RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-210ENST00000557431 TBC1D21Q8IYX1 336 aa13.53□□□□□ -0.24
SLIRP-210ENST00000557431 LINC01555Q8NAE3 123 aa13.53□□□□□ -0.24
SLIRP-210ENST00000557431 ST6GALNAC3Q8NDV1 305 aa13.53□□□□□ -0.24
SLIRP-210ENST00000557431 OR5K2Q8NHB8 316 aa13.53□□□□□ -0.24
SLIRP-210ENST00000557431 ALG3Q92685 438 aa13.53□□□□□ -0.24
SLIRP-210ENST00000557431 SPSB2Q99619 263 aa13.53□□□□□ -0.24
SLIRP-210ENST00000557431 BARD1Q99728 777 aaKnown RBP13.53□□□□□ -0.24
SLIRP-210ENST00000557431 WDR77Q9BQA1 342 aaPredicted RBP13.53□□□□□ -0.24
SLIRP-210ENST00000557431 C17orf62Q9BQA9 187 aa13.53□□□□□ -0.24
SLIRP-210ENST00000557431 ARNT2Q9HBZ2 717 aa13.53□□□□□ -0.24
SLIRP-210ENST00000557431 CTSFQ9UBX1 484 aa13.53□□□□□ -0.24
SLIRP-210ENST00000557431 SLC2A6Q9UGQ3 507 aa13.53□□□□□ -0.24
SLIRP-210ENST00000557431 SRPK3Q9UPE1 567 aa13.53□□□□□ -0.24
SLIRP-210ENST00000557431 PLCL2Q9UPR0 1127 aa13.53□□□□□ -0.24
SLIRP-210ENST00000557431 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.53□□□□□ -0.24
SLIRP-210ENST00000557431 DUSP10Q9Y6W6 482 aa13.53□□□□□ -0.24
SLIRP-210ENST00000557431 MAU2Q9Y6X3 613 aa13.53□□□□□ -0.24
SLIRP-210ENST00000557431 IQCF5A8MTL0 148 aa13.52□□□□□ -0.25
SLIRP-210ENST00000557431 MED26O95402 600 aa13.52□□□□□ -0.25
SLIRP-210ENST00000557431 PKLRP30613 574 aa13.52□□□□□ -0.25
SLIRP-210ENST00000557431 NSG1P42857 185 aa13.52□□□□□ -0.25
SLIRP-210ENST00000557431 Q0VFX4 171 aa13.52□□□□□ -0.25
SLIRP-210ENST00000557431 AIMP2Q13155 320 aaKnown RBP13.52□□□□□ -0.25
SLIRP-210ENST00000557431 TBX2Q13207 712 aaPredicted RBP13.52□□□□□ -0.25
SLIRP-210ENST00000557431 SEMA3AQ14563 771 aa13.52□□□□□ -0.25
SLIRP-210ENST00000557431 NKG7Q16617 165 aa13.52□□□□□ -0.25
SLIRP-210ENST00000557431 SLC5A12Q1EHB4 618 aa13.52□□□□□ -0.25
SLIRP-210ENST00000557431 PRAMEF13Q5VWM6 474 aa13.52□□□□□ -0.25
SLIRP-210ENST00000557431 FCRL6Q6DN72 434 aa13.52□□□□□ -0.25
SLIRP-210ENST00000557431 TLDC1Q6P9B6 456 aa13.52□□□□□ -0.25
SLIRP-210ENST00000557431 KIRREL2Q6UWL6 708 aa13.52□□□□□ -0.25
SLIRP-210ENST00000557431 LINC00696Q6ZRV3 163 aa13.52□□□□□ -0.25
SLIRP-210ENST00000557431 ARHGEF18Q6ZSZ5 1173 aa13.52□□□□□ -0.25
SLIRP-210ENST00000557431 LDB1Q86U70 411 aaPredicted RBP13.52□□□□□ -0.25
SLIRP-210ENST00000557431 TICAM1Q8IUC6 712 aa13.52□□□□□ -0.25
SLIRP-210ENST00000557431 CNGA4Q8IV77 575 aa13.52□□□□□ -0.25
SLIRP-210ENST00000557431 MCATQ8IVS2 390 aaKnown RBP13.52□□□□□ -0.25
SLIRP-210ENST00000557431 KLHDC8BQ8IXV7 354 aa13.52□□□□□ -0.25
SLIRP-210ENST00000557431 TC2NQ8N9U0 490 aa13.52□□□□□ -0.25
SLIRP-210ENST00000557431 FAM71DQ8N9W8 422 aa13.52□□□□□ -0.25
SLIRP-210ENST00000557431 CATSPER1Q8NEC5 780 aa13.52□□□□□ -0.25
SLIRP-210ENST00000557431 OR52K1Q8NGK4 314 aa13.52□□□□□ -0.25
SLIRP-210ENST00000557431 DNAJB14Q8TBM8 379 aa13.52□□□□□ -0.25
SLIRP-210ENST00000557431 STYXQ8WUJ0 223 aa13.52□□□□□ -0.25
SLIRP-210ENST00000557431 TM9SF4Q92544 642 aa13.52□□□□□ -0.25
SLIRP-210ENST00000557431 FERMT1Q9BQL6 677 aa13.52□□□□□ -0.25
SLIRP-210ENST00000557431 PCDHA3Q9Y5H8 950 aa13.52□□□□□ -0.25
SLIRP-210ENST00000557431 HS3ST3B1Q9Y662 390 aa13.52□□□□□ -0.25
SLIRP-210ENST00000557431 A0A1B0GX78 115 aa13.51□□□□□ -0.25
SLIRP-210ENST00000557431 IPO13O94829 963 aaKnown RBP13.51□□□□□ -0.25
SLIRP-210ENST00000557431 KLHL18O94889 574 aa13.51□□□□□ -0.25
SLIRP-210ENST00000557431 AP2A2O94973 939 aa13.51□□□□□ -0.25
SLIRP-210ENST00000557431 AP2A1O95782 977 aa13.51□□□□□ -0.25
SLIRP-210ENST00000557431 FTH1P02794 183 aa13.51□□□□□ -0.25
SLIRP-210ENST00000557431 MMP11P24347 488 aa13.51□□□□□ -0.25
SLIRP-210ENST00000557431 PSMB5P28074 263 aa13.51□□□□□ -0.25
SLIRP-210ENST00000557431 SOX8P57073 446 aa13.51□□□□□ -0.25
SLIRP-210ENST00000557431 CDC16Q13042 620 aa13.51□□□□□ -0.25
SLIRP-210ENST00000557431 GRB7Q14451 532 aa13.51□□□□□ -0.25
SLIRP-210ENST00000557431 FJX1Q86VR8 437 aa13.51□□□□□ -0.25
SLIRP-210ENST00000557431 TMTC1Q8IUR5 882 aa13.51□□□□□ -0.25
SLIRP-210ENST00000557431 KRT222Q8N1A0 295 aa13.51□□□□□ -0.25
SLIRP-210ENST00000557431 PPP4R1Q8TF05 950 aa13.51□□□□□ -0.25
SLIRP-210ENST00000557431 THOC3Q96J01 351 aaKnown RBP13.51□□□□□ -0.25
SLIRP-210ENST00000557431 MENTQ9BUN1 341 aa13.51□□□□□ -0.25
SLIRP-210ENST00000557431 UNKQ9C0B0 810 aaKnown RBP13.51□□□□□ -0.25
SLIRP-210ENST00000557431 AGPAT4Q9NRZ5 378 aa13.51□□□□□ -0.25
SLIRP-210ENST00000557431 CUTCQ9NTM9 273 aa13.51□□□□□ -0.25
SLIRP-210ENST00000557431 OR6C2Q9NZP2 312 aa13.51□□□□□ -0.25
SLIRP-210ENST00000557431 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.51□□□□□ -0.25
SLIRP-210ENST00000557431 TSR3Q9UJK0 312 aaKnown RBP13.51□□□□□ -0.25
SLIRP-210ENST00000557431 PACSIN2Q9UNF0 486 aaPredicted RBP13.51□□□□□ -0.25
SLIRP-210ENST00000557431 RUVBL2Q9Y230 463 aaKnown RBP13.51□□□□□ -0.25
SLIRP-210ENST00000557431 R3HDM2Q9Y2K5 976 aaKnown RBP13.51□□□□□ -0.25
SLIRP-210ENST00000557431 TCRBV7S2A1N4TA0A589 114 aa13.5□□□□□ -0.25
SLIRP-210ENST00000557431 FFAR3O14843 346 aa13.5□□□□□ -0.25
SLIRP-210ENST00000557431 GPR42O15529 346 aa13.5□□□□□ -0.25
SLIRP-210ENST00000557431 GOT2P00505 430 aaKnown RBP13.5□□□□□ -0.25
SLIRP-210ENST00000557431 F10P00742 488 aa13.5□□□□□ -0.25
SLIRP-210ENST00000557431 CCR7P32248 378 aa13.5□□□□□ -0.25
SLIRP-210ENST00000557431 GRIA1P42261 906 aa13.5□□□□□ -0.25
SLIRP-210ENST00000557431 BDKRB1P46663 353 aa13.5□□□□□ -0.25
SLIRP-210ENST00000557431 COPS2P61201 443 aa13.5□□□□□ -0.25
SLIRP-210ENST00000557431 YBX1P67809 324 aaKnown RBP13.5□□□□□ -0.25
SLIRP-210ENST00000557431 HSPA14Q0VDF9 509 aa13.5□□□□□ -0.25
SLIRP-210ENST00000557431 ITIH4Q14624 930 aa13.5□□□□□ -0.25
SLIRP-210ENST00000557431 ZNF169Q14929 603 aaPredicted RBP13.5□□□□□ -0.25
SLIRP-210ENST00000557431 KIR2DS3Q14952 304 aa13.5□□□□□ -0.25
SLIRP-210ENST00000557431 RBBP7Q16576 425 aa13.5□□□□□ -0.25
SLIRP-210ENST00000557431 TUBB8Q3ZCM7 444 aa13.5□□□□□ -0.25
SLIRP-210ENST00000557431 OVCH1Q7RTY7 1134 aa13.5□□□□□ -0.25
SLIRP-210ENST00000557431 PRUNE1Q86TP1 453 aa13.5□□□□□ -0.25
SLIRP-210ENST00000557431 MARVELD3Q96A59 401 aa13.5□□□□□ -0.25
SLIRP-210ENST00000557431 C8orf44Q96CB5 159 aa13.5□□□□□ -0.25
SLIRP-210ENST00000557431 ZNF778Q96MU6 729 aa13.5□□□□□ -0.25
SLIRP-210ENST00000557431 CHRNA10Q9GZZ6 450 aa13.5□□□□□ -0.25
SLIRP-210ENST00000557431 TSPY26PQ9H489 355 aa13.5□□□□□ -0.25
SLIRP-210ENST00000557431 LRRC40Q9H9A6 602 aa13.5□□□□□ -0.25
SLIRP-210ENST00000557431 POLG2Q9UHN1 485 aa13.5□□□□□ -0.25
SLIRP-210ENST00000557431 NCOA6Q14686 2063 aaPredicted RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms