RNA–Protein interactions for RNA: ENST00000568569.1

GTF3C1-209, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-209ENST00000568569 UNC5CO95185 931 aa11.31□□□□□ -0.6
GTF3C1-209ENST00000568569 HPP00738 406 aa11.31□□□□□ -0.6
GTF3C1-209ENST00000568569 GYPCP04921 128 aa11.31□□□□□ -0.6
GTF3C1-209ENST00000568569 TNNT1P13805 278 aa11.31□□□□□ -0.6
GTF3C1-209ENST00000568569 ACPPP15309 386 aa11.31□□□□□ -0.6
GTF3C1-209ENST00000568569 MAGP20916 626 aa11.31□□□□□ -0.6
GTF3C1-209ENST00000568569 ACADLP28330 430 aa11.31□□□□□ -0.6
GTF3C1-209ENST00000568569 PEBP1P30086 187 aaKnown RBP11.31□□□□□ -0.6
GTF3C1-209ENST00000568569 SSTR2P30874 369 aa11.31□□□□□ -0.6
GTF3C1-209ENST00000568569 MC4RP32245 332 aa11.31□□□□□ -0.6
GTF3C1-209ENST00000568569 ADRA1AP35348 466 aa11.31□□□□□ -0.6
GTF3C1-209ENST00000568569 SLC1A1P43005 524 aa11.31□□□□□ -0.6
GTF3C1-209ENST00000568569 CA7P43166 264 aa11.31□□□□□ -0.6
GTF3C1-209ENST00000568569 CARSP49589 748 aaKnown RBP11.31□□□□□ -0.6
GTF3C1-209ENST00000568569 TNFSF10P50591 281 aa11.31□□□□□ -0.6
GTF3C1-209ENST00000568569 GRM7Q14831 915 aa11.31□□□□□ -0.6
GTF3C1-209ENST00000568569 ITPRIPL1Q6GPH6 555 aa11.31□□□□□ -0.6
GTF3C1-209ENST00000568569 XKRXQ6PP77 449 aa11.31□□□□□ -0.6
GTF3C1-209ENST00000568569 NLRP9Q7RTR0 991 aa11.31□□□□□ -0.6
GTF3C1-209ENST00000568569 MCATQ8IVS2 390 aaKnown RBP11.31□□□□□ -0.6
GTF3C1-209ENST00000568569 CLDN19Q8N6F1 224 aa11.31□□□□□ -0.6
GTF3C1-209ENST00000568569 OR5K2Q8NHB8 316 aa11.31□□□□□ -0.6
GTF3C1-209ENST00000568569 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.31□□□□□ -0.6
GTF3C1-209ENST00000568569 HAUS1Q96CS2 278 aa11.31□□□□□ -0.6
GTF3C1-209ENST00000568569 APOL2Q9BQE5 337 aa11.31□□□□□ -0.6
GTF3C1-209ENST00000568569 GORASP1Q9BQQ3 440 aa11.31□□□□□ -0.6
GTF3C1-209ENST00000568569 CRB3Q9BUF7 120 aa11.31□□□□□ -0.6
GTF3C1-209ENST00000568569 CUTCQ9NTM9 273 aa11.31□□□□□ -0.6
GTF3C1-209ENST00000568569 IL1RAPL1Q9NZN1 696 aa11.31□□□□□ -0.6
GTF3C1-209ENST00000568569 AAR2Q9Y312 384 aaKnown RBP11.31□□□□□ -0.6
GTF3C1-209ENST00000568569 DOCK10Q96BY6 2186 aa11.31□□□□□ -0.6
GTF3C1-209ENST00000568569 CCDC88CQ9P219 2028 aa11.3□□□□□ -0.6
GTF3C1-209ENST00000568569 VSTM2BA6NLU5 285 aa11.3□□□□□ -0.6
GTF3C1-209ENST00000568569 QSOX1O00391 747 aa11.3□□□□□ -0.6
GTF3C1-209ENST00000568569 CCL22O00626 93 aa11.3□□□□□ -0.6
GTF3C1-209ENST00000568569 MAP2K7O14733 419 aa11.3□□□□□ -0.6
GTF3C1-209ENST00000568569 SPOPO43791 374 aa11.3□□□□□ -0.6
GTF3C1-209ENST00000568569 AP2A2O94973 939 aa11.3□□□□□ -0.6
GTF3C1-209ENST00000568569 AP2A1O95782 977 aa11.3□□□□□ -0.6
GTF3C1-209ENST00000568569 TPBGLP0DKB5 382 aa11.3□□□□□ -0.6
GTF3C1-209ENST00000568569 FDXRP22570 491 aa11.3□□□□□ -0.6
GTF3C1-209ENST00000568569 CDKN1CP49918 316 aaPredicted RBP11.3□□□□□ -0.6
GTF3C1-209ENST00000568569 PLOD1Q02809 727 aaPredicted RBP11.3□□□□□ -0.6
GTF3C1-209ENST00000568569 RBPJQ06330 500 aa11.3□□□□□ -0.6
GTF3C1-209ENST00000568569 MSLNQ13421 630 aaPredicted RBP11.3□□□□□ -0.6
GTF3C1-209ENST00000568569 OLIG2Q13516 323 aa11.3□□□□□ -0.6
GTF3C1-209ENST00000568569 TESK1Q15569 626 aa11.3□□□□□ -0.6
GTF3C1-209ENST00000568569 TFDP3Q5H9I0 405 aa11.3□□□□□ -0.6
GTF3C1-209ENST00000568569 ZC3H12BQ5HYM0 836 aaKnown RBP11.3□□□□□ -0.6
GTF3C1-209ENST00000568569 TCTE1Q5JU00 501 aa11.3□□□□□ -0.6
GTF3C1-209ENST00000568569 SPNS3Q6ZMD2 512 aa11.3□□□□□ -0.6
GTF3C1-209ENST00000568569 RHOT2Q8IXI1 618 aa11.3□□□□□ -0.6
GTF3C1-209ENST00000568569 FAM20CQ8IXL6 584 aa11.3□□□□□ -0.6
GTF3C1-209ENST00000568569 KBTBD2Q8IY47 623 aa11.3□□□□□ -0.6
GTF3C1-209ENST00000568569 TTC29Q8NA56 475 aaPredicted RBP11.3□□□□□ -0.6
GTF3C1-209ENST00000568569 CCDC110Q8TBZ0 833 aa11.3□□□□□ -0.6
GTF3C1-209ENST00000568569 SLC22A18Q96BI1 424 aa11.3□□□□□ -0.6
GTF3C1-209ENST00000568569 GBP4Q96PP9 640 aa11.3□□□□□ -0.6
GTF3C1-209ENST00000568569 FERMT1Q9BQL6 677 aa11.3□□□□□ -0.6
GTF3C1-209ENST00000568569 ZNF160Q9HCG1 818 aa11.3□□□□□ -0.6
GTF3C1-209ENST00000568569 LUC7LQ9NQ29 371 aaKnown RBP11.3□□□□□ -0.6
GTF3C1-209ENST00000568569 INTS7Q9NVH2 962 aaKnown RBP11.3□□□□□ -0.6
GTF3C1-209ENST00000568569 ABI3Q9P2A4 366 aa11.3□□□□□ -0.6
GTF3C1-209ENST00000568569 PTGFRNQ9P2B2 879 aa11.3□□□□□ -0.6
GTF3C1-209ENST00000568569 SEC14L3Q9UDX4 400 aa11.3□□□□□ -0.6
GTF3C1-209ENST00000568569 FEZ2Q9UHY8 353 aaPredicted RBP11.3□□□□□ -0.6
GTF3C1-209ENST00000568569 PLAGL1Q9UM63 463 aa11.3□□□□□ -0.6
GTF3C1-209ENST00000568569 GOLGA6L22H0YM25 854 aa11.29□□□□□ -0.6
GTF3C1-209ENST00000568569 H7C0S8 307 aa11.29□□□□□ -0.6
GTF3C1-209ENST00000568569 KCNN4O15554 427 aa11.29□□□□□ -0.6
GTF3C1-209ENST00000568569 PSTPIP1O43586 416 aa11.29□□□□□ -0.6
GTF3C1-209ENST00000568569 RASAL1O95294 804 aa11.29□□□□□ -0.6
GTF3C1-209ENST00000568569 MBD3O95983 291 aa11.29□□□□□ -0.6
GTF3C1-209ENST00000568569 CRYABP02511 175 aaKnown RBP11.29□□□□□ -0.6
GTF3C1-209ENST00000568569 FTH1P02794 183 aa11.29□□□□□ -0.6
GTF3C1-209ENST00000568569 AGAP20933 346 aa11.29□□□□□ -0.6
GTF3C1-209ENST00000568569 MCM3P25205 808 aa11.29□□□□□ -0.6
GTF3C1-209ENST00000568569 PKLRP30613 574 aa11.29□□□□□ -0.6
GTF3C1-209ENST00000568569 SOX11P35716 441 aa11.29□□□□□ -0.6
GTF3C1-209ENST00000568569 NSG1P42857 185 aa11.29□□□□□ -0.6
GTF3C1-209ENST00000568569 OR1D4P47884 311 aa11.29□□□□□ -0.6
GTF3C1-209ENST00000568569 RAB28P51157 221 aa11.29□□□□□ -0.6
GTF3C1-209ENST00000568569 CASP6P55212 293 aa11.29□□□□□ -0.6
GTF3C1-209ENST00000568569 UBASH3AP57075 661 aa11.29□□□□□ -0.6
GTF3C1-209ENST00000568569 PRPSAP1Q14558 356 aa11.29□□□□□ -0.6
GTF3C1-209ENST00000568569 BRD3Q15059 726 aa11.29□□□□□ -0.6
GTF3C1-209ENST00000568569 ASTE1Q2TB18 679 aaPredicted RBP11.29□□□□□ -0.6
GTF3C1-209ENST00000568569 SYTL3Q4VX76 610 aa11.29□□□□□ -0.6
GTF3C1-209ENST00000568569 TAS2R42Q7RTR8 314 aa11.29□□□□□ -0.6
GTF3C1-209ENST00000568569 TMTC1Q8IUR5 882 aa11.29□□□□□ -0.6
GTF3C1-209ENST00000568569 ZNF295-AS1Q8N0V1 137 aa11.29□□□□□ -0.6
GTF3C1-209ENST00000568569 METTL27Q8N6F8 245 aaPredicted RBP11.29□□□□□ -0.6
GTF3C1-209ENST00000568569 DNAJB8Q8NHS0 232 aa11.29□□□□□ -0.6
GTF3C1-209ENST00000568569 BRIX1Q8TDN6 353 aaKnown RBP11.29□□□□□ -0.6
GTF3C1-209ENST00000568569 ELMO1Q92556 727 aa11.29□□□□□ -0.6
GTF3C1-209ENST00000568569 HAS2Q92819 552 aa11.29□□□□□ -0.6
GTF3C1-209ENST00000568569 DNAJC1Q96KC8 554 aaKnown RBP11.29□□□□□ -0.6
GTF3C1-209ENST00000568569 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.29□□□□□ -0.6
GTF3C1-209ENST00000568569 ENAMQ9NRM1 1142 aa11.29□□□□□ -0.6
GTF3C1-209ENST00000568569 SMARCAL1Q9NZC9 954 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms