RNA–Protein interactions for RNA: ENST00000559494.1

TSPAN3-207, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-207ENST00000559494 SPTBP11277 2137 aa19.61■□□□□ 0.73
TSPAN3-207ENST00000559494 ISM1B1AKI9 464 aa19.61■□□□□ 0.73
TSPAN3-207ENST00000559494 SLC16A5O15375 505 aa19.61■□□□□ 0.73
TSPAN3-207ENST00000559494 PHGDHO43175 533 aaKnown RBP19.61■□□□□ 0.73
TSPAN3-207ENST00000559494 PRICKLE3O43900 615 aaPredicted RBP19.61■□□□□ 0.73
TSPAN3-207ENST00000559494 C8GP07360 202 aa19.61■□□□□ 0.73
TSPAN3-207ENST00000559494 UGT2B7P16662 529 aa19.61■□□□□ 0.73
TSPAN3-207ENST00000559494 NELFEP18615 380 aaKnown RBP19.61■□□□□ 0.73
TSPAN3-207ENST00000559494 CDH3P22223 829 aa19.61■□□□□ 0.73
TSPAN3-207ENST00000559494 MAP4P27816 1152 aaKnown RBP19.61■□□□□ 0.73
TSPAN3-207ENST00000559494 FASTKQ14296 549 aaKnown RBP19.61■□□□□ 0.73
TSPAN3-207ENST00000559494 KIR2DS3Q14952 304 aa19.61■□□□□ 0.73
TSPAN3-207ENST00000559494 ZKSCAN8Q15776 578 aaPredicted RBP19.61■□□□□ 0.73
TSPAN3-207ENST00000559494 UAP1Q16222 522 aaPredicted RBP19.61■□□□□ 0.73
TSPAN3-207ENST00000559494 CYP2A13Q16696 494 aa19.61■□□□□ 0.73
TSPAN3-207ENST00000559494 MROH9Q5TGP6 573 aa19.61■□□□□ 0.73
TSPAN3-207ENST00000559494 IGF2-ASQ6U949 168 aa19.61■□□□□ 0.73
TSPAN3-207ENST00000559494 SPESP1Q6UW49 350 aa19.61■□□□□ 0.73
TSPAN3-207ENST00000559494 LSMEM2Q8N112 164 aa19.61■□□□□ 0.73
TSPAN3-207ENST00000559494 HMGCLL1Q8TB92 370 aa19.61■□□□□ 0.73
TSPAN3-207ENST00000559494 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19.61■□□□□ 0.73
TSPAN3-207ENST00000559494 TSPAN17Q96FV3 270 aa19.61■□□□□ 0.73
TSPAN3-207ENST00000559494 SLC41A2Q96JW4 573 aa19.61■□□□□ 0.73
TSPAN3-207ENST00000559494 RAB11FIP5Q9BXF6 653 aa19.61■□□□□ 0.73
TSPAN3-207ENST00000559494 CCDC86Q9H6F5 360 aaKnown RBP19.61■□□□□ 0.73
TSPAN3-207ENST00000559494 SPATA7Q9P0W8 599 aa19.61■□□□□ 0.73
TSPAN3-207ENST00000559494 LNPEPQ9UIQ6 1025 aa19.61■□□□□ 0.73
TSPAN3-207ENST00000559494 WDFY3Q8IZQ1 3526 aa19.61■□□□□ 0.73
TSPAN3-207ENST00000559494 DMXL2Q8TDJ6 3036 aa19.6■□□□□ 0.73
TSPAN3-207ENST00000559494 SLC9B1P1A6NJY1 282 aa19.6■□□□□ 0.73
TSPAN3-207ENST00000559494 POC1B-GALNT4F8VUJ3 575 aa19.6■□□□□ 0.73
TSPAN3-207ENST00000559494 ERGP11308 486 aa19.6■□□□□ 0.73
TSPAN3-207ENST00000559494 STMN1P16949 149 aa19.6■□□□□ 0.73
TSPAN3-207ENST00000559494 RBMS1P29558 406 aaKnown RBP19.6■□□□□ 0.73
TSPAN3-207ENST00000559494 MAPK10P53779 464 aa19.6■□□□□ 0.73
TSPAN3-207ENST00000559494 RAB10P61026 200 aa19.6■□□□□ 0.73
TSPAN3-207ENST00000559494 SH3BP2P78314 561 aa19.6■□□□□ 0.73
TSPAN3-207ENST00000559494 MC2RQ01718 297 aa19.6■□□□□ 0.73
TSPAN3-207ENST00000559494 BMPR2Q13873 1038 aa19.6■□□□□ 0.73
TSPAN3-207ENST00000559494 SLC29A2Q14542 456 aa19.6■□□□□ 0.73
TSPAN3-207ENST00000559494 PHKG1Q16816 387 aa19.6■□□□□ 0.73
TSPAN3-207ENST00000559494 ANKS6Q68DC2 871 aa19.6■□□□□ 0.73
TSPAN3-207ENST00000559494 TRIM73Q86UV7 250 aa19.6■□□□□ 0.73
TSPAN3-207ENST00000559494 TAX1BP1Q86VP1 789 aa19.6■□□□□ 0.73
TSPAN3-207ENST00000559494 FAM129CQ86XR2 697 aa19.6■□□□□ 0.73
TSPAN3-207ENST00000559494 FAM20CQ8IXL6 584 aa19.6■□□□□ 0.73
TSPAN3-207ENST00000559494 MCOLN3Q8TDD5 553 aa19.6■□□□□ 0.73
TSPAN3-207ENST00000559494 USP7Q93009 1102 aa19.6■□□□□ 0.73
TSPAN3-207ENST00000559494 PITPNM3Q9BZ71 974 aa19.6■□□□□ 0.73
TSPAN3-207ENST00000559494 PARVBQ9HBI1 364 aa19.6■□□□□ 0.73
TSPAN3-207ENST00000559494 SIDT1Q9NXL6 827 aaKnown RBP19.6■□□□□ 0.73
TSPAN3-207ENST00000559494 DKK4Q9UBT3 224 aa19.6■□□□□ 0.73
TSPAN3-207ENST00000559494 A0A1W2PPV9 198 aa19.59■□□□□ 0.73
TSPAN3-207ENST00000559494 CDRT15L2A8MXV6 281 aa19.59■□□□□ 0.73
TSPAN3-207ENST00000559494 B4E171 279 aa19.59■□□□□ 0.73
TSPAN3-207ENST00000559494 PRAMEF10O60809 474 aa19.59■□□□□ 0.73
TSPAN3-207ENST00000559494 SLC16A8O95907 504 aa19.59■□□□□ 0.73
TSPAN3-207ENST00000559494 SYF2O95926 243 aaKnown RBP19.59■□□□□ 0.73
TSPAN3-207ENST00000559494 PVRP15151 417 aa19.59■□□□□ 0.73
TSPAN3-207ENST00000559494 ST6GAL1P15907 406 aa19.59■□□□□ 0.73
TSPAN3-207ENST00000559494 GMPRP36959 345 aa19.59■□□□□ 0.73
TSPAN3-207ENST00000559494 TSPAN7P41732 249 aa19.59■□□□□ 0.73
TSPAN3-207ENST00000559494 SP140Q13342 867 aa19.59■□□□□ 0.73
TSPAN3-207ENST00000559494 ARHGAP19Q14CB8 494 aa19.59■□□□□ 0.73
TSPAN3-207ENST00000559494 CMC1Q7Z7K0 106 aa19.59■□□□□ 0.73
TSPAN3-207ENST00000559494 KMT5CQ86Y97 462 aa19.59■□□□□ 0.73
TSPAN3-207ENST00000559494 CARFQ8N187 725 aa19.59■□□□□ 0.73
TSPAN3-207ENST00000559494 RAB42Q8N4Z0 105 aa19.59■□□□□ 0.73
TSPAN3-207ENST00000559494 ZNF480Q8WV37 535 aa19.59■□□□□ 0.73
TSPAN3-207ENST00000559494 ANKRD7Q92527 254 aa19.59■□□□□ 0.73
TSPAN3-207ENST00000559494 TRAPPC9Q96Q05 1148 aa19.59■□□□□ 0.73
TSPAN3-207ENST00000559494 PAFAH2Q99487 392 aa19.59■□□□□ 0.73
TSPAN3-207ENST00000559494 KLHL25Q9H0H3 589 aa19.59■□□□□ 0.73
TSPAN3-207ENST00000559494 SLC39A1Q9NY26 324 aa19.59■□□□□ 0.73
TSPAN3-207ENST00000559494 CDC7O00311 574 aa19.58■□□□□ 0.73
TSPAN3-207ENST00000559494 ZBTB11O95625 1053 aaPredicted RBP19.58■□□□□ 0.73
TSPAN3-207ENST00000559494 INHBAP08476 426 aa19.58■□□□□ 0.73
TSPAN3-207ENST00000559494 FOLR1P15328 257 aa19.58■□□□□ 0.73
TSPAN3-207ENST00000559494 CYP2A7P20853 494 aa19.58■□□□□ 0.73
TSPAN3-207ENST00000559494 GCAP28676 217 aa19.58■□□□□ 0.73
TSPAN3-207ENST00000559494 MLLT3P42568 568 aaPredicted RBP19.58■□□□□ 0.73
TSPAN3-207ENST00000559494 MSH2P43246 934 aa19.58■□□□□ 0.73
TSPAN3-207ENST00000559494 PNLIPRP1P54315 467 aa19.58■□□□□ 0.73
TSPAN3-207ENST00000559494 KCNAB1Q14722 419 aa19.58■□□□□ 0.73
TSPAN3-207ENST00000559494 SLC5A12Q1EHB4 618 aa19.58■□□□□ 0.73
TSPAN3-207ENST00000559494 WDR93Q6P2C0 686 aa19.58■□□□□ 0.73
TSPAN3-207ENST00000559494 D2HGDHQ8N465 521 aa19.58■□□□□ 0.73
TSPAN3-207ENST00000559494 SPATA6LQ8N4H0 392 aa19.58■□□□□ 0.73
TSPAN3-207ENST00000559494 DCAKDQ8WVC6 231 aa19.58■□□□□ 0.73
TSPAN3-207ENST00000559494 PMEPA1Q969W9 287 aa19.58■□□□□ 0.73
TSPAN3-207ENST00000559494 UBXN10Q96LJ8 280 aa19.58■□□□□ 0.73
TSPAN3-207ENST00000559494 TAAR9Q96RI9 348 aa19.58■□□□□ 0.73
TSPAN3-207ENST00000559494 FBXO8Q9NRD0 319 aa19.58■□□□□ 0.73
TSPAN3-207ENST00000559494 MAP1BP46821 2468 aaKnown RBP19.58■□□□□ 0.72
TSPAN3-207ENST00000559494 C9orf172C9J069 976 aa19.57■□□□□ 0.72
TSPAN3-207ENST00000559494 E7ENX8 843 aa19.57■□□□□ 0.72
TSPAN3-207ENST00000559494 SLC35E2BP0CK96 405 aa19.57■□□□□ 0.72
TSPAN3-207ENST00000559494 CCDC166P0CW27 439 aa19.57■□□□□ 0.72
TSPAN3-207ENST00000559494 OAS2P29728 719 aaKnown RBP19.57■□□□□ 0.72
TSPAN3-207ENST00000559494 SLC5A2P31639 672 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms