RNA–Protein interactions for RNA: ENST00000562310.1

COMMD4-205, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-205ENST00000562310 PSMD13Q9UNM6 376 aa13.88□□□□□ -0.19
COMMD4-205ENST00000562310 ST14Q9Y5Y6 855 aa13.88□□□□□ -0.19
COMMD4-205ENST00000562310 SPTY2D1-AS1A0A0U1RR47 76 aa13.87□□□□□ -0.19
COMMD4-205ENST00000562310 CLGNO14967 610 aa13.87□□□□□ -0.19
COMMD4-205ENST00000562310 PIP5K1BO14986 540 aa13.87□□□□□ -0.19
COMMD4-205ENST00000562310 JUNP05412 331 aaKnown RBP13.87□□□□□ -0.19
COMMD4-205ENST00000562310 AOC1P19801 751 aa13.87□□□□□ -0.19
COMMD4-205ENST00000562310 ITPKAP23677 461 aa13.87□□□□□ -0.19
COMMD4-205ENST00000562310 NDUFS1P28331 727 aa13.87□□□□□ -0.19
COMMD4-205ENST00000562310 PRDX3P30048 256 aaKnown RBP13.87□□□□□ -0.19
COMMD4-205ENST00000562310 ADSLP30566 484 aaPredicted RBP13.87□□□□□ -0.19
COMMD4-205ENST00000562310 BLKP51451 505 aa13.87□□□□□ -0.19
COMMD4-205ENST00000562310 PNLIPRP1P54315 467 aa13.87□□□□□ -0.19
COMMD4-205ENST00000562310 FOXA1P55317 472 aa13.87□□□□□ -0.19
COMMD4-205ENST00000562310 ILF3Q12906 894 aaKnown RBP eCLIP13.87□□□□□ -0.19
COMMD4-205ENST00000562310 BNIP1Q12981 228 aa13.87□□□□□ -0.19
COMMD4-205ENST00000562310 NAE1Q13564 534 aa13.87□□□□□ -0.19
COMMD4-205ENST00000562310 LSM12Q3MHD2 195 aaKnown RBP13.87□□□□□ -0.19
COMMD4-205ENST00000562310 NXNQ6DKJ4 435 aa13.87□□□□□ -0.19
COMMD4-205ENST00000562310 ABRAXAS1Q6UWZ7 409 aa13.87□□□□□ -0.19
COMMD4-205ENST00000562310 C11orf74Q86VG3 221 aa13.87□□□□□ -0.19
COMMD4-205ENST00000562310 PARGQ86W56 976 aa13.87□□□□□ -0.19
COMMD4-205ENST00000562310 HID1Q8IV36 788 aa13.87□□□□□ -0.19
COMMD4-205ENST00000562310 DDIASQ8IXT1 998 aa13.87□□□□□ -0.19
COMMD4-205ENST00000562310 FRMD1Q8N878 549 aa13.87□□□□□ -0.19
COMMD4-205ENST00000562310 CDYL2Q8N8U2 506 aa13.87□□□□□ -0.19
COMMD4-205ENST00000562310 L3MBTL4Q8NA19 623 aa13.87□□□□□ -0.19
COMMD4-205ENST00000562310 OR5AR1Q8NGP9 310 aa13.87□□□□□ -0.19
COMMD4-205ENST00000562310 MED8Q96G25 268 aa13.87□□□□□ -0.19
COMMD4-205ENST00000562310 SLC6A18Q96N87 628 aa13.87□□□□□ -0.19
COMMD4-205ENST00000562310 KCNA7Q96RP8 456 aa13.87□□□□□ -0.19
COMMD4-205ENST00000562310 MIPEPQ99797 713 aa13.87□□□□□ -0.19
COMMD4-205ENST00000562310 SGPP1Q9BX95 441 aa13.87□□□□□ -0.19
COMMD4-205ENST00000562310 GSDMCQ9BYG8 508 aa13.87□□□□□ -0.19
COMMD4-205ENST00000562310 ATG10Q9H0Y0 220 aa13.87□□□□□ -0.19
COMMD4-205ENST00000562310 WDR55Q9H6Y2 383 aaPredicted RBP13.87□□□□□ -0.19
COMMD4-205ENST00000562310 CCDC177Q9NQR7 707 aaPredicted RBP13.87□□□□□ -0.19
COMMD4-205ENST00000562310 PRMT8Q9NR22 394 aaPredicted RBP13.87□□□□□ -0.19
COMMD4-205ENST00000562310 SPATA6Q9NWH7 488 aaPredicted RBP13.87□□□□□ -0.19
COMMD4-205ENST00000562310 PCOLCE2Q9UKZ9 415 aa13.87□□□□□ -0.19
COMMD4-205ENST00000562310 SLC12A4Q9UP95 1085 aa13.87□□□□□ -0.19
COMMD4-205ENST00000562310 SLC22A14Q9Y267 594 aa13.87□□□□□ -0.19
COMMD4-205ENST00000562310 FANCMQ8IYD8 2048 aa13.86□□□□□ -0.19
COMMD4-205ENST00000562310 PRUNE2Q8WUY3 3088 aa13.86□□□□□ -0.19
COMMD4-205ENST00000562310 A0A1B0GTL3 188 aa13.86□□□□□ -0.19
COMMD4-205ENST00000562310 E9PBE3 544 aa13.86□□□□□ -0.19
COMMD4-205ENST00000562310 MAP3K13O43283 966 aa13.86□□□□□ -0.19
COMMD4-205ENST00000562310 DCXO43602 365 aa13.86□□□□□ -0.19
COMMD4-205ENST00000562310 PI15O43692 258 aa13.86□□□□□ -0.19
COMMD4-205ENST00000562310 KLHL41O60662 606 aa13.86□□□□□ -0.19
COMMD4-205ENST00000562310 KRT6AP02538 564 aa13.86□□□□□ -0.19
COMMD4-205ENST00000562310 KRT6BP04259 564 aa13.86□□□□□ -0.19
COMMD4-205ENST00000562310 CAPN1P07384 714 aa13.86□□□□□ -0.19
COMMD4-205ENST00000562310 MTHFD1P11586 935 aaKnown RBP13.86□□□□□ -0.19
COMMD4-205ENST00000562310 EPORP19235 508 aa13.86□□□□□ -0.19
COMMD4-205ENST00000562310 RPL10P27635 214 aaKnown RBP13.86□□□□□ -0.19
COMMD4-205ENST00000562310 KRT6CP48668 564 aa13.86□□□□□ -0.19
COMMD4-205ENST00000562310 HNRNPH2P55795 449 aaKnown RBP13.86□□□□□ -0.19
COMMD4-205ENST00000562310 TBPL1P62380 186 aa13.86□□□□□ -0.19
COMMD4-205ENST00000562310 RACK1P63244 317 aaKnown RBP13.86□□□□□ -0.19
COMMD4-205ENST00000562310 ZNF33BQ06732 778 aa13.86□□□□□ -0.19
COMMD4-205ENST00000562310 CYP2A13Q16696 494 aa13.86□□□□□ -0.19
COMMD4-205ENST00000562310 ZXDCQ2QGD7 858 aaPredicted RBP13.86□□□□□ -0.19
COMMD4-205ENST00000562310 XKR7Q5GH72 579 aa13.86□□□□□ -0.19
COMMD4-205ENST00000562310 LIPJQ5W064 366 aa13.86□□□□□ -0.19
COMMD4-205ENST00000562310 SLC22A18ASQ8N1D0 253 aa13.86□□□□□ -0.19
COMMD4-205ENST00000562310 SETD7Q8WTS6 366 aaKnown RBP13.86□□□□□ -0.19
COMMD4-205ENST00000562310 TSACCQ96A04 125 aaPredicted RBP13.86□□□□□ -0.19
COMMD4-205ENST00000562310 PYCR2Q96C36 320 aa13.86□□□□□ -0.19
COMMD4-205ENST00000562310 PPP1R36Q96LQ0 422 aa13.86□□□□□ -0.19
COMMD4-205ENST00000562310 INSM2Q96T92 566 aaPredicted RBP13.86□□□□□ -0.19
COMMD4-205ENST00000562310 HAUS8Q9BT25 410 aa13.86□□□□□ -0.19
COMMD4-205ENST00000562310 PCBD2Q9H0N5 130 aa13.86□□□□□ -0.19
COMMD4-205ENST00000562310 IMP3Q9NV31 184 aaKnown RBP13.86□□□□□ -0.19
COMMD4-205ENST00000562310 SNX6Q9UNH7 406 aa13.86□□□□□ -0.19
COMMD4-205ENST00000562310 TDRKHQ9Y2W6 561 aaKnown RBP13.86□□□□□ -0.19
COMMD4-205ENST00000562310 DYRK1BQ9Y463 629 aa13.86□□□□□ -0.19
COMMD4-205ENST00000562310 PLEKHM1Q9Y4G2 1056 aa13.86□□□□□ -0.19
COMMD4-205ENST00000562310 KCNE2Q9Y6J6 123 aa13.86□□□□□ -0.19
COMMD4-205ENST00000562310 CAPN7Q9Y6W3 813 aa13.86□□□□□ -0.19
COMMD4-205ENST00000562310 COLEC10Q9Y6Z7 277 aa13.86□□□□□ -0.19
COMMD4-205ENST00000562310 KRT87PA6NCN2 255 aa13.85□□□□□ -0.19
COMMD4-205ENST00000562310 E7ENX8 843 aa13.85□□□□□ -0.19
COMMD4-205ENST00000562310 SLC2A4P14672 509 aa13.85□□□□□ -0.19
COMMD4-205ENST00000562310 GNAZP19086 355 aa13.85□□□□□ -0.19
COMMD4-205ENST00000562310 NCF2P19878 526 aaPredicted RBP13.85□□□□□ -0.19
COMMD4-205ENST00000562310 CD38P28907 300 aa13.85□□□□□ -0.19
COMMD4-205ENST00000562310 HNF4AP41235 474 aa13.85□□□□□ -0.19
COMMD4-205ENST00000562310 ACTR1BP42025 376 aa13.85□□□□□ -0.19
COMMD4-205ENST00000562310 ATP4BP51164 291 aa13.85□□□□□ -0.19
COMMD4-205ENST00000562310 ACTR1AP61163 376 aa13.85□□□□□ -0.19
COMMD4-205ENST00000562310 IRF8Q02556 426 aa13.85□□□□□ -0.19
COMMD4-205ENST00000562310 TAP2Q03519 686 aa13.85□□□□□ -0.19
COMMD4-205ENST00000562310 FZD2Q14332 565 aa13.85□□□□□ -0.19
COMMD4-205ENST00000562310 GRB7Q14451 532 aa13.85□□□□□ -0.19
COMMD4-205ENST00000562310 KRT33BQ14525 404 aa13.85□□□□□ -0.19
COMMD4-205ENST00000562310 RPE65Q16518 533 aa13.85□□□□□ -0.19
COMMD4-205ENST00000562310 WDR45BQ5MNZ6 344 aa13.85□□□□□ -0.19
COMMD4-205ENST00000562310 C10orf62Q5T681 223 aaPredicted RBP13.85□□□□□ -0.19
COMMD4-205ENST00000562310 OGFOD2Q6N063 350 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms