RNA–Protein interactions for RNA: ENST00000559092.1

SMAD3-210, Transcript of SMAD family member 3, humanhuman

TSL 4 BASIC

Gene SMAD3, Length 584 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-210ENST00000559092 THOC5Q13769 683 aaKnown RBP16.97■□□□□ 0.31
SMAD3-210ENST00000559092 RNASEH2BQ5TBB1 312 aaKnown RBP16.97■□□□□ 0.31
SMAD3-210ENST00000559092 PCGF5Q86SE9 256 aa16.97■□□□□ 0.31
SMAD3-210ENST00000559092 DNAJC22Q8N4W6 341 aa16.97■□□□□ 0.31
SMAD3-210ENST00000559092 HMGCLL1Q8TB92 370 aa16.97■□□□□ 0.31
SMAD3-210ENST00000559092 CALML6Q8TD86 181 aa16.97■□□□□ 0.31
SMAD3-210ENST00000559092 SKA2Q8WVK7 121 aaPredicted RBP16.97■□□□□ 0.31
SMAD3-210ENST00000559092 ZNF669Q96BR6 464 aaPredicted RBP16.97■□□□□ 0.31
SMAD3-210ENST00000559092 SIGLEC10Q96LC7 697 aa16.97■□□□□ 0.31
SMAD3-210ENST00000559092 C17orf62Q9BQA9 187 aa16.97■□□□□ 0.31
SMAD3-210ENST00000559092 NLNQ9BYT8 704 aa16.97■□□□□ 0.31
SMAD3-210ENST00000559092 SLC7A5P2Q9GIP4 190 aa16.97■□□□□ 0.31
SMAD3-210ENST00000559092 INTS7Q9NVH2 962 aaKnown RBP16.97■□□□□ 0.31
SMAD3-210ENST00000559092 CDC14CA4D256 554 aa16.96■□□□□ 0.31
SMAD3-210ENST00000559092 H3BMH7 237 aa16.96■□□□□ 0.31
SMAD3-210ENST00000559092 FURINP09958 794 aa16.96■□□□□ 0.31
SMAD3-210ENST00000559092 AGXTP21549 392 aa16.96■□□□□ 0.31
SMAD3-210ENST00000559092 LONRF1Q17RB8 773 aa16.96■□□□□ 0.31
SMAD3-210ENST00000559092 PAPD7Q5XG87 772 aaKnown RBP16.96■□□□□ 0.31
SMAD3-210ENST00000559092 ZNF470Q6ECI4 717 aa16.96■□□□□ 0.31
SMAD3-210ENST00000559092 TLDC1Q6P9B6 456 aa16.96■□□□□ 0.31
SMAD3-210ENST00000559092 APLFQ8IW19 511 aaPredicted RBP16.96■□□□□ 0.31
SMAD3-210ENST00000559092 SYTL1Q8IYJ3 562 aa16.96■□□□□ 0.31
SMAD3-210ENST00000559092 ZBTB2Q8N680 514 aa16.96■□□□□ 0.31
SMAD3-210ENST00000559092 ZUFSPQ96AP4 578 aa16.96■□□□□ 0.31
SMAD3-210ENST00000559092 RUNDC3BQ96NL0 473 aa16.96■□□□□ 0.31
SMAD3-210ENST00000559092 TRIM56Q9BRZ2 755 aaKnown RBP16.96■□□□□ 0.31
SMAD3-210ENST00000559092 PLCL2Q9UPR0 1127 aa16.96■□□□□ 0.31
SMAD3-210ENST00000559092 MAD1L1Q9Y6D9 718 aa16.96■□□□□ 0.31
SMAD3-210ENST00000559092 FAM169AQ9Y6X4 670 aa16.96■□□□□ 0.31
SMAD3-210ENST00000559092 CTAGE9A4FU28 777 aa16.95■□□□□ 0.3
SMAD3-210ENST00000559092 TARM1B6A8C7 271 aa16.95■□□□□ 0.3
SMAD3-210ENST00000559092 E5RI56 91 aa16.95■□□□□ 0.3
SMAD3-210ENST00000559092 SUV39H1O43463 412 aa16.95■□□□□ 0.3
SMAD3-210ENST00000559092 SLC28A2O43868 658 aa16.95■□□□□ 0.3
SMAD3-210ENST00000559092 NIPSNAP2O75323 286 aa16.95■□□□□ 0.3
SMAD3-210ENST00000559092 CD63P08962 238 aa16.95■□□□□ 0.3
SMAD3-210ENST00000559092 PMS2P54278 862 aa16.95■□□□□ 0.3
SMAD3-210ENST00000559092 PTK6Q13882 451 aa16.95■□□□□ 0.3
SMAD3-210ENST00000559092 RHBDD2Q6NTF9 364 aa16.95■□□□□ 0.3
SMAD3-210ENST00000559092 SYDE1Q6ZW31 735 aaPredicted RBP16.95■□□□□ 0.3
SMAD3-210ENST00000559092 NEK10Q6ZWH5 1172 aa16.95■□□□□ 0.3
SMAD3-210ENST00000559092 C9orf43Q8TAL5 461 aaPredicted RBP16.95■□□□□ 0.3
SMAD3-210ENST00000559092 PROKR1Q8TCW9 393 aa16.95■□□□□ 0.3
SMAD3-210ENST00000559092 ABHD17AQ96GS6 310 aa16.95■□□□□ 0.3
SMAD3-210ENST00000559092 IL17FQ96PD4 163 aa16.95■□□□□ 0.3
SMAD3-210ENST00000559092 NAT9Q9BTE0 207 aa16.95■□□□□ 0.3
SMAD3-210ENST00000559092 DHRS4Q9BTZ2 278 aa16.95■□□□□ 0.3
SMAD3-210ENST00000559092 DDX47Q9H0S4 455 aaKnown RBP16.95■□□□□ 0.3
SMAD3-210ENST00000559092 ENAMQ9NRM1 1142 aa16.95■□□□□ 0.3
SMAD3-210ENST00000559092 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.95■□□□□ 0.3
SMAD3-210ENST00000559092 ASIC3Q9UHC3 531 aa16.95■□□□□ 0.3
SMAD3-210ENST00000559092 SRPK3Q9UPE1 567 aa16.95■□□□□ 0.3
SMAD3-210ENST00000559092 KLK4Q9Y5K2 254 aa16.95■□□□□ 0.3
SMAD3-210ENST00000559092 NFS1Q9Y697 457 aa16.95■□□□□ 0.3
SMAD3-210ENST00000559092 COMMD10Q9Y6G5 202 aa16.95■□□□□ 0.3
SMAD3-210ENST00000559092 MKRN2OSH3BPM6 223 aa16.94■□□□□ 0.3
SMAD3-210ENST00000559092 ZSCAN9O15535 394 aaPredicted RBP16.94■□□□□ 0.3
SMAD3-210ENST00000559092 PRICKLE3O43900 615 aaPredicted RBP16.94■□□□□ 0.3
SMAD3-210ENST00000559092 TTC4O95801 387 aa16.94■□□□□ 0.3
SMAD3-210ENST00000559092 CAPN1P07384 714 aa16.94■□□□□ 0.3
SMAD3-210ENST00000559092 CLCN7P51798 805 aa16.94■□□□□ 0.3
SMAD3-210ENST00000559092 GNG11P61952 73 aa16.94■□□□□ 0.3
SMAD3-210ENST00000559092 CTBP1Q13363 440 aa16.94■□□□□ 0.3
SMAD3-210ENST00000559092 SF1Q15637 639 aaKnown RBP16.94■□□□□ 0.3
SMAD3-210ENST00000559092 CYP2A13Q16696 494 aa16.94■□□□□ 0.3
SMAD3-210ENST00000559092 TTLL9Q3SXZ7 439 aa16.94■□□□□ 0.3
SMAD3-210ENST00000559092 ZC3H12BQ5HYM0 836 aaKnown RBP16.94■□□□□ 0.3
SMAD3-210ENST00000559092 ZNF385CQ66K41 422 aaPredicted RBP16.94■□□□□ 0.3
SMAD3-210ENST00000559092 LCN10Q6JVE6 187 aa16.94■□□□□ 0.3
SMAD3-210ENST00000559092 ATG14Q6ZNE5 492 aa16.94■□□□□ 0.3
SMAD3-210ENST00000559092 MCATQ8IVS2 390 aaKnown RBP16.94■□□□□ 0.3
SMAD3-210ENST00000559092 AGGF1Q8N302 714 aaeCLIP16.94■□□□□ 0.3
SMAD3-210ENST00000559092 C2orf73Q8N5S3 287 aaPredicted RBP16.94■□□□□ 0.3
SMAD3-210ENST00000559092 ENDOVQ8N8Q3 282 aaKnown RBP16.94■□□□□ 0.3
SMAD3-210ENST00000559092 LMNTD1Q8N9Z9 388 aa16.94■□□□□ 0.3
SMAD3-210ENST00000559092 GABPB2Q8TAK5 448 aaPredicted RBP16.94■□□□□ 0.3
SMAD3-210ENST00000559092 DENND1AQ8TEH3 1009 aa16.94■□□□□ 0.3
SMAD3-210ENST00000559092 KCNJ9Q92806 393 aa16.94■□□□□ 0.3
SMAD3-210ENST00000559092 RUFY1Q96T51 708 aa16.94■□□□□ 0.3
SMAD3-210ENST00000559092 SPRTNQ9H040 489 aaPredicted RBP16.94■□□□□ 0.3
SMAD3-210ENST00000559092 CCDC68Q9H2F9 335 aa16.94■□□□□ 0.3
SMAD3-210ENST00000559092 FAM114A2Q9NRY5 505 aa16.94■□□□□ 0.3
SMAD3-210ENST00000559092 C20orf96Q9NUD7 363 aaPredicted RBP16.94■□□□□ 0.3
SMAD3-210ENST00000559092 EURLQ9NYK6 297 aa16.94■□□□□ 0.3
SMAD3-210ENST00000559092 IL1RAPL1Q9NZN1 696 aa16.94■□□□□ 0.3
SMAD3-210ENST00000559092 SPATA7Q9P0W8 599 aa16.94■□□□□ 0.3
SMAD3-210ENST00000559092 TCFL5Q9UL49 500 aa16.94■□□□□ 0.3
SMAD3-210ENST00000559092 MAN2B2Q9Y2E5 1009 aa16.94■□□□□ 0.3
SMAD3-210ENST00000559092 PIKFYVEQ9Y2I7 2098 aa16.93■□□□□ 0.3
SMAD3-210ENST00000559092 USP27XA6NNY8 438 aa16.93■□□□□ 0.3
SMAD3-210ENST00000559092 C9J4A7 227 aa16.93■□□□□ 0.3
SMAD3-210ENST00000559092 SMAPO00193 183 aa16.93■□□□□ 0.3
SMAD3-210ENST00000559092 DNALI1O14645 258 aaPredicted RBP16.93■□□□□ 0.3
SMAD3-210ENST00000559092 HCRTR1O43613 425 aa16.93■□□□□ 0.3
SMAD3-210ENST00000559092 RFPL1O75677 317 aa16.93■□□□□ 0.3
SMAD3-210ENST00000559092 PGAM1P18669 254 aa16.93■□□□□ 0.3
SMAD3-210ENST00000559092 MAGP20916 626 aa16.93■□□□□ 0.3
SMAD3-210ENST00000559092 HSD17B2P37059 387 aa16.93■□□□□ 0.3
SMAD3-210ENST00000559092 PTGIRP43119 386 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms