RNA–Protein interactions for RNA: ENST00000556548.5

SDR39U1-220, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 2,336 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-220ENST00000556548 DNAJB14Q8TBM8 379 aa17.82■□□□□ 0.44
SDR39U1-220ENST00000556548 USP7Q93009 1102 aa17.82■□□□□ 0.44
SDR39U1-220ENST00000556548 ACPTQ9BZG2 426 aa17.82■□□□□ 0.44
SDR39U1-220ENST00000556548 MKRN2Q9H000 416 aaKnown RBP17.82■□□□□ 0.44
SDR39U1-220ENST00000556548 MBNL1Q9NR56 388 aaKnown RBP17.82■□□□□ 0.44
SDR39U1-220ENST00000556548 H3BNX3 289 aa17.81■□□□□ 0.44
SDR39U1-220ENST00000556548 PAK4O96013 591 aaPredicted RBP17.81■□□□□ 0.44
SDR39U1-220ENST00000556548 KRT6AP02538 564 aa17.81■□□□□ 0.44
SDR39U1-220ENST00000556548 KRT6BP04259 564 aa17.81■□□□□ 0.44
SDR39U1-220ENST00000556548 KRT6CP48668 564 aa17.81■□□□□ 0.44
SDR39U1-220ENST00000556548 CAMK2GQ13555 558 aaPredicted RBP17.81■□□□□ 0.44
SDR39U1-220ENST00000556548 WSCD2Q2TBF2 565 aa17.81■□□□□ 0.44
SDR39U1-220ENST00000556548 ZNF658BQ4V348 819 aaPredicted RBP17.81■□□□□ 0.44
SDR39U1-220ENST00000556548 TRIM46Q7Z4K8 759 aa17.81■□□□□ 0.44
SDR39U1-220ENST00000556548 SPATA24Q86W54 205 aa17.81■□□□□ 0.44
SDR39U1-220ENST00000556548 CLHC1Q8NHS4 586 aa17.81■□□□□ 0.44
SDR39U1-220ENST00000556548 LRRC58Q96CX6 371 aa17.81■□□□□ 0.44
SDR39U1-220ENST00000556548 YIPF3Q9GZM5 350 aa17.81■□□□□ 0.44
SDR39U1-220ENST00000556548 EPHX3Q9H6B9 360 aa17.81■□□□□ 0.44
SDR39U1-220ENST00000556548 LRTM1Q9HBL6 345 aa17.81■□□□□ 0.44
SDR39U1-220ENST00000556548 TM7SF3Q9NS93 570 aa17.81■□□□□ 0.44
SDR39U1-220ENST00000556548 ZIM2Q9NZV7 527 aa17.81■□□□□ 0.44
SDR39U1-220ENST00000556548 OR1A2Q9Y585 309 aa17.81■□□□□ 0.44
SDR39U1-220ENST00000556548 TNRC18O15417 2968 aaPredicted RBP17.81■□□□□ 0.44
SDR39U1-220ENST00000556548 ZFC3H1O60293 1989 aaKnown RBP17.81■□□□□ 0.44
SDR39U1-220ENST00000556548 KCNE1BA0A087WTH5 132 aa17.81■□□□□ 0.44
SDR39U1-220ENST00000556548 E7EQ34 232 aa17.81■□□□□ 0.44
SDR39U1-220ENST00000556548 FXYD1O00168 92 aa17.81■□□□□ 0.44
SDR39U1-220ENST00000556548 SOX11P35716 441 aa17.81■□□□□ 0.44
SDR39U1-220ENST00000556548 GNPDA1P46926 289 aa17.81■□□□□ 0.44
SDR39U1-220ENST00000556548 ENPP2Q13822 863 aa17.81■□□□□ 0.44
SDR39U1-220ENST00000556548 SLC2A7Q6PXP3 512 aa17.81■□□□□ 0.44
SDR39U1-220ENST00000556548 XKR5Q6UX68 686 aa17.81■□□□□ 0.44
SDR39U1-220ENST00000556548 CYP2R1Q6VVX0 501 aa17.81■□□□□ 0.44
SDR39U1-220ENST00000556548 HACD2Q6Y1H2 254 aa17.81■□□□□ 0.44
SDR39U1-220ENST00000556548 FAM83HQ6ZRV2 1179 aaPredicted RBP17.81■□□□□ 0.44
SDR39U1-220ENST00000556548 LIX1Q8N485 282 aa17.81■□□□□ 0.44
SDR39U1-220ENST00000556548 CCDC138Q96M89 665 aa17.81■□□□□ 0.44
SDR39U1-220ENST00000556548 GPATCH1Q9BRR8 931 aaKnown RBP17.81■□□□□ 0.44
SDR39U1-220ENST00000556548 SLC29A3Q9BZD2 475 aa17.81■□□□□ 0.44
SDR39U1-220ENST00000556548 OSBPL6Q9BZF3 934 aa17.81■□□□□ 0.44
SDR39U1-220ENST00000556548 PRM3Q9NNZ6 103 aa17.81■□□□□ 0.44
SDR39U1-220ENST00000556548 FAM234BA2RU67 622 aa17.8■□□□□ 0.44
SDR39U1-220ENST00000556548 NME4O00746 187 aa17.8■□□□□ 0.44
SDR39U1-220ENST00000556548 NPC1O15118 1278 aa17.8■□□□□ 0.44
SDR39U1-220ENST00000556548 BCAS2O75934 225 aaPredicted RBP17.8■□□□□ 0.44
SDR39U1-220ENST00000556548 IMPA1P29218 277 aa17.8■□□□□ 0.44
SDR39U1-220ENST00000556548 MTHFRP42898 656 aa17.8■□□□□ 0.44
SDR39U1-220ENST00000556548 IRF8Q02556 426 aa17.8■□□□□ 0.44
SDR39U1-220ENST00000556548 GRIK2Q13002 908 aa17.8■□□□□ 0.44
SDR39U1-220ENST00000556548 PRKG2Q13237 762 aa17.8■□□□□ 0.44
SDR39U1-220ENST00000556548 BLMHQ13867 455 aa17.8■□□□□ 0.44
SDR39U1-220ENST00000556548 TRIM25Q14258 630 aaKnown RBP17.8■□□□□ 0.44
SDR39U1-220ENST00000556548 MAP7D1Q3KQU3 841 aa17.8■□□□□ 0.44
SDR39U1-220ENST00000556548 XKR6Q5GH73 641 aa17.8■□□□□ 0.44
SDR39U1-220ENST00000556548 KBTBD2Q8IY47 623 aa17.8■□□□□ 0.44
SDR39U1-220ENST00000556548 CD300AQ9UGN4 299 aa17.8■□□□□ 0.44
SDR39U1-220ENST00000556548 EIF3LQ9Y262 564 aaKnown RBP17.8■□□□□ 0.44
SDR39U1-220ENST00000556548 BRWD1Q9NSI6 2320 aa17.8■□□□□ 0.44
SDR39U1-220ENST00000556548 F5P12259 2224 aa17.8■□□□□ 0.44
SDR39U1-220ENST00000556548 H3BQ06 376 aaPredicted RBP17.8■□□□□ 0.44
SDR39U1-220ENST00000556548 C1orf105O95561 183 aa17.8■□□□□ 0.44
SDR39U1-220ENST00000556548 EGFP01133 1207 aa17.8■□□□□ 0.44
SDR39U1-220ENST00000556548 CD22P20273 847 aa17.8■□□□□ 0.44
SDR39U1-220ENST00000556548 RPS14P62263 151 aaKnown RBP17.8■□□□□ 0.44
SDR39U1-220ENST00000556548 HTR4Q13639 388 aa17.8■□□□□ 0.44
SDR39U1-220ENST00000556548 INPP5AQ14642 412 aa17.8■□□□□ 0.44
SDR39U1-220ENST00000556548 PON2Q15165 354 aa17.8■□□□□ 0.44
SDR39U1-220ENST00000556548 LPCAT4Q643R3 524 aa17.8■□□□□ 0.44
SDR39U1-220ENST00000556548 DHDDSQ86SQ9 333 aa17.8■□□□□ 0.44
SDR39U1-220ENST00000556548 ZFAND4Q86XD8 727 aa17.8■□□□□ 0.44
SDR39U1-220ENST00000556548 DNAJC9Q8WXX5 260 aa17.8■□□□□ 0.44
SDR39U1-220ENST00000556548 ASB9Q96DX5 294 aa17.8■□□□□ 0.44
SDR39U1-220ENST00000556548 OR4K3Q96R72 315 aa17.8■□□□□ 0.44
SDR39U1-220ENST00000556548 GID8Q9NWU2 228 aa17.8■□□□□ 0.44
SDR39U1-220ENST00000556548 SLC23A2Q9UGH3 650 aa17.8■□□□□ 0.44
SDR39U1-220ENST00000556548 SNX6Q9UNH7 406 aa17.8■□□□□ 0.44
SDR39U1-220ENST00000556548 PSMD13Q9UNM6 376 aa17.8■□□□□ 0.44
SDR39U1-220ENST00000556548 DNAH14Q0VDD8 3507 aa17.79■□□□□ 0.44
SDR39U1-220ENST00000556548 ANKRD28O15084 1053 aa17.79■□□□□ 0.44
SDR39U1-220ENST00000556548 C5AR1P21730 350 aa17.79■□□□□ 0.44
SDR39U1-220ENST00000556548 CDK3Q00526 305 aa17.79■□□□□ 0.44
SDR39U1-220ENST00000556548 DDX39BQ13838 428 aaKnown RBP17.79■□□□□ 0.44
SDR39U1-220ENST00000556548 TLR1Q15399 786 aa17.79■□□□□ 0.44
SDR39U1-220ENST00000556548 RABL3Q5HYI8 236 aa17.79■□□□□ 0.44
SDR39U1-220ENST00000556548 TMEM196Q5HYL7 178 aa17.79■□□□□ 0.44
SDR39U1-220ENST00000556548 SAMD4BQ5PRF9 694 aaKnown RBP17.79■□□□□ 0.44
SDR39U1-220ENST00000556548 TTC23LQ6PF05 361 aa17.79■□□□□ 0.44
SDR39U1-220ENST00000556548 SUSD1Q6UWL2 747 aa17.79■□□□□ 0.44
SDR39U1-220ENST00000556548 MTSS1LQ765P7 747 aa17.79■□□□□ 0.44
SDR39U1-220ENST00000556548 SLC15A3Q8IY34 581 aa17.79■□□□□ 0.44
SDR39U1-220ENST00000556548 KRTCAP2Q8N6L1 136 aa17.79■□□□□ 0.44
SDR39U1-220ENST00000556548 HOPXQ9BPY8 73 aaPredicted RBP17.79■□□□□ 0.44
SDR39U1-220ENST00000556548 CMTM6Q9NX76 183 aa17.79■□□□□ 0.44
SDR39U1-220ENST00000556548 FBXL12Q9NXK8 326 aa17.79■□□□□ 0.44
SDR39U1-220ENST00000556548 ZFR2Q9UPR6 939 aaKnown RBP17.79■□□□□ 0.44
SDR39U1-220ENST00000556548 LRRC42Q9Y546 428 aa17.79■□□□□ 0.44
SDR39U1-220ENST00000556548 TRIOO75962 3097 aa17.79■□□□□ 0.44
SDR39U1-220ENST00000556548 A6NHS1 94 aa17.78■□□□□ 0.44
SDR39U1-220ENST00000556548 SH3BGRLO75368 114 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms