RNA–Protein interactions for RNA: ENST00000557342.5

SLIRP-209, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-209ENST00000557342 FBXO15Q8NCQ5 510 aaPredicted RBP12.07□□□□□ -0.48
SLIRP-209ENST00000557342 NLGN4YQ8NFZ3 816 aaPredicted RBP12.07□□□□□ -0.48
SLIRP-209ENST00000557342 OR9A1PQ8NGU1 263 aa12.07□□□□□ -0.48
SLIRP-209ENST00000557342 GIMAP7Q8NHV1 300 aa12.07□□□□□ -0.48
SLIRP-209ENST00000557342 HMGCLL1Q8TB92 370 aa12.07□□□□□ -0.48
SLIRP-209ENST00000557342 SEC14L1Q92503 715 aa12.07□□□□□ -0.48
SLIRP-209ENST00000557342 NKD1Q969G9 470 aa12.07□□□□□ -0.48
SLIRP-209ENST00000557342 TCTN2Q96GX1 697 aa12.07□□□□□ -0.48
SLIRP-209ENST00000557342 PPM1MQ96MI6 270 aa12.07□□□□□ -0.48
SLIRP-209ENST00000557342 SLC30A3Q99726 388 aa12.07□□□□□ -0.48
SLIRP-209ENST00000557342 NRTNQ99748 197 aa12.07□□□□□ -0.48
SLIRP-209ENST00000557342 ULBP3Q9BZM4 244 aa12.07□□□□□ -0.48
SLIRP-209ENST00000557342 SPRY4Q9C004 299 aa12.07□□□□□ -0.48
SLIRP-209ENST00000557342 INTS7Q9NVH2 962 aaKnown RBP12.07□□□□□ -0.48
SLIRP-209ENST00000557342 SPHK1Q9NYA1 384 aa12.07□□□□□ -0.48
SLIRP-209ENST00000557342 PILRAQ9UKJ1 303 aa12.07□□□□□ -0.48
SLIRP-209ENST00000557342 USP24Q9UPU5 2620 aa12.07□□□□□ -0.48
SLIRP-209ENST00000557342 VWA7Q9Y334 891 aa12.07□□□□□ -0.48
SLIRP-209ENST00000557342 ANKRD12Q6UB98 2062 aa12.07□□□□□ -0.48
SLIRP-209ENST00000557342 FREM2Q5SZK8 3169 aa12.06□□□□□ -0.48
SLIRP-209ENST00000557342 KRT37O76014 449 aa12.06□□□□□ -0.48
SLIRP-209ENST00000557342 DLGAP3O95886 979 aa12.06□□□□□ -0.48
SLIRP-209ENST00000557342 MCM3P25205 808 aa12.06□□□□□ -0.48
SLIRP-209ENST00000557342 OAS2P29728 719 aaKnown RBP12.06□□□□□ -0.48
SLIRP-209ENST00000557342 SSTR1P30872 391 aa12.06□□□□□ -0.48
SLIRP-209ENST00000557342 MAGEA4P43358 317 aa12.06□□□□□ -0.48
SLIRP-209ENST00000557342 ARHGAP19Q14CB8 494 aa12.06□□□□□ -0.48
SLIRP-209ENST00000557342 TGIF1Q15583 401 aa12.06□□□□□ -0.48
SLIRP-209ENST00000557342 RBM20Q5T481 1227 aaKnown RBP12.06□□□□□ -0.48
SLIRP-209ENST00000557342 HECTD2Q5U5R9 776 aa12.06□□□□□ -0.48
SLIRP-209ENST00000557342 CYHR1Q6ZMK1 362 aa12.06□□□□□ -0.48
SLIRP-209ENST00000557342 CCDC81Q6ZN84 652 aa12.06□□□□□ -0.48
SLIRP-209ENST00000557342 CAPN12Q6ZSI9 719 aa12.06□□□□□ -0.48
SLIRP-209ENST00000557342 C3orf62Q6ZUJ4 267 aa12.06□□□□□ -0.48
SLIRP-209ENST00000557342 STRA8Q7Z7C7 330 aa12.06□□□□□ -0.48
SLIRP-209ENST00000557342 CCDC25Q86WR0 208 aa12.06□□□□□ -0.48
SLIRP-209ENST00000557342 CPNE9Q8IYJ1 553 aa12.06□□□□□ -0.48
SLIRP-209ENST00000557342 ESX1Q8N693 406 aa12.06□□□□□ -0.48
SLIRP-209ENST00000557342 C19orf47Q8N9M1 422 aaKnown RBP12.06□□□□□ -0.48
SLIRP-209ENST00000557342 LINC01555Q8NAE3 123 aa12.06□□□□□ -0.48
SLIRP-209ENST00000557342 FLVCR1-AS1Q8TAF5 88 aa12.06□□□□□ -0.48
SLIRP-209ENST00000557342 ASB11Q8WXH4 323 aa12.06□□□□□ -0.48
SLIRP-209ENST00000557342 ZNF501Q96CX3 271 aaPredicted RBP12.06□□□□□ -0.48
SLIRP-209ENST00000557342 ELMO2Q96JJ3 720 aa12.06□□□□□ -0.48
SLIRP-209ENST00000557342 IL17FQ96PD4 163 aa12.06□□□□□ -0.48
SLIRP-209ENST00000557342 EFHD1Q9BUP0 239 aa12.06□□□□□ -0.48
SLIRP-209ENST00000557342 CHRNA10Q9GZZ6 450 aa12.06□□□□□ -0.48
SLIRP-209ENST00000557342 TSPYL1Q9H0U9 437 aa12.06□□□□□ -0.48
SLIRP-209ENST00000557342 PRORYQ9H606 182 aa12.06□□□□□ -0.48
SLIRP-209ENST00000557342 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.06□□□□□ -0.48
SLIRP-209ENST00000557342 TXNDC16Q9P2K2 825 aa12.06□□□□□ -0.48
SLIRP-209ENST00000557342 SLC17A6Q9P2U8 582 aa12.06□□□□□ -0.48
SLIRP-209ENST00000557342 MTRF1LQ9UGC7 380 aaKnown RBP12.06□□□□□ -0.48
SLIRP-209ENST00000557342 CIDEBQ9UHD4 219 aa12.06□□□□□ -0.48
SLIRP-209ENST00000557342 LHX6Q9UPM6 363 aa12.06□□□□□ -0.48
SLIRP-209ENST00000557342 RUVBL2Q9Y230 463 aaKnown RBP12.06□□□□□ -0.48
SLIRP-209ENST00000557342 KMT2BQ9UMN6 2715 aaPredicted RBP12.05□□□□□ -0.48
SLIRP-209ENST00000557342 ESYT3A0FGR9 886 aa12.05□□□□□ -0.48
SLIRP-209ENST00000557342 ARHGEF33A8MVX0 844 aa12.05□□□□□ -0.48
SLIRP-209ENST00000557342 GFYI3L273 518 aa12.05□□□□□ -0.48
SLIRP-209ENST00000557342 MYO1CO00159 1063 aa12.05□□□□□ -0.48
SLIRP-209ENST00000557342 KIAA0754O94854 1291 aa12.05□□□□□ -0.48
SLIRP-209ENST00000557342 C8GP07360 202 aa12.05□□□□□ -0.48
SLIRP-209ENST00000557342 PVRP15151 417 aa12.05□□□□□ -0.48
SLIRP-209ENST00000557342 FDXRP22570 491 aa12.05□□□□□ -0.48
SLIRP-209ENST00000557342 PEBP1P30086 187 aaKnown RBP12.05□□□□□ -0.48
SLIRP-209ENST00000557342 STX2P32856 288 aa12.05□□□□□ -0.48
SLIRP-209ENST00000557342 CDKN2DP55273 166 aa12.05□□□□□ -0.48
SLIRP-209ENST00000557342 IL2P60568 153 aa12.05□□□□□ -0.48
SLIRP-209ENST00000557342 CXADRP78310 365 aa12.05□□□□□ -0.48
SLIRP-209ENST00000557342 VAC14Q08AM6 782 aa12.05□□□□□ -0.48
SLIRP-209ENST00000557342 ABHD18Q0P651 414 aa12.05□□□□□ -0.48
SLIRP-209ENST00000557342 NAA25Q14CX7 972 aa12.05□□□□□ -0.48
SLIRP-209ENST00000557342 TRADDQ15628 312 aa12.05□□□□□ -0.48
SLIRP-209ENST00000557342 SF1Q15637 639 aaKnown RBP12.05□□□□□ -0.48
SLIRP-209ENST00000557342 GPR19Q15760 415 aa12.05□□□□□ -0.48
SLIRP-209ENST00000557342 CYP2A13Q16696 494 aa12.05□□□□□ -0.48
SLIRP-209ENST00000557342 CCSMST1Q4G0I0 132 aa12.05□□□□□ -0.48
SLIRP-209ENST00000557342 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.05□□□□□ -0.48
SLIRP-209ENST00000557342 PAQR3Q6TCH7 311 aa12.05□□□□□ -0.48
SLIRP-209ENST00000557342 C6orf15Q6UXA7 325 aaPredicted RBP12.05□□□□□ -0.48
SLIRP-209ENST00000557342 GPR155Q7Z3F1 870 aa12.05□□□□□ -0.48
SLIRP-209ENST00000557342 ZC3HC1Q86WB0 502 aaKnown RBP12.05□□□□□ -0.48
SLIRP-209ENST00000557342 MYO1HQ8N1T3 1032 aa12.05□□□□□ -0.48
SLIRP-209ENST00000557342 C2orf73Q8N5S3 287 aaPredicted RBP12.05□□□□□ -0.48
SLIRP-209ENST00000557342 ZSCAN1Q8NBB4 408 aa12.05□□□□□ -0.48
SLIRP-209ENST00000557342 NOA1Q8NC60 698 aaKnown RBP12.05□□□□□ -0.48
SLIRP-209ENST00000557342 N4BP2L2Q92802 583 aaPredicted RBP12.05□□□□□ -0.48
SLIRP-209ENST00000557342 KIAA1143Q96AT1 154 aaPredicted RBP12.05□□□□□ -0.48
SLIRP-209ENST00000557342 SERTAD3Q9UJW9 196 aa12.05□□□□□ -0.48
SLIRP-209ENST00000557342 DMXL2Q8TDJ6 3036 aa12.05□□□□□ -0.48
SLIRP-209ENST00000557342 FAM95CA0A1B0GW59 222 aa12.04□□□□□ -0.48
SLIRP-209ENST00000557342 TCRBV9S1A1TA0A576 114 aa12.04□□□□□ -0.48
SLIRP-209ENST00000557342 TMEM150CB9EJG8 249 aa12.04□□□□□ -0.48
SLIRP-209ENST00000557342 K7ENP7 123 aa12.04□□□□□ -0.48
SLIRP-209ENST00000557342 SLC16A5O15375 505 aa12.04□□□□□ -0.48
SLIRP-209ENST00000557342 SYF2O95926 243 aaKnown RBP12.04□□□□□ -0.48
SLIRP-209ENST00000557342 CCNYL3P0C7X3 344 aa12.04□□□□□ -0.48
SLIRP-209ENST00000557342 ERGP11308 486 aa12.04□□□□□ -0.48
SLIRP-209ENST00000557342 ZNF28P17035 718 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms