RNA–Protein interactions for RNA: ENST00000563404.1

HDGFL3-203, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-203ENST00000563404 CALR3Q96L12 384 aaKnown RBP16.15■□□□□ 0.18
HDGFL3-203ENST00000563404 ILKAPQ9H0C8 392 aaPredicted RBP16.15■□□□□ 0.18
HDGFL3-203ENST00000563404 CIDEBQ9UHD4 219 aa16.15■□□□□ 0.18
HDGFL3-203ENST00000563404 PCDHGA10Q9Y5H3 936 aa16.15■□□□□ 0.18
HDGFL3-203ENST00000563404 ANKRD12Q6UB98 2062 aa16.14■□□□□ 0.17
HDGFL3-203ENST00000563404 AGPSO00116 658 aa16.14■□□□□ 0.17
HDGFL3-203ENST00000563404 ZNF189O75820 626 aaPredicted RBP16.14■□□□□ 0.17
HDGFL3-203ENST00000563404 GOT2P00505 430 aaKnown RBP16.14■□□□□ 0.17
HDGFL3-203ENST00000563404 IGHEP01854 428 aa16.14■□□□□ 0.17
HDGFL3-203ENST00000563404 ALPPP05187 535 aa16.14■□□□□ 0.17
HDGFL3-203ENST00000563404 CD63P08962 238 aa16.14■□□□□ 0.17
HDGFL3-203ENST00000563404 OR56A5P0C7T3 313 aa16.14■□□□□ 0.17
HDGFL3-203ENST00000563404 CETN2P41208 172 aa16.14■□□□□ 0.17
HDGFL3-203ENST00000563404 GRIA1P42261 906 aa16.14■□□□□ 0.17
HDGFL3-203ENST00000563404 SEMA3AQ14563 771 aa16.14■□□□□ 0.17
HDGFL3-203ENST00000563404 P3H1Q32P28 736 aa16.14■□□□□ 0.17
HDGFL3-203ENST00000563404 ZNF534Q76KX8 674 aa16.14■□□□□ 0.17
HDGFL3-203ENST00000563404 COX15Q7KZN9 410 aa16.14■□□□□ 0.17
HDGFL3-203ENST00000563404 MCATQ8IVS2 390 aaKnown RBP16.14■□□□□ 0.17
HDGFL3-203ENST00000563404 SLC22A15Q8IZD6 547 aa16.14■□□□□ 0.17
HDGFL3-203ENST00000563404 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.14■□□□□ 0.17
HDGFL3-203ENST00000563404 HDAC10Q969S8 669 aa16.14■□□□□ 0.17
HDGFL3-203ENST00000563404 ZNF778Q96MU6 729 aa16.14■□□□□ 0.17
HDGFL3-203ENST00000563404 IL17FQ96PD4 163 aa16.14■□□□□ 0.17
HDGFL3-203ENST00000563404 ALS2CR12Q96Q35 445 aa16.14■□□□□ 0.17
HDGFL3-203ENST00000563404 PANX2Q96RD6 677 aa16.14■□□□□ 0.17
HDGFL3-203ENST00000563404 NDC1Q9BTX1 674 aa16.14■□□□□ 0.17
HDGFL3-203ENST00000563404 ATP13A2Q9NQ11 1180 aa16.14■□□□□ 0.17
HDGFL3-203ENST00000563404 IRAK4Q9NWZ3 460 aa16.14■□□□□ 0.17
HDGFL3-203ENST00000563404 PCM1Q15154 2024 aa16.14■□□□□ 0.17
HDGFL3-203ENST00000563404 A0A0U1RQJ8 604 aa16.13■□□□□ 0.17
HDGFL3-203ENST00000563404 ANKUB1A6NFN9 424 aa16.13■□□□□ 0.17
HDGFL3-203ENST00000563404 IQCF5A8MTL0 148 aa16.13■□□□□ 0.17
HDGFL3-203ENST00000563404 SOCS6O14544 535 aa16.13■□□□□ 0.17
HDGFL3-203ENST00000563404 PSMD3O43242 534 aa16.13■□□□□ 0.17
HDGFL3-203ENST00000563404 ALAS2P22557 587 aa16.13■□□□□ 0.17
HDGFL3-203ENST00000563404 MCM3P25205 808 aa16.13■□□□□ 0.17
HDGFL3-203ENST00000563404 DCTP40126 519 aa16.13■□□□□ 0.17
HDGFL3-203ENST00000563404 GLRBP48167 497 aa16.13■□□□□ 0.17
HDGFL3-203ENST00000563404 RAB28P51157 221 aa16.13■□□□□ 0.17
HDGFL3-203ENST00000563404 PLOD1Q02809 727 aaPredicted RBP16.13■□□□□ 0.17
HDGFL3-203ENST00000563404 CYP2A13Q16696 494 aa16.13■□□□□ 0.17
HDGFL3-203ENST00000563404 DNAJC21Q5F1R6 531 aaKnown RBP16.13■□□□□ 0.17
HDGFL3-203ENST00000563404 FCRL6Q6DN72 434 aa16.13■□□□□ 0.17
HDGFL3-203ENST00000563404 TTLL10Q6ZVT0 673 aa16.13■□□□□ 0.17
HDGFL3-203ENST00000563404 ZADH2Q8N4Q0 377 aa16.13■□□□□ 0.17
HDGFL3-203ENST00000563404 DTWD1Q8N5C7 304 aa16.13■□□□□ 0.17
HDGFL3-203ENST00000563404 TTC13Q8NBP0 860 aa16.13■□□□□ 0.17
HDGFL3-203ENST00000563404 SLC6A20Q9NP91 592 aa16.13■□□□□ 0.17
HDGFL3-203ENST00000563404 FBXL4Q9UKA2 621 aa16.13■□□□□ 0.17
HDGFL3-203ENST00000563404 SLC5A6Q9Y289 635 aa16.13■□□□□ 0.17
HDGFL3-203ENST00000563404 COPG1Q9Y678 874 aaKnown RBP16.13■□□□□ 0.17
HDGFL3-203ENST00000563404 CACNA1DQ01668 2161 aa16.13■□□□□ 0.17
HDGFL3-203ENST00000563404 CSMD1Q96PZ7 3565 aa16.12■□□□□ 0.17
HDGFL3-203ENST00000563404 GOLGA6L9A6NEM1 432 aa16.12■□□□□ 0.17
HDGFL3-203ENST00000563404 GPC4O75487 556 aa16.12■□□□□ 0.17
HDGFL3-203ENST00000563404 IPO13O94829 963 aaKnown RBP16.12■□□□□ 0.17
HDGFL3-203ENST00000563404 ONECUT2O95948 504 aa16.12■□□□□ 0.17
HDGFL3-203ENST00000563404 MMP11P24347 488 aa16.12■□□□□ 0.17
HDGFL3-203ENST00000563404 GRIA3P42263 894 aa16.12■□□□□ 0.17
HDGFL3-203ENST00000563404 HSPA14Q0VDF9 509 aa16.12■□□□□ 0.17
HDGFL3-203ENST00000563404 AIMP2Q13155 320 aaKnown RBP16.12■□□□□ 0.17
HDGFL3-203ENST00000563404 NKG7Q16617 165 aa16.12■□□□□ 0.17
HDGFL3-203ENST00000563404 HIF1AQ16665 826 aa16.12■□□□□ 0.17
HDGFL3-203ENST00000563404 TSTD2Q5T7W7 516 aa16.12■□□□□ 0.17
HDGFL3-203ENST00000563404 OVCH1Q7RTY7 1134 aa16.12■□□□□ 0.17
HDGFL3-203ENST00000563404 TAX1BP1Q86VP1 789 aa16.12■□□□□ 0.17
HDGFL3-203ENST00000563404 ATG4AQ8WYN0 398 aa16.12■□□□□ 0.17
HDGFL3-203ENST00000563404 SPSB2Q99619 263 aa16.12■□□□□ 0.17
HDGFL3-203ENST00000563404 MESP1Q9BRJ9 268 aa16.12■□□□□ 0.17
HDGFL3-203ENST00000563404 ETNK1Q9HBU6 452 aa16.12■□□□□ 0.17
HDGFL3-203ENST00000563404 AMFRQ9UKV5 643 aa16.12■□□□□ 0.17
HDGFL3-203ENST00000563404 NUP210LQ5VU65 1888 aa16.12■□□□□ 0.17
HDGFL3-203ENST00000563404 A0A1B0GX78 115 aa16.11■□□□□ 0.17
HDGFL3-203ENST00000563404 FTCDO95954 541 aa16.11■□□□□ 0.17
HDGFL3-203ENST00000563404 CD9P21926 228 aa16.11■□□□□ 0.17
HDGFL3-203ENST00000563404 ITGA3P26006 1051 aa16.11■□□□□ 0.17
HDGFL3-203ENST00000563404 ACVR1Q04771 509 aa16.11■□□□□ 0.17
HDGFL3-203ENST00000563404 CDH17Q12864 832 aa16.11■□□□□ 0.17
HDGFL3-203ENST00000563404 PRAMEF13Q5VWM6 474 aa16.11■□□□□ 0.17
HDGFL3-203ENST00000563404 AFTPHQ6ULP2 937 aa16.11■□□□□ 0.17
HDGFL3-203ENST00000563404 KIRREL2Q6UWL6 708 aa16.11■□□□□ 0.17
HDGFL3-203ENST00000563404 IGFL2Q6UWQ7 119 aa16.11■□□□□ 0.17
HDGFL3-203ENST00000563404 SHISA6Q6ZSJ9 500 aa16.11■□□□□ 0.17
HDGFL3-203ENST00000563404 PEX26Q7Z412 305 aa16.11■□□□□ 0.17
HDGFL3-203ENST00000563404 PRUNE1Q86TP1 453 aa16.11■□□□□ 0.17
HDGFL3-203ENST00000563404 LINC00523Q86TU6 105 aa16.11■□□□□ 0.17
HDGFL3-203ENST00000563404 LDB1Q86U70 411 aaPredicted RBP16.11■□□□□ 0.17
HDGFL3-203ENST00000563404 KRT222Q8N1A0 295 aa16.11■□□□□ 0.17
HDGFL3-203ENST00000563404 DNAAF3Q8N9W5 541 aa16.11■□□□□ 0.17
HDGFL3-203ENST00000563404 OR4L1Q8NH43 312 aa16.11■□□□□ 0.17
HDGFL3-203ENST00000563404 CFAP61Q8NHU2 1237 aa16.11■□□□□ 0.17
HDGFL3-203ENST00000563404 UBE2Q2Q8WVN8 375 aa16.11■□□□□ 0.17
HDGFL3-203ENST00000563404 TM9SF4Q92544 642 aa16.11■□□□□ 0.17
HDGFL3-203ENST00000563404 DLG3Q92796 817 aa16.11■□□□□ 0.17
HDGFL3-203ENST00000563404 FKBP10Q96AY3 582 aa16.11■□□□□ 0.17
HDGFL3-203ENST00000563404 C5orf34Q96MH7 638 aa16.11■□□□□ 0.17
HDGFL3-203ENST00000563404 ZNF285Q96NJ3 590 aa16.11■□□□□ 0.17
HDGFL3-203ENST00000563404 CDC23Q9UJX2 597 aa16.11■□□□□ 0.17
HDGFL3-203ENST00000563404 RIMKLBQ9ULI2 386 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms