RNA–Protein interactions for RNA: ENST00000566078.1

CTCF-203, Transcript of CCCTC-binding factor, humanhuman

TSL 2

Gene CTCF, Length 1,627 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-203ENST00000566078 PKNOX1P55347 436 aa29.68■■■□□ 2.34
CTCF-203ENST00000566078 PLK5Q496M5 336 aa29.68■■■□□ 2.34
CTCF-203ENST00000566078 FAM219BQ5XKK7 198 aa29.68■■■□□ 2.34
CTCF-203ENST00000566078 CLEC6AQ6EIG7 209 aa29.68■■■□□ 2.34
CTCF-203ENST00000566078 TAF8Q7Z7C8 310 aa29.68■■■□□ 2.34
CTCF-203ENST00000566078 KLHDC8AQ8IYD2 350 aa29.68■■■□□ 2.34
CTCF-203ENST00000566078 KIRREL3Q8IZU9 778 aa29.68■■■□□ 2.34
CTCF-203ENST00000566078 ANKS4BQ8N8V4 417 aa29.68■■■□□ 2.34
CTCF-203ENST00000566078 OR56A3Q8NH54 315 aa29.68■■■□□ 2.34
CTCF-203ENST00000566078 IL17FQ96PD4 163 aa29.68■■■□□ 2.34
CTCF-203ENST00000566078 MVB12BQ9H7P6 319 aa29.68■■■□□ 2.34
CTCF-203ENST00000566078 TAAR2Q9P1P5 351 aa29.68■■■□□ 2.34
CTCF-203ENST00000566078 SLC22A14Q9Y267 594 aa29.68■■■□□ 2.34
CTCF-203ENST00000566078 USP34Q70CQ2 3546 aa29.68■■■□□ 2.34
CTCF-203ENST00000566078 SLCO1B7G3V0H7 640 aa29.67■■■□□ 2.34
CTCF-203ENST00000566078 MATN2O00339 956 aa29.67■■■□□ 2.34
CTCF-203ENST00000566078 ZNF195O14628 629 aa29.67■■■□□ 2.34
CTCF-203ENST00000566078 ESRRBO95718 433 aa29.67■■■□□ 2.34
CTCF-203ENST00000566078 OTCP00480 354 aa29.67■■■□□ 2.34
CTCF-203ENST00000566078 F3P13726 295 aa29.67■■■□□ 2.34
CTCF-203ENST00000566078 C1orf61Q13536 156 aa29.67■■■□□ 2.34
CTCF-203ENST00000566078 PDCD2Q16342 344 aaPredicted RBP29.67■■■□□ 2.34
CTCF-203ENST00000566078 PRRT3Q5FWE3 981 aa29.67■■■□□ 2.34
CTCF-203ENST00000566078 DCBLD1Q8N8Z6 715 aa29.67■■■□□ 2.34
CTCF-203ENST00000566078 FAR2Q96K12 515 aa29.67■■■□□ 2.34
CTCF-203ENST00000566078 CDK15Q96Q40 435 aa29.67■■■□□ 2.34
CTCF-203ENST00000566078 KCNA7Q96RP8 456 aa29.67■■■□□ 2.34
CTCF-203ENST00000566078 VTI1BQ9UEU0 232 aa29.67■■■□□ 2.34
CTCF-203ENST00000566078 ZNF225Q9UK10 706 aa29.67■■■□□ 2.34
CTCF-203ENST00000566078 AZIN1O14977 448 aa29.67■■■□□ 2.34
CTCF-203ENST00000566078 HDAC3O15379 428 aa29.67■■■□□ 2.34
CTCF-203ENST00000566078 KATNA1O75449 491 aa29.67■■■□□ 2.34
CTCF-203ENST00000566078 CRCPO75575 148 aa29.67■■■□□ 2.34
CTCF-203ENST00000566078 AVPR2P30518 371 aa29.67■■■□□ 2.34
CTCF-203ENST00000566078 TBPL1P62380 186 aa29.67■■■□□ 2.34
CTCF-203ENST00000566078 TRAF3Q13114 568 aa29.67■■■□□ 2.34
CTCF-203ENST00000566078 TEAD4Q15561 434 aa29.67■■■□□ 2.34
CTCF-203ENST00000566078 THOC6Q86W42 341 aaKnown RBP29.67■■■□□ 2.34
CTCF-203ENST00000566078 CAMK1GQ96NX5 476 aa29.67■■■□□ 2.34
CTCF-203ENST00000566078 ABCF3Q9NUQ8 709 aa29.67■■■□□ 2.34
CTCF-203ENST00000566078 SPATA7Q9P0W8 599 aa29.67■■■□□ 2.34
CTCF-203ENST00000566078 POLG2Q9UHN1 485 aa29.67■■■□□ 2.34
CTCF-203ENST00000566078 OR4F21O95013 312 aa29.66■■■□□ 2.34
CTCF-203ENST00000566078 FOXA1P55317 472 aa29.66■■■□□ 2.34
CTCF-203ENST00000566078 ERVPABLB-1P60509 514 aa29.66■■■□□ 2.34
CTCF-203ENST00000566078 VWA5B1Q5TIE3 1220 aa29.66■■■□□ 2.34
CTCF-203ENST00000566078 KANK2Q63ZY3 851 aa29.66■■■□□ 2.34
CTCF-203ENST00000566078 CEP68Q76N32 757 aa29.66■■■□□ 2.34
CTCF-203ENST00000566078 CLYBLQ8N0X4 340 aa29.66■■■□□ 2.34
CTCF-203ENST00000566078 LMNTD1Q8N9Z9 388 aa29.66■■■□□ 2.34
CTCF-203ENST00000566078 NELL1Q92832 810 aa29.66■■■□□ 2.34
CTCF-203ENST00000566078 INTS7Q9NVH2 962 aaKnown RBP29.66■■■□□ 2.34
CTCF-203ENST00000566078 A0A1B0GTW7 788 aa29.65■■■□□ 2.34
CTCF-203ENST00000566078 SKAP2O75563 359 aaPredicted RBP29.65■■■□□ 2.34
CTCF-203ENST00000566078 FGF4P08620 206 aa29.65■■■□□ 2.34
CTCF-203ENST00000566078 EPORP19235 508 aa29.65■■■□□ 2.34
CTCF-203ENST00000566078 TSTA3Q13630 321 aaPredicted RBP29.65■■■□□ 2.34
CTCF-203ENST00000566078 FASTKQ14296 549 aaKnown RBP29.65■■■□□ 2.34
CTCF-203ENST00000566078 LETMD1Q6P1Q0 360 aa29.65■■■□□ 2.34
CTCF-203ENST00000566078 OR4F6Q8NGB9 312 aa29.65■■■□□ 2.34
CTCF-203ENST00000566078 MAPK15Q8TD08 544 aa29.65■■■□□ 2.34
CTCF-203ENST00000566078 EBF4Q9BQW3 602 aa29.65■■■□□ 2.34
CTCF-203ENST00000566078 NUF2Q9BZD4 464 aa29.65■■■□□ 2.34
CTCF-203ENST00000566078 LNPEPQ9UIQ6 1025 aa29.65■■■□□ 2.34
CTCF-203ENST00000566078 COLEC10Q9Y6Z7 277 aa29.65■■■□□ 2.34
CTCF-203ENST00000566078 CACNA1EQ15878 2313 aa29.65■■■□□ 2.34
CTCF-203ENST00000566078 PRAMEF33A0A0G2JMD5 474 aa29.64■■■□□ 2.34
CTCF-203ENST00000566078 JUNP05412 331 aaKnown RBP29.64■■■□□ 2.34
CTCF-203ENST00000566078 ERGP11308 486 aa29.64■■■□□ 2.34
CTCF-203ENST00000566078 GNSP15586 552 aa29.64■■■□□ 2.34
CTCF-203ENST00000566078 CDC16Q13042 620 aa29.64■■■□□ 2.34
CTCF-203ENST00000566078 CAPN13Q6MZZ7 669 aaPredicted RBP29.64■■■□□ 2.34
CTCF-203ENST00000566078 LRRC56Q8IYG6 542 aaPredicted RBP29.64■■■□□ 2.34
CTCF-203ENST00000566078 RAB42Q8N4Z0 105 aa29.64■■■□□ 2.34
CTCF-203ENST00000566078 CXorf40BQ96DE9 158 aa29.64■■■□□ 2.34
CTCF-203ENST00000566078 PPP1R36Q96LQ0 422 aa29.64■■■□□ 2.34
CTCF-203ENST00000566078 NRTNQ99748 197 aa29.64■■■□□ 2.34
CTCF-203ENST00000566078 MENTQ9BUN1 341 aa29.64■■■□□ 2.34
CTCF-203ENST00000566078 ZSCAN32Q9NX65 697 aa29.64■■■□□ 2.34
CTCF-203ENST00000566078 ZNF624Q9P2J8 865 aaPredicted RBP29.64■■■□□ 2.34
CTCF-203ENST00000566078 ADAMTS9Q9P2N4 1935 aa29.64■■■□□ 2.34
CTCF-203ENST00000566078 TRBV23OR9-2A0A075B6M9 112 aa29.63■■■□□ 2.33
CTCF-203ENST00000566078 A0A1B0GVT2 93 aa29.63■■■□□ 2.33
CTCF-203ENST00000566078 PRR5-ARHGAP8B1AHC4 643 aa29.63■■■□□ 2.33
CTCF-203ENST00000566078 E7ENX8 843 aa29.63■■■□□ 2.33
CTCF-203ENST00000566078 DIAPH2O60879 1101 aa29.63■■■□□ 2.33
CTCF-203ENST00000566078 HSD17B2P37059 387 aa29.63■■■□□ 2.33
CTCF-203ENST00000566078 TAP2Q03519 686 aa29.63■■■□□ 2.33
CTCF-203ENST00000566078 ARHGAP19Q14CB8 494 aa29.63■■■□□ 2.33
CTCF-203ENST00000566078 ZNF528Q3MIS6 628 aa29.63■■■□□ 2.33
CTCF-203ENST00000566078 MILR1Q7Z6M3 343 aa29.63■■■□□ 2.33
CTCF-203ENST00000566078 NTMT1Q9BV86 223 aa29.63■■■□□ 2.33
CTCF-203ENST00000566078 CCDC177Q9NQR7 707 aaPredicted RBP29.63■■■□□ 2.33
CTCF-203ENST00000566078 SP9P0CG40 484 aa29.63■■■□□ 2.33
CTCF-203ENST00000566078 NDUFS1P28331 727 aa29.63■■■□□ 2.33
CTCF-203ENST00000566078 SERPINB3P29508 390 aa29.63■■■□□ 2.33
CTCF-203ENST00000566078 CNR2P34972 360 aa29.63■■■□□ 2.33
CTCF-203ENST00000566078 IDH3AP50213 366 aa29.63■■■□□ 2.33
CTCF-203ENST00000566078 ELOCQ15369 112 aa29.63■■■□□ 2.33
CTCF-203ENST00000566078 ANGPT1Q15389 498 aa29.63■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms