RNA–Protein interactions for RNA: ENST00000566843.1

COMMD4-215, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-215ENST00000566843 CEP295NLQ96MC4 621 aa15.32■□□□□ 0.04
COMMD4-215ENST00000566843 EMILIN2Q9BXX0 1053 aa15.32■□□□□ 0.04
COMMD4-215ENST00000566843 TNKS2Q9H2K2 1166 aa15.32■□□□□ 0.04
COMMD4-215ENST00000566843 NPAP1Q9NZP6 1156 aa15.32■□□□□ 0.04
COMMD4-215ENST00000566843 CCDC59Q9P031 241 aaKnown RBP15.32■□□□□ 0.04
COMMD4-215ENST00000566843 A0A096LPI6 279 aa15.32■□□□□ 0.04
COMMD4-215ENST00000566843 M0R082 166 aa15.32■□□□□ 0.04
COMMD4-215ENST00000566843 WNT9AO14904 365 aa15.32■□□□□ 0.04
COMMD4-215ENST00000566843 RAD51BO15315 384 aa15.32■□□□□ 0.04
COMMD4-215ENST00000566843 AIREO43918 545 aa15.32■□□□□ 0.04
COMMD4-215ENST00000566843 SNX4O95219 450 aa15.32■□□□□ 0.04
COMMD4-215ENST00000566843 FPR1P21462 350 aa15.32■□□□□ 0.04
COMMD4-215ENST00000566843 ACVRL1P37023 503 aa15.32■□□□□ 0.04
COMMD4-215ENST00000566843 YBEYP58557 167 aaPredicted RBP15.32■□□□□ 0.04
COMMD4-215ENST00000566843 TPRG1LQ5T0D9 272 aa15.32■□□□□ 0.04
COMMD4-215ENST00000566843 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.32■□□□□ 0.04
COMMD4-215ENST00000566843 KIAA1614Q5VZ46 1190 aa15.32■□□□□ 0.04
COMMD4-215ENST00000566843 FBXL22Q6P050 247 aa15.32■□□□□ 0.04
COMMD4-215ENST00000566843 MILR1Q7Z6M3 343 aa15.32■□□□□ 0.04
COMMD4-215ENST00000566843 PIANPQ8IYJ0 282 aa15.32■□□□□ 0.04
COMMD4-215ENST00000566843 LIX1Q8N485 282 aa15.32■□□□□ 0.04
COMMD4-215ENST00000566843 KCNH6Q9H252 994 aa15.32■□□□□ 0.04
COMMD4-215ENST00000566843 ABHD16BQ9H3Z7 469 aa15.32■□□□□ 0.04
COMMD4-215ENST00000566843 PDFQ9HBH1 243 aa15.32■□□□□ 0.04
COMMD4-215ENST00000566843 ZBTB20Q9HC78 741 aaPredicted RBP15.32■□□□□ 0.04
COMMD4-215ENST00000566843 FAM105AQ9NUU6 356 aa15.32■□□□□ 0.04
COMMD4-215ENST00000566843 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.32■□□□□ 0.04
COMMD4-215ENST00000566843 COMMD10Q9Y6G5 202 aa15.32■□□□□ 0.04
COMMD4-215ENST00000566843 FAM172BPA6NC97 362 aa15.31■□□□□ 0.04
COMMD4-215ENST00000566843 ARL5CA6NH57 179 aa15.31■□□□□ 0.04
COMMD4-215ENST00000566843 ARVCFO00192 962 aa15.31■□□□□ 0.04
COMMD4-215ENST00000566843 HAS3O00219 553 aa15.31■□□□□ 0.04
COMMD4-215ENST00000566843 DSCR3O14972 297 aa15.31■□□□□ 0.04
COMMD4-215ENST00000566843 SEMG1P04279 462 aa15.31■□□□□ 0.04
COMMD4-215ENST00000566843 DNAJA1P31689 397 aaKnown RBP15.31■□□□□ 0.04
COMMD4-215ENST00000566843 GGT5P36269 586 aa15.31■□□□□ 0.04
COMMD4-215ENST00000566843 ARL1P40616 181 aaPredicted RBP15.31■□□□□ 0.04
COMMD4-215ENST00000566843 ARHGDIAP52565 204 aa15.31■□□□□ 0.04
COMMD4-215ENST00000566843 FAM110CQ1W6H9 321 aa15.31■□□□□ 0.04
COMMD4-215ENST00000566843 GDPD3Q7L5L3 318 aa15.31■□□□□ 0.04
COMMD4-215ENST00000566843 ELMOD1Q8N336 334 aa15.31■□□□□ 0.04
COMMD4-215ENST00000566843 PARP16Q8N5Y8 322 aa15.31■□□□□ 0.04
COMMD4-215ENST00000566843 IL17RDQ8NFM7 739 aa15.31■□□□□ 0.04
COMMD4-215ENST00000566843 MDGA1Q8NFP4 955 aa15.31■□□□□ 0.04
COMMD4-215ENST00000566843 APH1BQ8WW43 257 aa15.31■□□□□ 0.04
COMMD4-215ENST00000566843 OR52E6Q96RD3 313 aa15.31■□□□□ 0.04
COMMD4-215ENST00000566843 CDADC1Q9BWV3 514 aa15.31■□□□□ 0.04
COMMD4-215ENST00000566843 OR2B2Q9GZK3 357 aa15.31■□□□□ 0.04
COMMD4-215ENST00000566843 NACA2Q9H009 215 aa15.31■□□□□ 0.04
COMMD4-215ENST00000566843 IL1RAPQ9NPH3 570 aa15.31■□□□□ 0.04
COMMD4-215ENST00000566843 SERHLQ9NQF3 203 aa15.31■□□□□ 0.04
COMMD4-215ENST00000566843 ABCG2Q9UNQ0 655 aa15.31■□□□□ 0.04
COMMD4-215ENST00000566843 SAMD4AQ9UPU9 718 aaKnown RBP15.31■□□□□ 0.04
COMMD4-215ENST00000566843 CENPBD1B2RD01 187 aa15.31■□□□□ 0.04
COMMD4-215ENST00000566843 M0QZQ0 153 aa15.31■□□□□ 0.04
COMMD4-215ENST00000566843 PER2O15055 1255 aa15.31■□□□□ 0.04
COMMD4-215ENST00000566843 CA12O43570 354 aa15.31■□□□□ 0.04
COMMD4-215ENST00000566843 OR1I1O60431 355 aa15.31■□□□□ 0.04
COMMD4-215ENST00000566843 ETV6P41212 452 aa15.31■□□□□ 0.04
COMMD4-215ENST00000566843 CTSKP43235 329 aa15.31■□□□□ 0.04
COMMD4-215ENST00000566843 BRCC3P46736 316 aa15.31■□□□□ 0.04
COMMD4-215ENST00000566843 TTPAP49638 278 aa15.31■□□□□ 0.04
COMMD4-215ENST00000566843 PSEN2P49810 448 aa15.31■□□□□ 0.04
COMMD4-215ENST00000566843 ABHD18Q0P651 414 aa15.31■□□□□ 0.04
COMMD4-215ENST00000566843 CACHD1Q5VU97 1274 aa15.31■□□□□ 0.04
COMMD4-215ENST00000566843 AGAP6Q5VW22 663 aa15.31■□□□□ 0.04
COMMD4-215ENST00000566843 PSAPL1Q6NUJ1 521 aa15.31■□□□□ 0.04
COMMD4-215ENST00000566843 CCBE1Q6UXH8 406 aaPredicted RBP15.31■□□□□ 0.04
COMMD4-215ENST00000566843 VASH1Q7L8A9 365 aaPredicted RBP15.31■□□□□ 0.04
COMMD4-215ENST00000566843 GPR142Q7Z601 462 aa15.31■□□□□ 0.04
COMMD4-215ENST00000566843 KRTCAP2Q8N6L1 136 aa15.31■□□□□ 0.04
COMMD4-215ENST00000566843 AMER2Q8N7J2 671 aa15.31■□□□□ 0.04
COMMD4-215ENST00000566843 LPPQ93052 612 aa15.31■□□□□ 0.04
COMMD4-215ENST00000566843 AGAP4Q96P64 663 aa15.31■□□□□ 0.04
COMMD4-215ENST00000566843 NDEL1Q9GZM8 345 aa15.31■□□□□ 0.04
COMMD4-215ENST00000566843 IPPKQ9H8X2 491 aa15.31■□□□□ 0.04
COMMD4-215ENST00000566843 RNF6Q9Y252 685 aa15.31■□□□□ 0.04
COMMD4-215ENST00000566843 WDR47O94967 919 aa15.3■□□□□ 0.04
COMMD4-215ENST00000566843 CCNDBP1O95273 360 aa15.3■□□□□ 0.04
COMMD4-215ENST00000566843 GADD45AP24522 165 aa15.3■□□□□ 0.04
COMMD4-215ENST00000566843 GTF2E2P29084 291 aaKnown RBP15.3■□□□□ 0.04
COMMD4-215ENST00000566843 GNPDA1P46926 289 aa15.3■□□□□ 0.04
COMMD4-215ENST00000566843 LIMK1P53667 647 aa15.3■□□□□ 0.04
COMMD4-215ENST00000566843 COPZ1P61923 177 aa15.3■□□□□ 0.04
COMMD4-215ENST00000566843 LAPTM4AQ15012 233 aa15.3■□□□□ 0.04
COMMD4-215ENST00000566843 TBCEQ15813 527 aaPredicted RBP15.3■□□□□ 0.04
COMMD4-215ENST00000566843 PRSS36Q5K4E3 855 aa15.3■□□□□ 0.04
COMMD4-215ENST00000566843 SUSD1Q6UWL2 747 aa15.3■□□□□ 0.04
COMMD4-215ENST00000566843 GLT6D1Q7Z4J2 308 aa15.3■□□□□ 0.04
COMMD4-215ENST00000566843 TRIM46Q7Z4K8 759 aa15.3■□□□□ 0.04
COMMD4-215ENST00000566843 MON1AQ86VX9 555 aa15.3■□□□□ 0.04
COMMD4-215ENST00000566843 PGBD3Q8N328 593 aa15.3■□□□□ 0.04
COMMD4-215ENST00000566843 AGO1Q9UL18 857 aaKnown RBP15.3■□□□□ 0.04
COMMD4-215ENST00000566843 SCML2Q9UQR0 700 aa15.3■□□□□ 0.04
COMMD4-215ENST00000566843 PGLSO95336 258 aa15.29■□□□□ 0.04
COMMD4-215ENST00000566843 KRT75O95678 551 aa15.29■□□□□ 0.04
COMMD4-215ENST00000566843 EPHA2P29317 976 aa15.29■□□□□ 0.04
COMMD4-215ENST00000566843 PTPN6P29350 595 aa15.29■□□□□ 0.04
COMMD4-215ENST00000566843 TRPC1P48995 793 aa15.29■□□□□ 0.04
COMMD4-215ENST00000566843 CLCN7P51798 805 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms