RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 GLT6D1Q7Z4J2 308 aa4.97□□□□□ -1.61
SPG11-208ENST00000558155 DAAM2Q86T65 1068 aa4.97□□□□□ -1.61
SPG11-208ENST00000558155 SPPL2CQ8IUH8 684 aa4.97□□□□□ -1.61
SPG11-208ENST00000558155 MCATQ8IVS2 390 aaKnown RBP4.97□□□□□ -1.61
SPG11-208ENST00000558155 TMEM151BQ8IW70 566 aa4.97□□□□□ -1.61
SPG11-208ENST00000558155 MMP21Q8N119 569 aa4.97□□□□□ -1.61
SPG11-208ENST00000558155 EID3Q8N140 333 aa4.97□□□□□ -1.61
SPG11-208ENST00000558155 TTC29Q8NA56 475 aaPredicted RBP4.97□□□□□ -1.61
SPG11-208ENST00000558155 BLOC1S5Q8TDH9 187 aa4.97□□□□□ -1.61
SPG11-208ENST00000558155 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.97□□□□□ -1.61
SPG11-208ENST00000558155 ULK4Q96C45 1275 aa4.97□□□□□ -1.61
SPG11-208ENST00000558155 FAF2Q96CS3 445 aa4.97□□□□□ -1.61
SPG11-208ENST00000558155 RNF157Q96PX1 679 aa4.97□□□□□ -1.61
SPG11-208ENST00000558155 OR2A14Q96R47 310 aa4.97□□□□□ -1.61
SPG11-208ENST00000558155 CEP41Q9BYV8 373 aa4.97□□□□□ -1.61
SPG11-208ENST00000558155 NUP62CLQ9H1M0 184 aa4.97□□□□□ -1.61
SPG11-208ENST00000558155 OR52A5Q9H2C5 316 aa4.97□□□□□ -1.61
SPG11-208ENST00000558155 SOX17Q9H6I2 414 aaPredicted RBP4.97□□□□□ -1.61
SPG11-208ENST00000558155 ZNF160Q9HCG1 818 aa4.97□□□□□ -1.61
SPG11-208ENST00000558155 EURLQ9NYK6 297 aa4.97□□□□□ -1.61
SPG11-208ENST00000558155 STMN3Q9NZ72 180 aa4.97□□□□□ -1.61
SPG11-208ENST00000558155 UBP1Q9NZI7 540 aa4.97□□□□□ -1.61
SPG11-208ENST00000558155 PTGFRNQ9P2B2 879 aa4.97□□□□□ -1.61
SPG11-208ENST00000558155 POLG2Q9UHN1 485 aa4.97□□□□□ -1.61
SPG11-208ENST00000558155 HEY1Q9Y5J3 304 aa4.97□□□□□ -1.61
SPG11-208ENST00000558155 CACNA1CQ13936 2221 aa4.97□□□□□ -1.61
SPG11-208ENST00000558155 VSTM2BA6NLU5 285 aa4.96□□□□□ -1.62
SPG11-208ENST00000558155 FOXO6A8MYZ6 492 aa4.96□□□□□ -1.62
SPG11-208ENST00000558155 APOL1O14791 398 aa4.96□□□□□ -1.62
SPG11-208ENST00000558155 DSCR3O14972 297 aa4.96□□□□□ -1.62
SPG11-208ENST00000558155 HCRTR1O43613 425 aa4.96□□□□□ -1.62
SPG11-208ENST00000558155 BUD23O43709 281 aaKnown RBP4.96□□□□□ -1.62
SPG11-208ENST00000558155 PRAMEF2O60811 474 aa4.96□□□□□ -1.62
SPG11-208ENST00000558155 SRP72O76094 671 aaKnown RBP4.96□□□□□ -1.62
SPG11-208ENST00000558155 ZRANB2O95218 330 aaKnown RBP eCLIP4.96□□□□□ -1.62
SPG11-208ENST00000558155 BMP10O95393 424 aa4.96□□□□□ -1.62
SPG11-208ENST00000558155 PRAMEF1O95521 474 aa4.96□□□□□ -1.62
SPG11-208ENST00000558155 WDPCPO95876 746 aa4.96□□□□□ -1.62
SPG11-208ENST00000558155 CYP1A2P05177 515 aa4.96□□□□□ -1.62
SPG11-208ENST00000558155 SERPINA7P05543 415 aa4.96□□□□□ -1.62
SPG11-208ENST00000558155 CTSBP07858 339 aa4.96□□□□□ -1.62
SPG11-208ENST00000558155 CHRM5P08912 532 aaPredicted RBP4.96□□□□□ -1.62
SPG11-208ENST00000558155 GSTM1P09488 218 aa4.96□□□□□ -1.62
SPG11-208ENST00000558155 PRR35P0CG20 571 aa4.96□□□□□ -1.62
SPG11-208ENST00000558155 VSIG8P0DPA2 414 aa4.96□□□□□ -1.62
SPG11-208ENST00000558155 SKILP12757 684 aa4.96□□□□□ -1.62
SPG11-208ENST00000558155 DRD2P14416 443 aa4.96□□□□□ -1.62
SPG11-208ENST00000558155 PTPN3P26045 913 aa4.96□□□□□ -1.62
SPG11-208ENST00000558155 PDHA2P29803 388 aa4.96□□□□□ -1.62
SPG11-208ENST00000558155 SOX11P35716 441 aa4.96□□□□□ -1.62
SPG11-208ENST00000558155 OR1D4P47884 311 aa4.96□□□□□ -1.62
SPG11-208ENST00000558155 PRLHRP49683 370 aa4.96□□□□□ -1.62
SPG11-208ENST00000558155 TMPRSS15P98073 1019 aa4.96□□□□□ -1.62
SPG11-208ENST00000558155 FANCCQ00597 558 aa4.96□□□□□ -1.62
SPG11-208ENST00000558155 GSTM4Q03013 218 aa4.96□□□□□ -1.62
SPG11-208ENST00000558155 BOP1Q14137 746 aaKnown RBP4.96□□□□□ -1.62
SPG11-208ENST00000558155 GRM7Q14831 915 aa4.96□□□□□ -1.62
SPG11-208ENST00000558155 KIR2DS3Q14952 304 aa4.96□□□□□ -1.62
SPG11-208ENST00000558155 TAF1AQ15573 450 aaPredicted RBP4.96□□□□□ -1.62
SPG11-208ENST00000558155 SLC1A5Q15758 541 aa4.96□□□□□ -1.62
SPG11-208ENST00000558155 LONRF1Q17RB8 773 aa4.96□□□□□ -1.62
SPG11-208ENST00000558155 ODF2Q5BJF6 829 aa4.96□□□□□ -1.62
SPG11-208ENST00000558155 TFDP3Q5H9I0 405 aa4.96□□□□□ -1.62
SPG11-208ENST00000558155 ABHD17BQ5VST6 288 aa4.96□□□□□ -1.62
SPG11-208ENST00000558155 CES4AQ5XG92 561 aa4.96□□□□□ -1.62
SPG11-208ENST00000558155 ATG9BQ674R7 924 aa4.96□□□□□ -1.62
SPG11-208ENST00000558155 RIPOR1Q6ZS17 1223 aa4.96□□□□□ -1.62
SPG11-208ENST00000558155 TRIM73Q86UV7 250 aa4.96□□□□□ -1.62
SPG11-208ENST00000558155 TGIF2LYQ8IUE0 185 aa4.96□□□□□ -1.62
SPG11-208ENST00000558155 TBC1D21Q8IYX1 336 aa4.96□□□□□ -1.62
SPG11-208ENST00000558155 LILRA3Q8N6C8 439 aaPredicted RBP4.96□□□□□ -1.62
SPG11-208ENST00000558155 BRIX1Q8TDN6 353 aaKnown RBP4.96□□□□□ -1.62
SPG11-208ENST00000558155 THAP3Q8WTV1 239 aaPredicted RBP4.96□□□□□ -1.62
SPG11-208ENST00000558155 CA5BP1Q8WTZ4 195 aa4.96□□□□□ -1.62
SPG11-208ENST00000558155 PSMF1Q92530 271 aa4.96□□□□□ -1.62
SPG11-208ENST00000558155 MIEF2Q96C03 454 aa4.96□□□□□ -1.62
SPG11-208ENST00000558155 MAGED4Q96JG8 741 aa4.96□□□□□ -1.62
SPG11-208ENST00000558155 TEKT5Q96M29 485 aa4.96□□□□□ -1.62
SPG11-208ENST00000558155 COPS8Q99627 209 aa4.96□□□□□ -1.62
SPG11-208ENST00000558155 HGH1Q9BTY7 390 aa4.96□□□□□ -1.62
SPG11-208ENST00000558155 CRB3Q9BUF7 120 aa4.96□□□□□ -1.62
SPG11-208ENST00000558155 RNF32Q9H0A6 362 aa4.96□□□□□ -1.62
SPG11-208ENST00000558155 THAP2Q9H0W7 228 aa4.96□□□□□ -1.62
SPG11-208ENST00000558155 COG4Q9H9E3 785 aa4.96□□□□□ -1.62
SPG11-208ENST00000558155 ZNF304Q9HCX3 659 aa4.96□□□□□ -1.62
SPG11-208ENST00000558155 CUTCQ9NTM9 273 aa4.96□□□□□ -1.62
SPG11-208ENST00000558155 INTS7Q9NVH2 962 aaKnown RBP4.96□□□□□ -1.62
SPG11-208ENST00000558155 COQ3Q9NZJ6 369 aa4.96□□□□□ -1.62
SPG11-208ENST00000558155 OR6C2Q9NZP2 312 aa4.96□□□□□ -1.62
SPG11-208ENST00000558155 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.96□□□□□ -1.62
SPG11-208ENST00000558155 ZNF282Q9UDV7 671 aaPredicted RBP4.96□□□□□ -1.62
SPG11-208ENST00000558155 LCMT1Q9UIC8 334 aa4.96□□□□□ -1.62
SPG11-208ENST00000558155 TEKT2Q9UIF3 430 aa4.96□□□□□ -1.62
SPG11-208ENST00000558155 CRLS1Q9UJA2 301 aa4.96□□□□□ -1.62
SPG11-208ENST00000558155 EDARQ9UNE0 448 aa4.96□□□□□ -1.62
SPG11-208ENST00000558155 ICKQ9UPZ9 632 aa4.96□□□□□ -1.62
SPG11-208ENST00000558155 ASF1AQ9Y294 204 aa4.96□□□□□ -1.62
SPG11-208ENST00000558155 ZNF835Q9Y2P0 537 aa4.96□□□□□ -1.62
SPG11-208ENST00000558155 TDRKHQ9Y2W6 561 aaKnown RBP4.96□□□□□ -1.62
SPG11-208ENST00000558155 MEMO1Q9Y316 297 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms