RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 RPL10P27635 214 aaKnown RBP16.11■□□□□ 0.17
TPM1-219ENST00000559397 WASH2PQ6VEQ5 465 aa16.11■□□□□ 0.17
TPM1-219ENST00000559397 RPS27LQ71UM5 84 aaKnown RBP16.11■□□□□ 0.17
TPM1-219ENST00000559397 GKN2Q86XP6 184 aa16.11■□□□□ 0.17
TPM1-219ENST00000559397 KIRREL3Q8IZU9 778 aa16.11■□□□□ 0.17
TPM1-219ENST00000559397 MINDY1Q8N5J2 469 aa16.11■□□□□ 0.17
TPM1-219ENST00000559397 WASH6PQ9NQA3 447 aa16.11■□□□□ 0.17
TPM1-219ENST00000559397 PRDM8Q9NQV8 689 aa16.11■□□□□ 0.17
TPM1-219ENST00000559397 SAR1AQ9NR31 198 aa16.11■□□□□ 0.17
TPM1-219ENST00000559397 RAPGEFL1Q9UHV5 662 aa16.11■□□□□ 0.17
TPM1-219ENST00000559397 WDR37Q9Y2I8 494 aa16.11■□□□□ 0.17
TPM1-219ENST00000559397 OARD1Q9Y530 152 aa16.11■□□□□ 0.17
TPM1-219ENST00000559397 LRRC14BA6NHZ5 514 aa16.1■□□□□ 0.17
TPM1-219ENST00000559397 UBFD1O14562 309 aaKnown RBP16.1■□□□□ 0.17
TPM1-219ENST00000559397 CCDC22O60826 627 aa16.1■□□□□ 0.17
TPM1-219ENST00000559397 CCT8P50990 548 aa16.1■□□□□ 0.17
TPM1-219ENST00000559397 VWA5B1Q5TIE3 1220 aa16.1■□□□□ 0.17
TPM1-219ENST00000559397 CAPRIN2Q6IMN6 1127 aaKnown RBP16.1■□□□□ 0.17
TPM1-219ENST00000559397 ABRAXAS1Q6UWZ7 409 aa16.1■□□□□ 0.17
TPM1-219ENST00000559397 CUZD1Q86UP6 607 aa16.1■□□□□ 0.17
TPM1-219ENST00000559397 PDPRQ8NCN5 879 aa16.1■□□□□ 0.17
TPM1-219ENST00000559397 FAR2Q96K12 515 aa16.1■□□□□ 0.17
TPM1-219ENST00000559397 SHCBP1LQ9BZQ2 653 aa16.1■□□□□ 0.17
TPM1-219ENST00000559397 NMUR2Q9GZQ4 415 aa16.1■□□□□ 0.17
TPM1-219ENST00000559397 RDH14Q9HBH5 336 aa16.1■□□□□ 0.17
TPM1-219ENST00000559397 TNFRSF12AQ9NP84 129 aa16.1■□□□□ 0.17
TPM1-219ENST00000559397 DNAAF2Q9NVR5 837 aaKnown RBP16.1■□□□□ 0.17
TPM1-219ENST00000559397 CDX4O14627 284 aaPredicted RBP16.09■□□□□ 0.17
TPM1-219ENST00000559397 SNX2O60749 519 aa16.09■□□□□ 0.17
TPM1-219ENST00000559397 SERPINA6P08185 405 aa16.09■□□□□ 0.17
TPM1-219ENST00000559397 ZNF883P0CG24 379 aa16.09■□□□□ 0.17
TPM1-219ENST00000559397 MPC1LP0DKB6 136 aa16.09■□□□□ 0.17
TPM1-219ENST00000559397 T-ENOLP0DO92 83 aa16.09■□□□□ 0.17
TPM1-219ENST00000559397 ACADLP28330 430 aa16.09■□□□□ 0.17
TPM1-219ENST00000559397 EEF1DP29692 281 aaKnown RBP16.09■□□□□ 0.17
TPM1-219ENST00000559397 ACTN3Q08043 901 aaPredicted RBP16.09■□□□□ 0.17
TPM1-219ENST00000559397 CLCA4Q14CN2 919 aa16.09■□□□□ 0.17
TPM1-219ENST00000559397 KRT72Q14CN4 511 aa16.09■□□□□ 0.17
TPM1-219ENST00000559397 UAP1L1Q3KQV9 507 aa16.09■□□□□ 0.17
TPM1-219ENST00000559397 SH2D4BQ5SQS7 431 aa16.09■□□□□ 0.17
TPM1-219ENST00000559397 ANKS6Q68DC2 871 aa16.09■□□□□ 0.17
TPM1-219ENST00000559397 NEK10Q6ZWH5 1172 aa16.09■□□□□ 0.17
TPM1-219ENST00000559397 RASGRP3Q8IV61 690 aa16.09■□□□□ 0.17
TPM1-219ENST00000559397 SPDYE1Q8NFV5 336 aaPredicted RBP16.09■□□□□ 0.17
TPM1-219ENST00000559397 AGR3Q8TD06 166 aa16.09■□□□□ 0.17
TPM1-219ENST00000559397 ZNF483Q8TF39 744 aaPredicted RBP16.09■□□□□ 0.17
TPM1-219ENST00000559397 DLG3Q92796 817 aa16.09■□□□□ 0.17
TPM1-219ENST00000559397 PRR11Q96HE9 360 aaPredicted RBP16.09■□□□□ 0.17
TPM1-219ENST00000559397 RILPQ96NA2 401 aa16.09■□□□□ 0.17
TPM1-219ENST00000559397 RXFP3Q9NSD7 469 aa16.09■□□□□ 0.17
TPM1-219ENST00000559397 CD274Q9NZQ7 290 aa16.09■□□□□ 0.17
TPM1-219ENST00000559397 SCHIP1Q9P0W5 487 aaPredicted RBP16.09■□□□□ 0.17
TPM1-219ENST00000559397 ADAMTS6Q9UKP5 1117 aa16.09■□□□□ 0.17
TPM1-219ENST00000559397 PSMD13Q9UNM6 376 aa16.09■□□□□ 0.17
TPM1-219ENST00000559397 ANKRD12Q6UB98 2062 aa16.08■□□□□ 0.17
TPM1-219ENST00000559397 FFAR2O15552 330 aa16.08■□□□□ 0.17
TPM1-219ENST00000559397 PCDHGA12O60330 932 aa16.08■□□□□ 0.17
TPM1-219ENST00000559397 DIAPH2O60879 1101 aa16.08■□□□□ 0.17
TPM1-219ENST00000559397 FGF4P08620 206 aa16.08■□□□□ 0.17
TPM1-219ENST00000559397 F3P13726 295 aa16.08■□□□□ 0.17
TPM1-219ENST00000559397 ATXN3P54252 364 aaPredicted RBP16.08■□□□□ 0.17
TPM1-219ENST00000559397 CDH13P55290 713 aa16.08■□□□□ 0.17
TPM1-219ENST00000559397 NCALDP61601 193 aa16.08■□□□□ 0.17
TPM1-219ENST00000559397 PCBP2Q15366 365 aaKnown RBP eCLIP16.08■□□□□ 0.172e-12■■■■□ 19.4
TPM1-219ENST00000559397 SLC9B1Q4ZJI4 515 aa16.08■□□□□ 0.17
TPM1-219ENST00000559397 METTL21CQ5VZV1 264 aa16.08■□□□□ 0.17
TPM1-219ENST00000559397 ASCL5Q7RTU5 278 aa16.08■□□□□ 0.17
TPM1-219ENST00000559397 PDZD3Q86UT5 571 aa16.08■□□□□ 0.17
TPM1-219ENST00000559397 GATAD2AQ86YP4 633 aa16.08■□□□□ 0.17
TPM1-219ENST00000559397 SFTPA2Q8IWL1 248 aa16.08■□□□□ 0.17
TPM1-219ENST00000559397 FAM46DQ8NEK8 389 aa16.08■□□□□ 0.17
TPM1-219ENST00000559397 PTBP2Q9UKA9 531 aaKnown RBP16.08■□□□□ 0.17
TPM1-219ENST00000559397 PCTPQ9UKL6 214 aa16.08■□□□□ 0.17
TPM1-219ENST00000559397 ARID1BQ8NFD5 2236 aaPredicted RBP16.08■□□□□ 0.16
TPM1-219ENST00000559397 PDZK1P1A8MUH7 402 aa16.08■□□□□ 0.16
TPM1-219ENST00000559397 CAPN14A8MX76 684 aa16.08■□□□□ 0.16
TPM1-219ENST00000559397 TMEM233B4DJY2 109 aa16.08■□□□□ 0.16
TPM1-219ENST00000559397 ATP5HO75947 161 aa16.08■□□□□ 0.16
TPM1-219ENST00000559397 UNC5CO95185 931 aa16.08■□□□□ 0.16
TPM1-219ENST00000559397 ANXA6P08133 673 aa16.08■□□□□ 0.16
TPM1-219ENST00000559397 AGTR2P50052 363 aa16.08■□□□□ 0.16
TPM1-219ENST00000559397 SH3BP2P78314 561 aa16.08■□□□□ 0.16
TPM1-219ENST00000559397 CLCQ05315 142 aa16.08■□□□□ 0.16
TPM1-219ENST00000559397 DEFB133Q30KQ1 61 aa16.08■□□□□ 0.16
TPM1-219ENST00000559397 CDKL4Q5MAI5 379 aa16.08■□□□□ 0.16
TPM1-219ENST00000559397 IYDQ6PHW0 289 aa16.08■□□□□ 0.16
TPM1-219ENST00000559397 OGFOD3Q6PK18 319 aa16.08■□□□□ 0.16
TPM1-219ENST00000559397 PRR23CQ6ZRP0 262 aa16.08■□□□□ 0.16
TPM1-219ENST00000559397 FRA10AC1Q70Z53 315 aa16.08■□□□□ 0.16
TPM1-219ENST00000559397 NAGSQ8N159 534 aa16.08■□□□□ 0.16
TPM1-219ENST00000559397 ZDHHC1Q8WTX9 485 aa16.08■□□□□ 0.16
TPM1-219ENST00000559397 MAELQ96JY0 434 aaKnown RBP16.08■□□□□ 0.16
TPM1-219ENST00000559397 NSUN5Q96P11 429 aaKnown RBP16.08■□□□□ 0.16
TPM1-219ENST00000559397 INSM2Q96T92 566 aaPredicted RBP16.08■□□□□ 0.16
TPM1-219ENST00000559397 CCDC28BQ9BUN5 200 aa16.08■□□□□ 0.16
TPM1-219ENST00000559397 TSR3Q9UJK0 312 aaKnown RBP16.08■□□□□ 0.16
TPM1-219ENST00000559397 DOLKQ9UPQ8 538 aa16.08■□□□□ 0.16
TPM1-219ENST00000559397 TRAF6Q9Y4K3 522 aa16.08■□□□□ 0.16
TPM1-219ENST00000559397 NCF1BA6NI72 391 aaPredicted RBP16.07■□□□□ 0.16
TPM1-219ENST00000559397 NCF1CA8MVU1 366 aaPredicted RBP16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms