RNA–Protein interactions for RNA: ENST00000562626.1

CLK3-208, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-208ENST00000562626 SLC16A8O95907 504 aa9.47□□□□□ -0.89
CLK3-208ENST00000562626 NUDT17P0C025 328 aa9.47□□□□□ -0.89
CLK3-208ENST00000562626 UGT2B7P16662 529 aa9.47□□□□□ -0.89
CLK3-208ENST00000562626 IMPA1P29218 277 aa9.47□□□□□ -0.89
CLK3-208ENST00000562626 ETV5P41161 510 aa9.47□□□□□ -0.89
CLK3-208ENST00000562626 PPM1FP49593 454 aaPredicted RBP9.47□□□□□ -0.89
CLK3-208ENST00000562626 SERPINB8P50452 374 aa9.47□□□□□ -0.89
CLK3-208ENST00000562626 RAB28P51157 221 aa9.47□□□□□ -0.89
CLK3-208ENST00000562626 FBXO48Q5FWF7 155 aa9.47□□□□□ -0.89
CLK3-208ENST00000562626 TMEM71Q6P5X7 295 aa9.47□□□□□ -0.89
CLK3-208ENST00000562626 WDR74Q6RFH5 385 aaPredicted RBP9.47□□□□□ -0.89
CLK3-208ENST00000562626 SUSD1Q6UWL2 747 aa9.47□□□□□ -0.89
CLK3-208ENST00000562626 ARHGAP22Q7Z5H3 698 aa9.47□□□□□ -0.89
CLK3-208ENST00000562626 MYO1HQ8N1T3 1032 aa9.47□□□□□ -0.89
CLK3-208ENST00000562626 FBXO15Q8NCQ5 510 aaPredicted RBP9.47□□□□□ -0.89
CLK3-208ENST00000562626 OR4D9Q8NGE8 314 aa9.47□□□□□ -0.89
CLK3-208ENST00000562626 OR9A1PQ8NGU1 263 aa9.47□□□□□ -0.89
CLK3-208ENST00000562626 OR2L8Q8NGY9 312 aa9.47□□□□□ -0.89
CLK3-208ENST00000562626 RAD51AP1Q96B01 352 aa9.47□□□□□ -0.89
CLK3-208ENST00000562626 TSPAN17Q96FV3 270 aa9.47□□□□□ -0.89
CLK3-208ENST00000562626 PRR11Q96HE9 360 aaPredicted RBP9.47□□□□□ -0.89
CLK3-208ENST00000562626 AHCYL2Q96HN2 611 aaKnown RBP9.47□□□□□ -0.89
CLK3-208ENST00000562626 OR2A14Q96R47 310 aa9.47□□□□□ -0.89
CLK3-208ENST00000562626 MAP3K3Q99759 626 aa9.47□□□□□ -0.89
CLK3-208ENST00000562626 SLC12A9Q9BXP2 914 aa9.47□□□□□ -0.89
CLK3-208ENST00000562626 DERL2Q9GZP9 239 aa9.47□□□□□ -0.89
CLK3-208ENST00000562626 SRMSQ9H3Y6 488 aa9.47□□□□□ -0.89
CLK3-208ENST00000562626 SYNPO2LQ9H987 977 aa9.47□□□□□ -0.89
CLK3-208ENST00000562626 UTP6Q9NYH9 597 aaKnown RBP9.47□□□□□ -0.89
CLK3-208ENST00000562626 ACTR10Q9NZ32 417 aa9.47□□□□□ -0.89
CLK3-208ENST00000562626 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.47□□□□□ -0.89
CLK3-208ENST00000562626 STOX2Q9P2F5 926 aaPredicted RBP9.47□□□□□ -0.89
CLK3-208ENST00000562626 POLG2Q9UHN1 485 aa9.47□□□□□ -0.89
CLK3-208ENST00000562626 POMT2Q9UKY4 750 aa9.47□□□□□ -0.89
CLK3-208ENST00000562626 SEC16AO15027 2179 aa9.46□□□□□ -0.89
CLK3-208ENST00000562626 GSAPA4D1B5 854 aa9.46□□□□□ -0.9
CLK3-208ENST00000562626 E7ENX8 843 aa9.46□□□□□ -0.9
CLK3-208ENST00000562626 GOLGA8RI6L899 631 aa9.46□□□□□ -0.9
CLK3-208ENST00000562626 GUCA1CO95843 209 aa9.46□□□□□ -0.9
CLK3-208ENST00000562626 SYF2O95926 243 aaKnown RBP9.46□□□□□ -0.9
CLK3-208ENST00000562626 CATP04040 527 aaKnown RBP9.46□□□□□ -0.9
CLK3-208ENST00000562626 C8GP07360 202 aa9.46□□□□□ -0.9
CLK3-208ENST00000562626 CTSBP07858 339 aa9.46□□□□□ -0.9
CLK3-208ENST00000562626 CCL4P13236 92 aa9.46□□□□□ -0.9
CLK3-208ENST00000562626 ST6GAL1P15907 406 aa9.46□□□□□ -0.9
CLK3-208ENST00000562626 ITIH1P19827 911 aa9.46□□□□□ -0.9
CLK3-208ENST00000562626 TYK2P29597 1187 aa9.46□□□□□ -0.9
CLK3-208ENST00000562626 PRDX3P30048 256 aaKnown RBP9.46□□□□□ -0.9
CLK3-208ENST00000562626 CCKBRP32239 447 aa9.46□□□□□ -0.9
CLK3-208ENST00000562626 SHMT2P34897 504 aa9.46□□□□□ -0.9
CLK3-208ENST00000562626 GLRBP48167 497 aa9.46□□□□□ -0.9
CLK3-208ENST00000562626 RGS4P49798 205 aa9.46□□□□□ -0.9
CLK3-208ENST00000562626 SEPHS1P49903 392 aa9.46□□□□□ -0.9
CLK3-208ENST00000562626 SERPINB9P50453 376 aa9.46□□□□□ -0.9
CLK3-208ENST00000562626 SLC12A2P55011 1212 aa9.46□□□□□ -0.9
CLK3-208ENST00000562626 INHBCP55103 352 aa9.46□□□□□ -0.9
CLK3-208ENST00000562626 SH3BP2P78314 561 aa9.46□□□□□ -0.9
CLK3-208ENST00000562626 TAP2Q03519 686 aa9.46□□□□□ -0.9
CLK3-208ENST00000562626 KCNAB1Q14722 419 aa9.46□□□□□ -0.9
CLK3-208ENST00000562626 ZIC1Q15915 447 aa9.46□□□□□ -0.9
CLK3-208ENST00000562626 CYP2A13Q16696 494 aa9.46□□□□□ -0.9
CLK3-208ENST00000562626 BEND6Q5SZJ8 279 aaPredicted RBP9.46□□□□□ -0.9
CLK3-208ENST00000562626 PHF19Q5T6S3 580 aa9.46□□□□□ -0.9
CLK3-208ENST00000562626 SH2D5Q6ZV89 423 aa9.46□□□□□ -0.9
CLK3-208ENST00000562626 RAPH1Q70E73 1250 aa9.46□□□□□ -0.9
CLK3-208ENST00000562626 CLEC14AQ86T13 490 aa9.46□□□□□ -0.9
CLK3-208ENST00000562626 ISCA2Q86U28 154 aa9.46□□□□□ -0.9
CLK3-208ENST00000562626 OOSP2Q86WS3 158 aa9.46□□□□□ -0.9
CLK3-208ENST00000562626 TMPRSS12Q86WS5 348 aa9.46□□□□□ -0.9
CLK3-208ENST00000562626 NKAPQ8N5F7 415 aaKnown RBP9.46□□□□□ -0.9
CLK3-208ENST00000562626 MYRIPQ8NFW9 859 aa9.46□□□□□ -0.9
CLK3-208ENST00000562626 FOPNLQ96NB1 174 aa9.46□□□□□ -0.9
CLK3-208ENST00000562626 DEPDC7Q96QD5 511 aa9.46□□□□□ -0.9
CLK3-208ENST00000562626 ATOH8Q96SQ7 321 aa9.46□□□□□ -0.9
CLK3-208ENST00000562626 RAB33BQ9H082 229 aa9.46□□□□□ -0.9
CLK3-208ENST00000562626 ZMYND15Q9H091 742 aa9.46□□□□□ -0.9
CLK3-208ENST00000562626 ATG10Q9H0Y0 220 aa9.46□□□□□ -0.9
CLK3-208ENST00000562626 VPS11Q9H270 941 aa9.46□□□□□ -0.9
CLK3-208ENST00000562626 PARVBQ9HBI1 364 aa9.46□□□□□ -0.9
CLK3-208ENST00000562626 SYTL2Q9HCH5 934 aa9.46□□□□□ -0.9
CLK3-208ENST00000562626 PCMTD2Q9NV79 361 aa9.46□□□□□ -0.9
CLK3-208ENST00000562626 OCIAD1Q9NX40 245 aa9.46□□□□□ -0.9
CLK3-208ENST00000562626 PSMC3IPQ9P2W1 217 aaPredicted RBP9.46□□□□□ -0.9
CLK3-208ENST00000562626 EPHA6Q9UF33 1036 aa9.46□□□□□ -0.9
CLK3-208ENST00000562626 FETUBQ9UGM5 382 aa9.46□□□□□ -0.9
CLK3-208ENST00000562626 PLAAQ9Y263 795 aa9.46□□□□□ -0.9
CLK3-208ENST00000562626 ACOT9Q9Y305 439 aa9.46□□□□□ -0.9
CLK3-208ENST00000562626 ASB1Q9Y576 335 aa9.46□□□□□ -0.9
CLK3-208ENST00000562626 NUP210LQ5VU65 1888 aa9.45□□□□□ -0.9
CLK3-208ENST00000562626 CEP295Q9C0D2 2601 aa9.45□□□□□ -0.9
CLK3-208ENST00000562626 FAM221BA6H8Z2 402 aa9.45□□□□□ -0.9
CLK3-208ENST00000562626 SLC9B1P1A6NJY1 282 aa9.45□□□□□ -0.9
CLK3-208ENST00000562626 SLC16A5O15375 505 aa9.45□□□□□ -0.9
CLK3-208ENST00000562626 TAPBPO15533 448 aa9.45□□□□□ -0.9
CLK3-208ENST00000562626 KRT38O76015 456 aa9.45□□□□□ -0.9
CLK3-208ENST00000562626 RPN2P04844 631 aa9.45□□□□□ -0.9
CLK3-208ENST00000562626 SNRPAP09012 282 aaKnown RBP9.45□□□□□ -0.9
CLK3-208ENST00000562626 SBK3P0C264 359 aa9.45□□□□□ -0.9
CLK3-208ENST00000562626 CDK4P11802 303 aa9.45□□□□□ -0.9
CLK3-208ENST00000562626 MTHFD2P13995 350 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 107.4 ms