RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 TLK1Q9UKI8 766 aa12.27□□□□□ -0.45
SF3B3-206ENST00000565990 IKZF3Q9UKT9 509 aa12.27□□□□□ -0.45
SF3B3-206ENST00000565990 ASF1AQ9Y294 204 aa12.27□□□□□ -0.45
SF3B3-206ENST00000565990 CFAP20Q9Y6A4 193 aaKnown RBP12.27□□□□□ -0.45
SF3B3-206ENST00000565990 UNC13CQ8NB66 2214 aa12.27□□□□□ -0.45
SF3B3-206ENST00000565990 B4GAT1O43505 415 aa12.26□□□□□ -0.45
SF3B3-206ENST00000565990 ZBTB14O43829 449 aa12.26□□□□□ -0.45
SF3B3-206ENST00000565990 RPN2P04844 631 aa12.26□□□□□ -0.45
SF3B3-206ENST00000565990 LTA4HP09960 611 aaKnown RBP12.26□□□□□ -0.45
SF3B3-206ENST00000565990 CEACAM1P13688 526 aa12.26□□□□□ -0.45
SF3B3-206ENST00000565990 CREB1P16220 341 aa12.26□□□□□ -0.45
SF3B3-206ENST00000565990 SDHBP21912 280 aa12.26□□□□□ -0.45
SF3B3-206ENST00000565990 KCNC1P48547 511 aa12.26□□□□□ -0.45
SF3B3-206ENST00000565990 SLC18A2Q05940 514 aa12.26□□□□□ -0.45
SF3B3-206ENST00000565990 ILKQ13418 452 aa12.26□□□□□ -0.45
SF3B3-206ENST00000565990 GPR18Q14330 331 aa12.26□□□□□ -0.45
SF3B3-206ENST00000565990 TRIP6Q15654 476 aaKnown RBP12.26□□□□□ -0.45
SF3B3-206ENST00000565990 WASHC2DQ5SRD0 308 aa12.26□□□□□ -0.45
SF3B3-206ENST00000565990 CGB2Q6NT52 195 aa12.26□□□□□ -0.45
SF3B3-206ENST00000565990 SBSNQ6UWP8 590 aa12.26□□□□□ -0.45
SF3B3-206ENST00000565990 RAPH1Q70E73 1250 aa12.26□□□□□ -0.45
SF3B3-206ENST00000565990 PIWIL4Q7Z3Z4 852 aaKnown RBP12.26□□□□□ -0.45
SF3B3-206ENST00000565990 ALYREFQ86V81 257 aaKnown RBP12.26□□□□□ -0.45
SF3B3-206ENST00000565990 LCA5Q86VQ0 697 aa12.26□□□□□ -0.45
SF3B3-206ENST00000565990 CENPLQ8N0S6 344 aaPredicted RBP12.26□□□□□ -0.45
SF3B3-206ENST00000565990 MYO1HQ8N1T3 1032 aa12.26□□□□□ -0.45
SF3B3-206ENST00000565990 FITM2Q8N6M3 262 aa12.26□□□□□ -0.45
SF3B3-206ENST00000565990 OR5AR1Q8NGP9 310 aa12.26□□□□□ -0.45
SF3B3-206ENST00000565990 C10orf82Q8WW14 230 aa12.26□□□□□ -0.45
SF3B3-206ENST00000565990 NAT6Q93015 286 aa12.26□□□□□ -0.45
SF3B3-206ENST00000565990 KIAA1191Q96A73 305 aa12.26□□□□□ -0.45
SF3B3-206ENST00000565990 RAD51AP1Q96B01 352 aa12.26□□□□□ -0.45
SF3B3-206ENST00000565990 LRRC37BQ96QE4 947 aa12.26□□□□□ -0.45
SF3B3-206ENST00000565990 PARVBQ9HBI1 364 aa12.26□□□□□ -0.45
SF3B3-206ENST00000565990 NMRAL1Q9HBL8 299 aa12.26□□□□□ -0.45
SF3B3-206ENST00000565990 IMP3Q9NV31 184 aaKnown RBP12.26□□□□□ -0.45
SF3B3-206ENST00000565990 EVA1BQ9NVM1 165 aa12.26□□□□□ -0.45
SF3B3-206ENST00000565990 TOR4AQ9NXH8 423 aa12.26□□□□□ -0.45
SF3B3-206ENST00000565990 FTSJ1Q9UET6 329 aa12.26□□□□□ -0.45
SF3B3-206ENST00000565990 TBK1Q9UHD2 729 aa12.26□□□□□ -0.45
SF3B3-206ENST00000565990 ADAMTS6Q9UKP5 1117 aa12.26□□□□□ -0.45
SF3B3-206ENST00000565990 CFAP54Q96N23 3096 aa12.25□□□□□ -0.45
SF3B3-206ENST00000565990 RHPN2P1A8MT19 583 aa12.25□□□□□ -0.45
SF3B3-206ENST00000565990 ARHGEF33A8MVX0 844 aa12.25□□□□□ -0.45
SF3B3-206ENST00000565990 CDC7O00311 574 aa12.25□□□□□ -0.45
SF3B3-206ENST00000565990 MT-ND3P03897 115 aa12.25□□□□□ -0.45
SF3B3-206ENST00000565990 CATP04040 527 aaKnown RBP12.25□□□□□ -0.45
SF3B3-206ENST00000565990 ENO2P09104 434 aaPredicted RBP12.25□□□□□ -0.45
SF3B3-206ENST00000565990 DHRS4L1P0CG22 281 aa12.25□□□□□ -0.45
SF3B3-206ENST00000565990 ACADVLP49748 655 aa12.25□□□□□ -0.45
SF3B3-206ENST00000565990 EPHA4P54764 986 aa12.25□□□□□ -0.45
SF3B3-206ENST00000565990 SP140Q13342 867 aa12.25□□□□□ -0.45
SF3B3-206ENST00000565990 ACAP2Q15057 778 aa12.25□□□□□ -0.45
SF3B3-206ENST00000565990 CCSMST1Q4G0I0 132 aa12.25□□□□□ -0.45
SF3B3-206ENST00000565990 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.25□□□□□ -0.45
SF3B3-206ENST00000565990 PERM1Q5SV97 790 aa12.25□□□□□ -0.45
SF3B3-206ENST00000565990 DUS1LQ6P1R4 473 aaKnown RBP12.25□□□□□ -0.45
SF3B3-206ENST00000565990 GUSBP11Q6P575 273 aa12.25□□□□□ -0.45
SF3B3-206ENST00000565990 TBC1D1Q86TI0 1168 aaPredicted RBP12.25□□□□□ -0.45
SF3B3-206ENST00000565990 TRIM48Q8IWZ4 208 aa12.25□□□□□ -0.45
SF3B3-206ENST00000565990 PLD6Q8N2A8 252 aaKnown RBP12.25□□□□□ -0.45
SF3B3-206ENST00000565990 TMEM151AQ8N4L1 468 aa12.25□□□□□ -0.45
SF3B3-206ENST00000565990 RHEBL1Q8TAI7 183 aa12.25□□□□□ -0.45
SF3B3-206ENST00000565990 NXNL1Q96CM4 212 aa12.25□□□□□ -0.45
SF3B3-206ENST00000565990 RSRC1Q96IZ7 334 aaKnown RBP12.25□□□□□ -0.45
SF3B3-206ENST00000565990 SLC38A3Q99624 504 aa12.25□□□□□ -0.45
SF3B3-206ENST00000565990 RTKNQ9BST9 563 aa12.25□□□□□ -0.45
SF3B3-206ENST00000565990 RAB33BQ9H082 229 aa12.25□□□□□ -0.45
SF3B3-206ENST00000565990 SLC32A1Q9H598 525 aa12.25□□□□□ -0.45
SF3B3-206ENST00000565990 STN1Q9H668 368 aaKnown RBP12.25□□□□□ -0.45
SF3B3-206ENST00000565990 RDH14Q9HBH5 336 aa12.25□□□□□ -0.45
SF3B3-206ENST00000565990 DCDC2Q9UHG0 476 aa12.25□□□□□ -0.45
SF3B3-206ENST00000565990 BAIAP2L1Q9UHR4 511 aa12.25□□□□□ -0.45
SF3B3-206ENST00000565990 RUVBL2Q9Y230 463 aaKnown RBP12.25□□□□□ -0.45
SF3B3-206ENST00000565990 PDE10AQ9Y233 779 aa12.25□□□□□ -0.45
SF3B3-206ENST00000565990 PCDHGA1Q9Y5H4 931 aa12.25□□□□□ -0.45
SF3B3-206ENST00000565990 CPED1A4D0V7 1026 aa12.24□□□□□ -0.45
SF3B3-206ENST00000565990 LILRA5A6NI73 299 aa12.24□□□□□ -0.45
SF3B3-206ENST00000565990 FOXO6A8MYZ6 492 aa12.24□□□□□ -0.45
SF3B3-206ENST00000565990 ZW10O43264 779 aa12.24□□□□□ -0.45
SF3B3-206ENST00000565990 ERGP11308 486 aa12.24□□□□□ -0.45
SF3B3-206ENST00000565990 CDK4P11802 303 aa12.24□□□□□ -0.45
SF3B3-206ENST00000565990 CD1CP29017 333 aa12.24□□□□□ -0.45
SF3B3-206ENST00000565990 GMPRP36959 345 aa12.24□□□□□ -0.45
SF3B3-206ENST00000565990 HSD17B2P37059 387 aa12.24□□□□□ -0.45
SF3B3-206ENST00000565990 DAB2P98082 770 aa12.24□□□□□ -0.45
SF3B3-206ENST00000565990 CDKL1Q00532 357 aa12.24□□□□□ -0.45
SF3B3-206ENST00000565990 IRF9Q00978 393 aa12.24□□□□□ -0.45
SF3B3-206ENST00000565990 PRKG2Q13237 762 aa12.24□□□□□ -0.45
SF3B3-206ENST00000565990 CSHL1Q14406 222 aa12.24□□□□□ -0.45
SF3B3-206ENST00000565990 KRT33BQ14525 404 aa12.24□□□□□ -0.45
SF3B3-206ENST00000565990 ARHGAP19Q14CB8 494 aa12.24□□□□□ -0.45
SF3B3-206ENST00000565990 CLPPQ16740 277 aaPredicted RBP12.24□□□□□ -0.45
SF3B3-206ENST00000565990 PHKG1Q16816 387 aa12.24□□□□□ -0.45
SF3B3-206ENST00000565990 PPP1R3AQ16821 1122 aa12.24□□□□□ -0.45
SF3B3-206ENST00000565990 RSPO4Q2I0M5 234 aaPredicted RBP12.24□□□□□ -0.45
SF3B3-206ENST00000565990 FAM83EQ2M2I3 478 aa12.24□□□□□ -0.45
SF3B3-206ENST00000565990 TAF1BQ53T94 588 aaPredicted RBP12.24□□□□□ -0.45
SF3B3-206ENST00000565990 CDKL4Q5MAI5 379 aa12.24□□□□□ -0.45
SF3B3-206ENST00000565990 TTC23LQ6PF05 361 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms