -1.07
SMG6-210ENST00000572205 AMIGO1Q86WK6 493 aa8.39□□□□□ -1.07
SMG6-210ENST00000572205 KMT5CQ86Y97 462 aa8.39□□□□□ -1.07
SMG6-210ENST00000572205 TMEM151BQ8IW70 566 aa8.39□□□□□ -1.07
SMG6-210ENST00000572205 DCUN1D3Q8IWE4 304 aa8.39□□□□□ -1.07
SMG6-210ENST00000572205 FAM20CQ8IXL6 584 aa8.39□□□□□ -1.07
SMG6-210ENST00000572205 LMNTD2Q8IXW0 634 aa8.39□□□□□ -1.07
SMG6-210ENST00000572205 SIDT2Q8NBJ9 832 aaKnown RBP8.39□□□□□ -1.07
SMG6-210ENST00000572205 ASZ1Q8WWH4 475 aa8.39□□□□□ -1.07
SMG6-210ENST00000572205 LCN9Q8WX39 176 aa8.39□□□□□ -1.07
SMG6-210ENST00000572205 ANP32BQ92688 251 aaKnown RBP8.39□□□□□ -1.07
SMG6-210ENST00000572205 ZDHHC12Q96GR4 267 aa8.39□□□□□ -1.07
SMG6-210ENST00000572205 RUNDC3BQ96NL0 473 aa8.39□□□□□ -1.07
SMG6-210ENST00000572205 TEFMQ96QE5 360 aaKnown RBP8.39□□□□□ -1.07
SMG6-210ENST00000572205 OR6C1Q96RD1 312 aa8.39□□□□□ -1.07
SMG6-210ENST00000572205 FERD3LQ96RJ6 166 aa8.39□□□□□ -1.07
SMG6-210ENST00000572205 RUFY1Q96T51 708 aa8.39□□□□□ -1.07
SMG6-210ENST00000572205 OLFM1Q99784 485 aa8.39□□□□□ -1.07
SMG6-210ENST00000572205 ERP44Q9BS26 406 aa8.39□□□□□ -1.07
SMG6-210ENST00000572205 AARSD1Q9BTE6 412 aaKnown RBP8.39□□□□□ -1.07
SMG6-210ENST00000572205 SLC12A9Q9BXP2 914 aa8.39□□□□□ -1.07
SMG6-210ENST00000572205 TRIT1Q9H3H1 467 aaKnown RBP8.39□□□□□ -1.07
SMG6-210ENST00000572205 C1GALT1Q9NS00 363 aa8.39□□□□□ -1.07
SMG6-210ENST00000572205 ZDHHC18Q9NUE0 388 aa8.39□□□□□ -1.07
SMG6-210ENST00000572205 ACTR10Q9NZ32 417 aa8.39□□□□□ -1.07
SMG6-210ENST00000572205 ASF1AQ9Y294 204 aa8.39□□□□□ -1.07
SMG6-210ENST00000572205 SNX24Q9Y343 169 aa8.39□□□□□ -1.07
SMG6-210ENST00000572205 MRFAP1Q9Y605 127 aa8.39□□□□□ -1.07
SMG6-210ENST00000572205 COLEC10Q9Y6Z7 277 aa8.39□□□□□ -1.07
SMG6-210ENST00000572205 IGKV1-8A0A0C4DH67 115 aa8.38□□□□□ -1.07
SMG6-210ENST00000572205 FAM187AA6NFU0 413 aa8.38□□□□□ -1.07
SMG6-210ENST00000572205 SLC9B1P1A6NJY1 282 aa8.38□□□□□ -1.07
SMG6-210ENST00000572205 EFCAB8A8MWE9 144 aa8.38□□□□□ -1.07
SMG6-210ENST00000572205 MATN2O00339 956 aa8.38□□□□□ -1.07
SMG6-210ENST00000572205 IFRD1O00458 451 aaPredicted RBP8.38□□□□□ -1.07
SMG6-210ENST00000572205 RASGRF2O14827 1237 aa8.38□□□□□ -1.07
SMG6-210ENST00000572205 RRP8O43159 456 aaKnown RBP8.38□□□□□ -1.07
SMG6-210ENST00000572205 NDUFS3O75489 264 aa8.38□□□□□ -1.07
SMG6-210ENST00000572205 ZBTB11O95625 1053 aaPredicted RBP8.38□□□□□ -1.07
SMG6-210ENST00000572205 AHSGP02765 367 aa8.38□□□□□ -1.07
SMG6-210ENST00000572205 ITGAXP20702 1163 aa8.38□□□□□ -1.07
SMG6-210ENST00000572205 CD9P21926 228 aa8.38□□□□□ -1.07
SMG6-210ENST00000572205 FDXRP22570 491 aa8.38□□□□□ -1.07
SMG6-210ENST00000572205 SHMT2P34897 504 aa8.38□□□□□ -1.07
SMG6-210ENST00000572205 CSRP3P50461 194 aa8.38□□□□□ -1.07
SMG6-210ENST00000572205 TMPRSS3P57727 454 aa8.38□□□□□ -1.07
SMG6-210ENST00000572205 GPX6P59796 221 aa8.38□□□□□ -1.07
SMG6-210ENST00000572205 SNRPNP63162 240 aaKnown RBP8.38□□□□□ -1.07
SMG6-210ENST00000572205 PLOD1Q02809 727 aaPredicted RBP8.38□□□□□ -1.07
SMG6-210ENST00000572205 GUCY2DQ02846 1103 aa8.38□□□□□ -1.07
SMG6-210ENST00000572205 TUBB3Q13509 450 aa8.38□□□□□ -1.07
SMG6-210ENST00000572205 FASTKQ14296 549 aaKnown RBP8.38□□□□□ -1.07
SMG6-210ENST00000572205 HIF1AQ16665 826 aa8.38□□□□□ -1.07
SMG6-210ENST00000572205 CYP2A13Q16696 494 aa8.38□□□□□ -1.07
SMG6-210ENST00000572205 SLC5A12Q1EHB4 618 aa8.38□□□□□ -1.07
SMG6-210ENST00000572205 BBS9Q3SYG4 887 aa8.38□□□□□ -1.07
SMG6-210ENST00000572205 SYTL3Q4VX76 610 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms