RNA–Protein interactions for RNA: ENST00000569422.1

LINC00558-201, long intergenic non-protein coding RNA 558, humanhuman

TSL 1 (best) BASIC

Gene LINC00558, Length 3,163 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00558-201ENST00000569422 LAPTM4AQ15012 233 aa8.55□□□□□ -1.04
LINC00558-201ENST00000569422 ATP6AP1Q15904 470 aa8.55□□□□□ -1.04
LINC00558-201ENST00000569422 ZNF697Q5TEC3 545 aa8.55□□□□□ -1.04
LINC00558-201ENST00000569422 CACHD1Q5VU97 1274 aa8.55□□□□□ -1.04
LINC00558-201ENST00000569422 GRAMD4Q6IC98 578 aa8.55□□□□□ -1.04
LINC00558-201ENST00000569422 SLC39A5Q6ZMH5 540 aa8.55□□□□□ -1.04
LINC00558-201ENST00000569422 GALNT10Q86SR1 603 aa8.55□□□□□ -1.04
LINC00558-201ENST00000569422 OR8H2Q8N162 312 aa8.55□□□□□ -1.04
LINC00558-201ENST00000569422 LMNTD1Q8N9Z9 388 aa8.55□□□□□ -1.04
LINC00558-201ENST00000569422 B4GALNT2Q8NHY0 566 aa8.55□□□□□ -1.04
LINC00558-201ENST00000569422 ACDQ96AP0 544 aa8.55□□□□□ -1.04
LINC00558-201ENST00000569422 TCEAL4Q96EI5 215 aa8.55□□□□□ -1.04
LINC00558-201ENST00000569422 DUS3LQ96G46 650 aaKnown RBP8.55□□□□□ -1.04
LINC00558-201ENST00000569422 MOGAT1Q96PD6 335 aa8.55□□□□□ -1.04
LINC00558-201ENST00000569422 ADNPQ9H2P0 1102 aa8.55□□□□□ -1.04
LINC00558-201ENST00000569422 LINC00597Q9H2U6 94 aa8.55□□□□□ -1.04
LINC00558-201ENST00000569422 SUV39H2Q9H5I1 410 aa8.55□□□□□ -1.04
LINC00558-201ENST00000569422 CARS2Q9HA77 564 aaKnown RBP8.55□□□□□ -1.04
LINC00558-201ENST00000569422 SMPD3Q9NY59 655 aaPredicted RBP8.55□□□□□ -1.04
LINC00558-201ENST00000569422 DLGAP4Q9Y2H0 992 aa8.55□□□□□ -1.04
LINC00558-201ENST00000569422 CEPT1Q9Y6K0 416 aa8.55□□□□□ -1.04
LINC00558-201ENST00000569422 FNDC1Q4ZHG4 1894 aaPredicted RBP8.55□□□□□ -1.04
LINC00558-201ENST00000569422 TMX2-CTNND1H3BSU7 103 aa8.55□□□□□ -1.04
LINC00558-201ENST00000569422 MANBAO00462 879 aa8.55□□□□□ -1.04
LINC00558-201ENST00000569422 RFPL2O75678 378 aa8.55□□□□□ -1.04
LINC00558-201ENST00000569422 ALBP02768 609 aa8.55□□□□□ -1.04
LINC00558-201ENST00000569422 ANXA6P08133 673 aa8.55□□□□□ -1.04
LINC00558-201ENST00000569422 HIST1H2AGP0C0S8 130 aaPredicted RBP8.55□□□□□ -1.04
LINC00558-201ENST00000569422 HIST1H2ADP20671 130 aa8.55□□□□□ -1.04
LINC00558-201ENST00000569422 TACR1P25103 407 aa8.55□□□□□ -1.04
LINC00558-201ENST00000569422 PBLDP30039 288 aaPredicted RBP8.55□□□□□ -1.04
LINC00558-201ENST00000569422 S100A5P33763 92 aa8.55□□□□□ -1.04
LINC00558-201ENST00000569422 ADARP55265 1226 aaKnown RBP8.55□□□□□ -1.04
LINC00558-201ENST00000569422 B4GALNT1Q00973 533 aa8.55□□□□□ -1.04
LINC00558-201ENST00000569422 FOXM1Q08050 763 aa8.55□□□□□ -1.04
LINC00558-201ENST00000569422 ABRQ12979 859 aa8.55□□□□□ -1.04
LINC00558-201ENST00000569422 SP140Q13342 867 aa8.55□□□□□ -1.04
LINC00558-201ENST00000569422 DYNC1I2Q13409 638 aaKnown RBP8.55□□□□□ -1.04
LINC00558-201ENST00000569422 PWP1Q13610 501 aa8.55□□□□□ -1.04
LINC00558-201ENST00000569422 TTLL9Q3SXZ7 439 aa8.55□□□□□ -1.04
LINC00558-201ENST00000569422 MPPE1Q53F39 396 aa8.55□□□□□ -1.04
LINC00558-201ENST00000569422 SULT1C3Q6IMI6 304 aa8.55□□□□□ -1.04
LINC00558-201ENST00000569422 Q6ZNB5 142 aa8.55□□□□□ -1.04
LINC00558-201ENST00000569422 BPHLQ86WA6 291 aaPredicted RBP8.55□□□□□ -1.04
LINC00558-201ENST00000569422 TCEAL8Q8IYN2 117 aa8.55□□□□□ -1.04
LINC00558-201ENST00000569422 RNF168Q8IYW5 571 aaPredicted RBP8.55□□□□□ -1.04
LINC00558-201ENST00000569422 TBC1D21Q8IYX1 336 aa8.55□□□□□ -1.04
LINC00558-201ENST00000569422 TMCO5AQ8N6Q1 288 aa8.55□□□□□ -1.04
LINC00558-201ENST00000569422 PDPRQ8NCN5 879 aa8.55□□□□□ -1.04
LINC00558-201ENST00000569422 PNPT1Q8TCS8 783 aaKnown RBP8.55□□□□□ -1.04
LINC00558-201ENST00000569422 TMBIM1Q969X1 311 aa8.55□□□□□ -1.04
LINC00558-201ENST00000569422 HIST1H2AHQ96KK5 128 aa8.55□□□□□ -1.04
LINC00558-201ENST00000569422 APOLD1Q96LR9 279 aa8.55□□□□□ -1.04
LINC00558-201ENST00000569422 MUS81Q96NY9 551 aa8.55□□□□□ -1.04
LINC00558-201ENST00000569422 HIST1H2AJQ99878 128 aa8.55□□□□□ -1.04
LINC00558-201ENST00000569422 H2AFJQ9BTM1 129 aa8.55□□□□□ -1.04
LINC00558-201ENST00000569422 BDH2Q9BUT1 245 aa8.55□□□□□ -1.04
LINC00558-201ENST00000569422 ING2Q9H160 280 aa8.55□□□□□ -1.04
LINC00558-201ENST00000569422 BRD9Q9H8M2 597 aa8.55□□□□□ -1.04
LINC00558-201ENST00000569422 EXD2Q9NVH0 621 aa8.55□□□□□ -1.04
LINC00558-201ENST00000569422 B4GALT6Q9UBX8 382 aa8.55□□□□□ -1.04
LINC00558-201ENST00000569422 ZNF69Q9UC07 566 aa8.55□□□□□ -1.04
LINC00558-201ENST00000569422 EBF1Q9UH73 591 aa8.55□□□□□ -1.04
LINC00558-201ENST00000569422 RSL24D1Q9UHA3 163 aaKnown RBP8.55□□□□□ -1.04
LINC00558-201ENST00000569422 PDE10AQ9Y233 779 aa8.55□□□□□ -1.04
LINC00558-201ENST00000569422 CXCL14O95715 111 aa8.55□□□□□ -1.04
LINC00558-201ENST00000569422 CST1P01037 141 aa8.55□□□□□ -1.04
LINC00558-201ENST00000569422 ITGB8P26012 769 aa8.55□□□□□ -1.04
LINC00558-201ENST00000569422 CCR2P41597 374 aa8.55□□□□□ -1.04
LINC00558-201ENST00000569422 NSG1P42857 185 aa8.55□□□□□ -1.04
LINC00558-201ENST00000569422 CBX2Q14781 532 aaPredicted RBP8.55□□□□□ -1.04
LINC00558-201ENST00000569422 PTCHD3Q3KNS1 767 aa8.55□□□□□ -1.04
LINC00558-201ENST00000569422 FAM98BQ52LJ0 330 aaKnown RBP8.55□□□□□ -1.04
LINC00558-201ENST00000569422 ANKRD39Q53RE8 183 aa8.55□□□□□ -1.04
LINC00558-201ENST00000569422 COQ5Q5HYK3 327 aa8.55□□□□□ -1.04
LINC00558-201ENST00000569422 ASTLQ6HA08 431 aaPredicted RBP8.55□□□□□ -1.04
LINC00558-201ENST00000569422 ZNF783Q6ZMS7 281 aa8.55□□□□□ -1.04
LINC00558-201ENST00000569422 USP45Q70EL2 814 aa8.55□□□□□ -1.04
LINC00558-201ENST00000569422 C10orf111Q8N326 155 aa8.55□□□□□ -1.04
LINC00558-201ENST00000569422 NCSTNQ92542 709 aa8.55□□□□□ -1.04
LINC00558-201ENST00000569422 GTF2H4Q92759 462 aa8.55□□□□□ -1.04
LINC00558-201ENST00000569422 MED8Q96G25 268 aa8.55□□□□□ -1.04
LINC00558-201ENST00000569422 RBM18Q96H35 190 aaKnown RBP8.55□□□□□ -1.04
LINC00558-201ENST00000569422 ZNF583Q96ND8 569 aa8.55□□□□□ -1.04
LINC00558-201ENST00000569422 INPP5KQ9BT40 448 aa8.55□□□□□ -1.04
LINC00558-201ENST00000569422 HTATIP2Q9BUP3 242 aa8.55□□□□□ -1.04
LINC00558-201ENST00000569422 ACPTQ9BZG2 426 aa8.55□□□□□ -1.04
LINC00558-201ENST00000569422 RBM38Q9H0Z9 239 aaKnown RBP8.55□□□□□ -1.04
LINC00558-201ENST00000569422 HEBP1Q9NRV9 189 aa8.55□□□□□ -1.04
LINC00558-201ENST00000569422 VPS4AQ9UN37 437 aa8.55□□□□□ -1.04
LINC00558-201ENST00000569422 CDC14AQ9UNH5 594 aa8.55□□□□□ -1.04
LINC00558-201ENST00000569422 SLC8A2Q9UPR5 921 aa8.55□□□□□ -1.04
LINC00558-201ENST00000569422 TRAV19A0A0A6YYK7 116 aa8.54□□□□□ -1.04
LINC00558-201ENST00000569422 ANKRD28O15084 1053 aa8.54□□□□□ -1.04
LINC00558-201ENST00000569422 TRMUO75648 421 aaKnown RBP8.54□□□□□ -1.04
LINC00558-201ENST00000569422 PRKD3O94806 890 aa8.54□□□□□ -1.04
LINC00558-201ENST00000569422 RASAL1O95294 804 aa8.54□□□□□ -1.04
LINC00558-201ENST00000569422 CLDN9O95484 217 aa8.54□□□□□ -1.04
LINC00558-201ENST00000569422 CXCL10P02778 98 aa8.54□□□□□ -1.04
LINC00558-201ENST00000569422 BCKDHAP12694 445 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms