RNA–Protein interactions for RNA: ENST00000566756.5

CMTM3-213, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-213ENST00000566756 LIMD1Q9UGP4 676 aa16.37■□□□□ 0.21
CMTM3-213ENST00000566756 ZMYM5Q9UJ78 669 aa16.37■□□□□ 0.21
CMTM3-213ENST00000566756 FNDC3AQ9Y2H6 1198 aaKnown RBP16.37■□□□□ 0.21
CMTM3-213ENST00000566756 SCN8AQ9UQD0 1980 aa16.37■□□□□ 0.21
CMTM3-213ENST00000566756 A0A1W2PRU2 124 aa16.37■□□□□ 0.21
CMTM3-213ENST00000566756 NPIPB8E9PQR5 432 aa16.37■□□□□ 0.21
CMTM3-213ENST00000566756 MANBAO00462 879 aa16.37■□□□□ 0.21
CMTM3-213ENST00000566756 CBFA2T3O75081 653 aa16.37■□□□□ 0.21
CMTM3-213ENST00000566756 RECQL5O94762 991 aaPredicted RBP16.37■□□□□ 0.21
CMTM3-213ENST00000566756 SLC25A14O95258 325 aaPredicted RBP16.37■□□□□ 0.21
CMTM3-213ENST00000566756 PRAMEF12O95522 483 aa16.37■□□□□ 0.21
CMTM3-213ENST00000566756 TRBC1P01850 177 aa16.37■□□□□ 0.21
CMTM3-213ENST00000566756 EPB42P16452 691 aa16.37■□□□□ 0.21
CMTM3-213ENST00000566756 PRPH2P23942 346 aa16.37■□□□□ 0.21
CMTM3-213ENST00000566756 MAP4P27816 1152 aaKnown RBP16.37■□□□□ 0.21
CMTM3-213ENST00000566756 YAP1P46937 504 aaKnown RBP16.37■□□□□ 0.21
CMTM3-213ENST00000566756 PTGR1Q14914 329 aa16.37■□□□□ 0.21
CMTM3-213ENST00000566756 PTPRRQ15256 657 aa16.37■□□□□ 0.21
CMTM3-213ENST00000566756 IMPG1Q17R60 797 aa16.37■□□□□ 0.21
CMTM3-213ENST00000566756 USP39Q53GS9 565 aaKnown RBP16.37■□□□□ 0.21
CMTM3-213ENST00000566756 C6orf141Q5SZD1 244 aa16.37■□□□□ 0.21
CMTM3-213ENST00000566756 GTF2IRD2BQ6EKJ0 949 aa16.37■□□□□ 0.21
CMTM3-213ENST00000566756 ENPP6Q6UWR7 440 aa16.37■□□□□ 0.21
CMTM3-213ENST00000566756 MSANTD1Q6ZTZ1 278 aa16.37■□□□□ 0.21
CMTM3-213ENST00000566756 GTF2IRD2Q86UP8 949 aa16.37■□□□□ 0.21
CMTM3-213ENST00000566756 EID3Q8N140 333 aa16.37■□□□□ 0.21
CMTM3-213ENST00000566756 ZCCHC7Q8N3Z6 543 aaKnown RBP16.37■□□□□ 0.21
CMTM3-213ENST00000566756 LIX1Q8N485 282 aa16.37■□□□□ 0.21
CMTM3-213ENST00000566756 ALG14Q96F25 216 aa16.37■□□□□ 0.21
CMTM3-213ENST00000566756 HBEGFQ99075 208 aa16.37■□□□□ 0.21
CMTM3-213ENST00000566756 KAT8Q9H7Z6 458 aaKnown RBP16.37■□□□□ 0.21
CMTM3-213ENST00000566756 FANCEQ9HB96 536 aa16.37■□□□□ 0.21
CMTM3-213ENST00000566756 SLC25A37Q9NYZ2 338 aa16.37■□□□□ 0.21
CMTM3-213ENST00000566756 VPS51Q9UID3 782 aa16.37■□□□□ 0.21
CMTM3-213ENST00000566756 PSME2Q9UL46 239 aa16.37■□□□□ 0.21
CMTM3-213ENST00000566756 ZNF490Q9ULM2 529 aaPredicted RBP16.37■□□□□ 0.21
CMTM3-213ENST00000566756 INVSQ9Y283 1065 aa16.37■□□□□ 0.21
CMTM3-213ENST00000566756 NAALAD2Q9Y3Q0 740 aa16.37■□□□□ 0.21
CMTM3-213ENST00000566756 NOTCH4Q99466 2003 aa16.36■□□□□ 0.21
CMTM3-213ENST00000566756 A0A096LPI6 279 aa16.36■□□□□ 0.21
CMTM3-213ENST00000566756 AGAP14A8MT82 685 aa16.36■□□□□ 0.21
CMTM3-213ENST00000566756 CCL16O15467 120 aa16.36■□□□□ 0.21
CMTM3-213ENST00000566756 KRT6AP02538 564 aa16.36■□□□□ 0.21
CMTM3-213ENST00000566756 KRT6BP04259 564 aa16.36■□□□□ 0.21
CMTM3-213ENST00000566756 HNRNPA1P09651 372 aaKnown RBP eCLIP16.36■□□□□ 0.21
CMTM3-213ENST00000566756 PRPS2P11908 318 aa16.36■□□□□ 0.21
CMTM3-213ENST00000566756 ACPPP15309 386 aa16.36■□□□□ 0.21
CMTM3-213ENST00000566756 PTPN2P17706 415 aa16.36■□□□□ 0.21
CMTM3-213ENST00000566756 MATN1P21941 496 aa16.36■□□□□ 0.21
CMTM3-213ENST00000566756 MZF1P28698 734 aaPredicted RBP16.36■□□□□ 0.21
CMTM3-213ENST00000566756 KRT6CP48668 564 aa16.36■□□□□ 0.21
CMTM3-213ENST00000566756 CLDN8P56748 225 aa16.36■□□□□ 0.21
CMTM3-213ENST00000566756 NKG7Q16617 165 aa16.36■□□□□ 0.21
CMTM3-213ENST00000566756 CDKN3Q16667 212 aa16.36■□□□□ 0.21
CMTM3-213ENST00000566756 GGTA1PQ4G0N0 100 aa16.36■□□□□ 0.21
CMTM3-213ENST00000566756 SPANXN4Q5MJ08 99 aa16.36■□□□□ 0.21
CMTM3-213ENST00000566756 MPP7Q5T2T1 576 aa16.36■□□□□ 0.21
CMTM3-213ENST00000566756 FAM151BQ6UXP7 276 aa16.36■□□□□ 0.21
CMTM3-213ENST00000566756 ZNF554Q86TJ5 538 aa16.36■□□□□ 0.21
CMTM3-213ENST00000566756 METTL3Q86U44 580 aaKnown RBP16.36■□□□□ 0.21
CMTM3-213ENST00000566756 SPARTQ8N0X7 666 aa16.36■□□□□ 0.21
CMTM3-213ENST00000566756 CHDHQ8NE62 594 aaPredicted RBP16.36■□□□□ 0.21
CMTM3-213ENST00000566756 FBXO30Q8TB52 745 aa16.36■□□□□ 0.21
CMTM3-213ENST00000566756 SNX19Q92543 992 aa16.36■□□□□ 0.21
CMTM3-213ENST00000566756 FAM162AQ96A26 154 aa16.36■□□□□ 0.21
CMTM3-213ENST00000566756 BCL7BQ9BQE9 202 aa16.36■□□□□ 0.21
CMTM3-213ENST00000566756 SLC46A2Q9BY10 475 aa16.36■□□□□ 0.21
CMTM3-213ENST00000566756 DNAAF2Q9NVR5 837 aaKnown RBP16.36■□□□□ 0.21
CMTM3-213ENST00000566756 KLQ9UEF7 1012 aa16.36■□□□□ 0.21
CMTM3-213ENST00000566756 PDE10AQ9Y233 779 aa16.36■□□□□ 0.21
CMTM3-213ENST00000566756 MYO7AQ13402 2215 aa16.35■□□□□ 0.21
CMTM3-213ENST00000566756 SLC16A6O15403 523 aa16.35■□□□□ 0.21
CMTM3-213ENST00000566756 GPR39O43194 453 aa16.35■□□□□ 0.21
CMTM3-213ENST00000566756 TBL1XO60907 577 aa16.35■□□□□ 0.21
CMTM3-213ENST00000566756 SEC22BO75396 215 aa16.35■□□□□ 0.21
CMTM3-213ENST00000566756 GUCA1CO95843 209 aa16.35■□□□□ 0.21
CMTM3-213ENST00000566756 PCNAP12004 261 aa16.35■□□□□ 0.21
CMTM3-213ENST00000566756 RYKP34925 604 aa16.35■□□□□ 0.21
CMTM3-213ENST00000566756 GGT5P36269 586 aa16.35■□□□□ 0.21
CMTM3-213ENST00000566756 PHKG1Q16816 387 aa16.35■□□□□ 0.21
CMTM3-213ENST00000566756 GRAMD4Q6IC98 578 aa16.35■□□□□ 0.21
CMTM3-213ENST00000566756 R3HCC1LQ7Z5L2 792 aaKnown RBP16.35■□□□□ 0.21
CMTM3-213ENST00000566756 HIPK1Q86Z02 1210 aa16.35■□□□□ 0.21
CMTM3-213ENST00000566756 RGL4Q8IZJ4 473 aa16.35■□□□□ 0.21
CMTM3-213ENST00000566756 FAM86B1Q8N7N1 296 aa16.35■□□□□ 0.21
CMTM3-213ENST00000566756 LKAAEAR1Q8TD35 194 aa16.35■□□□□ 0.21
CMTM3-213ENST00000566756 FBLIM1Q8WUP2 373 aa16.35■□□□□ 0.21
CMTM3-213ENST00000566756 ZNF566Q969W8 418 aa16.35■□□□□ 0.21
CMTM3-213ENST00000566756 OR52E6Q96RD3 313 aa16.35■□□□□ 0.21
CMTM3-213ENST00000566756 CPPED1Q9BRF8 314 aaPredicted RBP16.35■□□□□ 0.21
CMTM3-213ENST00000566756 NAA50Q9GZZ1 169 aaKnown RBP16.35■□□□□ 0.21
CMTM3-213ENST00000566756 PAIP1Q9H074 479 aaKnown RBP16.35■□□□□ 0.21
CMTM3-213ENST00000566756 RMND5AQ9H871 391 aa16.35■□□□□ 0.21
CMTM3-213ENST00000566756 IL26Q9NPH9 171 aa16.35■□□□□ 0.21
CMTM3-213ENST00000566756 SH3BP1Q9Y3L3 701 aa16.35■□□□□ 0.21
CMTM3-213ENST00000566756 PCDHGA8Q9Y5G5 932 aa16.35■□□□□ 0.21
CMTM3-213ENST00000566756 hCG_2014768A0A024R1R8 64 aa16.35■□□□□ 0.21
CMTM3-213ENST00000566756 GRM6O15303 877 aa16.35■□□□□ 0.21
CMTM3-213ENST00000566756 CREG1O75629 220 aa16.35■□□□□ 0.21
CMTM3-213ENST00000566756 STK16O75716 305 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms