RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 PLCL2Q9UPR0 1127 aa12.6□□□□□ -0.39
TPM1-220ENST00000559556 SLC5A6Q9Y289 635 aa12.6□□□□□ -0.39
TPM1-220ENST00000559556 NTNG1Q9Y2I2 539 aa12.6□□□□□ -0.39
TPM1-220ENST00000559556 TDRKHQ9Y2W6 561 aaKnown RBP12.6□□□□□ -0.39
TPM1-220ENST00000559556 PCDHGA10Q9Y5H3 936 aa12.6□□□□□ -0.39
TPM1-220ENST00000559556 DNAJC13O75165 2243 aa12.6□□□□□ -0.39
TPM1-220ENST00000559556 CCDC78A2IDD5 438 aa12.59□□□□□ -0.39
TPM1-220ENST00000559556 OR51F1A6NGY5 319 aa12.59□□□□□ -0.39
TPM1-220ENST00000559556 ONECUT2O95948 504 aa12.59□□□□□ -0.39
TPM1-220ENST00000559556 OR56A5P0C7T3 313 aa12.59□□□□□ -0.39
TPM1-220ENST00000559556 ITGAXP20702 1163 aa12.59□□□□□ -0.39
TPM1-220ENST00000559556 MAGP20916 626 aa12.59□□□□□ -0.39
TPM1-220ENST00000559556 DCTP40126 519 aa12.59□□□□□ -0.39
TPM1-220ENST00000559556 RAB28P51157 221 aa12.59□□□□□ -0.39
TPM1-220ENST00000559556 GDF10P55107 478 aa12.59□□□□□ -0.39
TPM1-220ENST00000559556 AIMP2Q13155 320 aaKnown RBP12.59□□□□□ -0.39
TPM1-220ENST00000559556 KLF1Q13351 362 aaPredicted RBP12.59□□□□□ -0.39
TPM1-220ENST00000559556 SKOR2Q2VWA4 1001 aaPredicted RBP12.59□□□□□ -0.39
TPM1-220ENST00000559556 ZNF787Q6DD87 383 aa12.59□□□□□ -0.39
TPM1-220ENST00000559556 CUZD1Q86UP6 607 aa12.59□□□□□ -0.39
TPM1-220ENST00000559556 SLC22A15Q8IZD6 547 aa12.59□□□□□ -0.39
TPM1-220ENST00000559556 ZADH2Q8N4Q0 377 aa12.59□□□□□ -0.39
TPM1-220ENST00000559556 FAM71DQ8N9W8 422 aa12.59□□□□□ -0.39
TPM1-220ENST00000559556 TTC13Q8NBP0 860 aa12.59□□□□□ -0.39
TPM1-220ENST00000559556 RNF214Q8ND24 703 aa12.59□□□□□ -0.39
TPM1-220ENST00000559556 OR13J1Q8NGT2 312 aa12.59□□□□□ -0.39
TPM1-220ENST00000559556 C5orf34Q96MH7 638 aa12.59□□□□□ -0.39
TPM1-220ENST00000559556 WDR54Q9H977 334 aa12.59□□□□□ -0.39
TPM1-220ENST00000559556 ZBTB20Q9HC78 741 aaPredicted RBP12.59□□□□□ -0.39
TPM1-220ENST00000559556 ATP13A2Q9NQ11 1180 aa12.59□□□□□ -0.39
TPM1-220ENST00000559556 SLC22A11Q9NSA0 550 aa12.59□□□□□ -0.39
TPM1-220ENST00000559556 PIH1D1Q9NWS0 290 aaKnown RBP12.59□□□□□ -0.39
TPM1-220ENST00000559556 EURLQ9NYK6 297 aa12.59□□□□□ -0.39
TPM1-220ENST00000559556 COPG1Q9Y678 874 aaKnown RBP12.59□□□□□ -0.39
TPM1-220ENST00000559556 EPN1Q9Y6I3 576 aaPredicted RBP12.59□□□□□ -0.39
TPM1-220ENST00000559556 DUSP10Q9Y6W6 482 aa12.59□□□□□ -0.39
TPM1-220ENST00000559556 EML6Q6ZMW3 1958 aa12.58□□□□□ -0.4
TPM1-220ENST00000559556 SETD2Q9BYW2 2564 aaPredicted RBP12.58□□□□□ -0.4
TPM1-220ENST00000559556 A0A1B0GX78 115 aa12.58□□□□□ -0.4
TPM1-220ENST00000559556 CCDC162PA2VCL2 907 aa12.58□□□□□ -0.4
TPM1-220ENST00000559556 GRID2IPA4D2P6 1211 aa12.58□□□□□ -0.4
TPM1-220ENST00000559556 GOLGA6L9A6NEM1 432 aa12.58□□□□□ -0.4
TPM1-220ENST00000559556 ISM1B1AKI9 464 aa12.58□□□□□ -0.4
TPM1-220ENST00000559556 MASP2O00187 686 aa12.58□□□□□ -0.4
TPM1-220ENST00000559556 PSMD3O43242 534 aa12.58□□□□□ -0.4
TPM1-220ENST00000559556 MMP11P24347 488 aa12.58□□□□□ -0.4
TPM1-220ENST00000559556 COL8A1P27658 744 aa12.58□□□□□ -0.4
TPM1-220ENST00000559556 ARSFP54793 590 aa12.58□□□□□ -0.4
TPM1-220ENST00000559556 CCDC38Q502W7 563 aa12.58□□□□□ -0.4
TPM1-220ENST00000559556 DNAJC21Q5F1R6 531 aaKnown RBP12.58□□□□□ -0.4
TPM1-220ENST00000559556 IGFL2Q6UWQ7 119 aa12.58□□□□□ -0.4
TPM1-220ENST00000559556 NAPRTQ6XQN6 538 aa12.58□□□□□ -0.4
TPM1-220ENST00000559556 LINC00523Q86TU6 105 aa12.58□□□□□ -0.4
TPM1-220ENST00000559556 LINC01555Q8NAE3 123 aa12.58□□□□□ -0.4
TPM1-220ENST00000559556 PPP4R1Q8TF05 950 aa12.58□□□□□ -0.4
TPM1-220ENST00000559556 ALS2CR12Q96Q35 445 aa12.58□□□□□ -0.4
TPM1-220ENST00000559556 PANX2Q96RD6 677 aa12.58□□□□□ -0.4
TPM1-220ENST00000559556 WDR77Q9BQA1 342 aaPredicted RBP12.58□□□□□ -0.4
TPM1-220ENST00000559556 SLC26A1Q9H2B4 701 aa12.58□□□□□ -0.4
TPM1-220ENST00000559556 SLC6A20Q9NP91 592 aa12.58□□□□□ -0.4
TPM1-220ENST00000559556 ENAMQ9NRM1 1142 aa12.58□□□□□ -0.4
TPM1-220ENST00000559556 IRAK4Q9NWZ3 460 aa12.58□□□□□ -0.4
TPM1-220ENST00000559556 FBXL4Q9UKA2 621 aa12.58□□□□□ -0.4
TPM1-220ENST00000559556 RIMKLBQ9ULI2 386 aa12.58□□□□□ -0.4
TPM1-220ENST00000559556 SOWAHDA6NJG2 315 aa12.57□□□□□ -0.4
TPM1-220ENST00000559556 ERI2A8K979 691 aaKnown RBP12.57□□□□□ -0.4
TPM1-220ENST00000559556 F8W8V4 182 aa12.57□□□□□ -0.4
TPM1-220ENST00000559556 SOCS6O14544 535 aa12.57□□□□□ -0.4
TPM1-220ENST00000559556 DSCR3O14972 297 aa12.57□□□□□ -0.4
TPM1-220ENST00000559556 OR1I1O60431 355 aa12.57□□□□□ -0.4
TPM1-220ENST00000559556 ALBP02768 609 aa12.57□□□□□ -0.4
TPM1-220ENST00000559556 RPN2P04844 631 aa12.57□□□□□ -0.4
TPM1-220ENST00000559556 ATXN8OSP0DMR3 200 aa12.57□□□□□ -0.4
TPM1-220ENST00000559556 ACVR1Q04771 509 aa12.57□□□□□ -0.4
TPM1-220ENST00000559556 CDH17Q12864 832 aa12.57□□□□□ -0.4
TPM1-220ENST00000559556 ELOAQ14241 798 aaKnown RBP12.57□□□□□ -0.4
TPM1-220ENST00000559556 GRB7Q14451 532 aa12.57□□□□□ -0.4
TPM1-220ENST00000559556 YOD1Q5VVQ6 348 aaPredicted RBP12.57□□□□□ -0.4
TPM1-220ENST00000559556 PRAMEF13Q5VWM6 474 aa12.57□□□□□ -0.4
TPM1-220ENST00000559556 AFTPHQ6ULP2 937 aa12.57□□□□□ -0.4
TPM1-220ENST00000559556 TTLL10Q6ZVT0 673 aa12.57□□□□□ -0.4
TPM1-220ENST00000559556 COX15Q7KZN9 410 aa12.57□□□□□ -0.4
TPM1-220ENST00000559556 OVCH1Q7RTY7 1134 aa12.57□□□□□ -0.4
TPM1-220ENST00000559556 VRK3Q8IV63 474 aa12.57□□□□□ -0.4
TPM1-220ENST00000559556 DCUN1D3Q8IWE4 304 aa12.57□□□□□ -0.4
TPM1-220ENST00000559556 FAM20CQ8IXL6 584 aa12.57□□□□□ -0.4
TPM1-220ENST00000559556 ST6GALNAC3Q8NDV1 305 aa12.57□□□□□ -0.4
TPM1-220ENST00000559556 SLC35B2Q8TB61 432 aa12.57□□□□□ -0.4
TPM1-220ENST00000559556 DENND1AQ8TEH3 1009 aa12.57□□□□□ -0.4
TPM1-220ENST00000559556 COG1Q8WTW3 980 aa12.57□□□□□ -0.4
TPM1-220ENST00000559556 SLC22A18Q96BI1 424 aa12.57□□□□□ -0.4
TPM1-220ENST00000559556 ZNF285Q96NJ3 590 aa12.57□□□□□ -0.4
TPM1-220ENST00000559556 SPSB2Q99619 263 aa12.57□□□□□ -0.4
TPM1-220ENST00000559556 TMEM121Q9BTD3 319 aa12.57□□□□□ -0.4
TPM1-220ENST00000559556 TRIM5Q9C035 493 aa12.57□□□□□ -0.4
TPM1-220ENST00000559556 LACRTQ9GZZ8 138 aa12.57□□□□□ -0.4
TPM1-220ENST00000559556 MRM3Q9HC36 420 aaKnown RBP12.57□□□□□ -0.4
TPM1-220ENST00000559556 AGPAT4Q9NRZ5 378 aa12.57□□□□□ -0.4
TPM1-220ENST00000559556 IMPACTQ9P2X3 320 aa12.57□□□□□ -0.4
TPM1-220ENST00000559556 NOVA2Q9UNW9 492 aaKnown RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms