RNA–Protein interactions for RNA: ENST00000561381.5

USP3-220, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 2

Gene USP3, Length 979 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-220ENST00000561381 VWA5B1Q5TIE3 1220 aa11.2□□□□□ -0.62
USP3-220ENST00000561381 AFTPHQ6ULP2 937 aa11.2□□□□□ -0.62
USP3-220ENST00000561381 PPP1R21Q6ZMI0 780 aa11.2□□□□□ -0.62
USP3-220ENST00000561381 TAX1BP1Q86VP1 789 aa11.2□□□□□ -0.62
USP3-220ENST00000561381 SYCE1Q8N0S2 351 aa11.2□□□□□ -0.62
USP3-220ENST00000561381 LINC01555Q8NAE3 123 aa11.2□□□□□ -0.62
USP3-220ENST00000561381 PNPLA2Q96AD5 504 aa11.2□□□□□ -0.62
USP3-220ENST00000561381 IL17FQ96PD4 163 aa11.2□□□□□ -0.62
USP3-220ENST00000561381 MENTQ9BUN1 341 aa11.2□□□□□ -0.62
USP3-220ENST00000561381 CHRNA10Q9GZZ6 450 aa11.2□□□□□ -0.62
USP3-220ENST00000561381 SLC22A11Q9NSA0 550 aa11.2□□□□□ -0.62
USP3-220ENST00000561381 IRAK4Q9NWZ3 460 aa11.2□□□□□ -0.62
USP3-220ENST00000561381 P4HTMQ9NXG6 502 aa11.2□□□□□ -0.62
USP3-220ENST00000561381 MAP10Q9P2G4 905 aa11.2□□□□□ -0.62
USP3-220ENST00000561381 GPN3Q9UHW5 284 aaPredicted RBP11.2□□□□□ -0.62
USP3-220ENST00000561381 G3BP2Q9UN86 482 aaKnown RBP11.2□□□□□ -0.62
USP3-220ENST00000561381 HEATR9A2RTY3 570 aa11.19□□□□□ -0.62
USP3-220ENST00000561381 SUN1O94901 812 aa11.19□□□□□ -0.62
USP3-220ENST00000561381 UMODP07911 640 aa11.19□□□□□ -0.62
USP3-220ENST00000561381 ITGAXP20702 1163 aa11.19□□□□□ -0.62
USP3-220ENST00000561381 MAGP20916 626 aa11.19□□□□□ -0.62
USP3-220ENST00000561381 FOLR3P41439 243 aa11.19□□□□□ -0.62
USP3-220ENST00000561381 GRIA3P42263 894 aa11.19□□□□□ -0.62
USP3-220ENST00000561381 PLOD1Q02809 727 aaPredicted RBP11.19□□□□□ -0.62
USP3-220ENST00000561381 ACVR1Q04771 509 aa11.19□□□□□ -0.62
USP3-220ENST00000561381 KIF5AQ12840 1032 aa11.19□□□□□ -0.62
USP3-220ENST00000561381 SNX1Q13596 522 aa11.19□□□□□ -0.62
USP3-220ENST00000561381 GRB7Q14451 532 aa11.19□□□□□ -0.62
USP3-220ENST00000561381 KIR2DS3Q14952 304 aa11.19□□□□□ -0.62
USP3-220ENST00000561381 KCTD19Q17RG1 926 aaPredicted RBP11.19□□□□□ -0.62
USP3-220ENST00000561381 C4orf17Q53FE4 359 aa11.19□□□□□ -0.62
USP3-220ENST00000561381 DCAF10Q5QP82 559 aa11.19□□□□□ -0.62
USP3-220ENST00000561381 LYPLAL1Q5VWZ2 237 aa11.19□□□□□ -0.62
USP3-220ENST00000561381 MRPL14Q6P1L8 145 aaKnown RBP11.19□□□□□ -0.62
USP3-220ENST00000561381 TLDC1Q6P9B6 456 aa11.19□□□□□ -0.62
USP3-220ENST00000561381 PPP1R32Q7Z5V6 425 aa11.19□□□□□ -0.62
USP3-220ENST00000561381 SLC22A15Q8IZD6 547 aa11.19□□□□□ -0.62
USP3-220ENST00000561381 KRT222Q8N1A0 295 aa11.19□□□□□ -0.62
USP3-220ENST00000561381 OR2Y1Q8NGV0 311 aa11.19□□□□□ -0.62
USP3-220ENST00000561381 OR6P1Q8NGX9 317 aa11.19□□□□□ -0.62
USP3-220ENST00000561381 OR4L1Q8NH43 312 aa11.19□□□□□ -0.62
USP3-220ENST00000561381 CFAP61Q8NHU2 1237 aa11.19□□□□□ -0.62
USP3-220ENST00000561381 PROKR1Q8TCW9 393 aa11.19□□□□□ -0.62
USP3-220ENST00000561381 C1orf54Q8WWF1 131 aa11.19□□□□□ -0.62
USP3-220ENST00000561381 AP1M1Q9BXS5 423 aa11.19□□□□□ -0.62
USP3-220ENST00000561381 CASS4Q9NQ75 786 aa11.19□□□□□ -0.62
USP3-220ENST00000561381 TXLNGQ9NUQ3 528 aa11.19□□□□□ -0.62
USP3-220ENST00000561381 EURLQ9NYK6 297 aa11.19□□□□□ -0.62
USP3-220ENST00000561381 MARCH4Q9P2E8 410 aaPredicted RBP11.19□□□□□ -0.62
USP3-220ENST00000561381 PLEKHB1Q9UF11 243 aaPredicted RBP11.19□□□□□ -0.62
USP3-220ENST00000561381 NDOR1Q9UHB4 597 aa11.19□□□□□ -0.62
USP3-220ENST00000561381 PLCL2Q9UPR0 1127 aa11.19□□□□□ -0.62
USP3-220ENST00000561381 HIVEP3Q5T1R4 2406 aa11.18□□□□□ -0.62
USP3-220ENST00000561381 MDC1Q14676 2089 aaKnown RBP11.18□□□□□ -0.62
USP3-220ENST00000561381 KRT87PA6NCN2 255 aa11.18□□□□□ -0.62
USP3-220ENST00000561381 ERI2A8K979 691 aaKnown RBP11.18□□□□□ -0.62
USP3-220ENST00000561381 E7EVH7 732 aa11.18□□□□□ -0.62
USP3-220ENST00000561381 ALOX12BO75342 701 aa11.18□□□□□ -0.62
USP3-220ENST00000561381 GPC4O75487 556 aa11.18□□□□□ -0.62
USP3-220ENST00000561381 GAS8O95995 478 aa11.18□□□□□ -0.62
USP3-220ENST00000561381 ZSCAN5DPP0CG00 497 aa11.18□□□□□ -0.62
USP3-220ENST00000561381 ALAS2P22557 587 aa11.18□□□□□ -0.62
USP3-220ENST00000561381 ADRA1DP25100 572 aa11.18□□□□□ -0.62
USP3-220ENST00000561381 MCM3P25205 808 aa11.18□□□□□ -0.62
USP3-220ENST00000561381 STIP1P31948 543 aaKnown RBP11.18□□□□□ -0.62
USP3-220ENST00000561381 FDFT1P37268 417 aa11.18□□□□□ -0.62
USP3-220ENST00000561381 GCGRP47871 477 aa11.18□□□□□ -0.62
USP3-220ENST00000561381 RAB28P51157 221 aa11.18□□□□□ -0.62
USP3-220ENST00000561381 LAPTM4AQ15012 233 aa11.18□□□□□ -0.62
USP3-220ENST00000561381 DNAJC21Q5F1R6 531 aaKnown RBP11.18□□□□□ -0.62
USP3-220ENST00000561381 GAS2L3Q86XJ1 694 aa11.18□□□□□ -0.62
USP3-220ENST00000561381 HPS6Q86YV9 775 aa11.18□□□□□ -0.62
USP3-220ENST00000561381 MCATQ8IVS2 390 aaKnown RBP11.18□□□□□ -0.62
USP3-220ENST00000561381 GALNT16Q8N428 558 aa11.18□□□□□ -0.62
USP3-220ENST00000561381 DTWD1Q8N5C7 304 aa11.18□□□□□ -0.62
USP3-220ENST00000561381 CISD2Q8N5K1 135 aaKnown RBP11.18□□□□□ -0.62
USP3-220ENST00000561381 PRR7Q8TB68 274 aa11.18□□□□□ -0.62
USP3-220ENST00000561381 SSC4DQ8WTU2 575 aa11.18□□□□□ -0.62
USP3-220ENST00000561381 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.18□□□□□ -0.62
USP3-220ENST00000561381 SNRNP40Q96DI7 357 aaKnown RBP11.18□□□□□ -0.62
USP3-220ENST00000561381 FER1L6-AS2Q96M78 137 aa11.18□□□□□ -0.62
USP3-220ENST00000561381 RANBP9Q96S59 729 aa11.18□□□□□ -0.62
USP3-220ENST00000561381 C17orf62Q9BQA9 187 aa11.18□□□□□ -0.62
USP3-220ENST00000561381 NDC1Q9BTX1 674 aa11.18□□□□□ -0.62
USP3-220ENST00000561381 ZNF552Q9H707 407 aaPredicted RBP11.18□□□□□ -0.62
USP3-220ENST00000561381 ZBTB20Q9HC78 741 aaPredicted RBP11.18□□□□□ -0.62
USP3-220ENST00000561381 CHRAC1Q9NRG0 131 aa11.18□□□□□ -0.62
USP3-220ENST00000561381 RAB6BQ9NRW1 208 aa11.18□□□□□ -0.62
USP3-220ENST00000561381 SRPK3Q9UPE1 567 aa11.18□□□□□ -0.62
USP3-220ENST00000561381 ZNF148Q9UQR1 794 aa11.18□□□□□ -0.62
USP3-220ENST00000561381 TCAF1Q9Y4C2 921 aa11.18□□□□□ -0.62
USP3-220ENST00000561381 A1L4Q6 167 aa11.17□□□□□ -0.62
USP3-220ENST00000561381 PEX12O00623 359 aa11.17□□□□□ -0.62
USP3-220ENST00000561381 APRTP07741 180 aa11.17□□□□□ -0.62
USP3-220ENST00000561381 CD9P21926 228 aa11.17□□□□□ -0.62
USP3-220ENST00000561381 AOAHP28039 575 aa11.17□□□□□ -0.62
USP3-220ENST00000561381 PRAMEP78395 509 aa11.17□□□□□ -0.62
USP3-220ENST00000561381 CRADDP78560 199 aa11.17□□□□□ -0.62
USP3-220ENST00000561381 MYBPC3Q14896 1274 aa11.17□□□□□ -0.62
USP3-220ENST00000561381 NR6A1Q15406 480 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms