RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 MAZP56270 477 aaKnown RBP2.9□□□□□ -1.95
SNX6-204ENST00000555541 ARF3P61204 181 aaPredicted RBP2.9□□□□□ -1.95
SNX6-204ENST00000555541 ARF1P84077 181 aaKnown RBP2.9□□□□□ -1.95
SNX6-204ENST00000555541 SQLEQ14534 574 aa2.9□□□□□ -1.95
SNX6-204ENST00000555541 XKR3Q5GH77 459 aa2.9□□□□□ -1.95
SNX6-204ENST00000555541 SLC25A53Q5H9E4 307 aa2.9□□□□□ -1.95
SNX6-204ENST00000555541 RAB41Q5JT25 222 aa2.9□□□□□ -1.95
SNX6-204ENST00000555541 SPDYCQ5MJ68 293 aa2.9□□□□□ -1.95
SNX6-204ENST00000555541 CCDC30Q5VVM6 783 aa2.9□□□□□ -1.95
SNX6-204ENST00000555541 DHRS7BQ6IAN0 325 aaPredicted RBP2.9□□□□□ -1.95
SNX6-204ENST00000555541 BTN2A1Q7KYR7 527 aa2.9□□□□□ -1.95
SNX6-204ENST00000555541 CEP57Q86XR8 500 aa2.9□□□□□ -1.95
SNX6-204ENST00000555541 ZNF584Q8IVC4 421 aa2.9□□□□□ -1.95
SNX6-204ENST00000555541 GOLGA6L2Q8N9W4 650 aaPredicted RBP2.9□□□□□ -1.95
SNX6-204ENST00000555541 C1orf131Q8NDD1 294 aaKnown RBP2.9□□□□□ -1.95
SNX6-204ENST00000555541 CCDC107Q8WV48 283 aa2.9□□□□□ -1.95
SNX6-204ENST00000555541 CENPTQ96BT3 561 aa2.9□□□□□ -1.95
SNX6-204ENST00000555541 SAT2Q96F10 170 aaPredicted RBP2.9□□□□□ -1.95
SNX6-204ENST00000555541 RAB11FIP5Q9BXF6 653 aa2.9□□□□□ -1.95
SNX6-204ENST00000555541 PANK4Q9NVE7 773 aa2.9□□□□□ -1.95
SNX6-204ENST00000555541 NUDT4Q9NZJ9 180 aa2.9□□□□□ -1.95
SNX6-204ENST00000555541 DAPK2Q9UIK4 370 aa2.9□□□□□ -1.95
SNX6-204ENST00000555541 ANKUB1A6NFN9 424 aa2.89□□□□□ -1.95
SNX6-204ENST00000555541 KLLNB2CW77 178 aa2.89□□□□□ -1.95
SNX6-204ENST00000555541 VILLO15195 856 aa2.89□□□□□ -1.95
SNX6-204ENST00000555541 MAGEC1O60732 1142 aa2.89□□□□□ -1.95
SNX6-204ENST00000555541 ZWINTO95229 277 aa2.89□□□□□ -1.95
SNX6-204ENST00000555541 VTNP04004 478 aa2.89□□□□□ -1.95
SNX6-204ENST00000555541 RBMS1P29558 406 aaKnown RBP2.89□□□□□ -1.95
SNX6-204ENST00000555541 CDC25CP30307 473 aa2.89□□□□□ -1.95
SNX6-204ENST00000555541 MS4A2Q01362 244 aa2.89□□□□□ -1.95
SNX6-204ENST00000555541 TNIP1Q15025 636 aa2.89□□□□□ -1.95
SNX6-204ENST00000555541 ELFN2Q5R3F8 820 aa2.89□□□□□ -1.95
SNX6-204ENST00000555541 KRT79Q5XKE5 535 aa2.89□□□□□ -1.95
SNX6-204ENST00000555541 SLC25A47Q6Q0C1 308 aa2.89□□□□□ -1.95
SNX6-204ENST00000555541 RTN4RL2Q86UN3 420 aa2.89□□□□□ -1.95
SNX6-204ENST00000555541 EID3Q8N140 333 aa2.89□□□□□ -1.95
SNX6-204ENST00000555541 FBXO39Q8N4B4 442 aa2.89□□□□□ -1.95
SNX6-204ENST00000555541 OR11H4Q8NGC9 324 aa2.89□□□□□ -1.95
SNX6-204ENST00000555541 VANGL1Q8TAA9 524 aaPredicted RBP2.89□□□□□ -1.95
SNX6-204ENST00000555541 MPP4Q96JB8 637 aa2.89□□□□□ -1.95
SNX6-204ENST00000555541 C10orf90Q96M02 699 aa2.89□□□□□ -1.95
SNX6-204ENST00000555541 RAD9AQ99638 391 aa2.89□□□□□ -1.95
SNX6-204ENST00000555541 OR2B2Q9GZK3 357 aa2.89□□□□□ -1.95
SNX6-204ENST00000555541 SHARPINQ9H0F6 387 aa2.89□□□□□ -1.95
SNX6-204ENST00000555541 SPHK2Q9NRA0 654 aa2.89□□□□□ -1.95
SNX6-204ENST00000555541 SERINC1Q9NRX5 453 aa2.89□□□□□ -1.95
SNX6-204ENST00000555541 MAN2C1Q9NTJ4 1040 aa2.89□□□□□ -1.95
SNX6-204ENST00000555541 ARHGEF38Q9NXL2 777 aa2.89□□□□□ -1.95
SNX6-204ENST00000555541 OR6C2Q9NZP2 312 aa2.89□□□□□ -1.95
SNX6-204ENST00000555541 THEGQ9P2T0 379 aa2.89□□□□□ -1.95
SNX6-204ENST00000555541 PPP2R2CQ9Y2T4 447 aa2.89□□□□□ -1.95
SNX6-204ENST00000555541 COL16A1Q07092 1604 aaPredicted RBP2.89□□□□□ -1.95
SNX6-204ENST00000555541 IGLV3-10A0A075B6K4 115 aa2.88□□□□□ -1.95
SNX6-204ENST00000555541 FEZF1A0PJY2 475 aa2.88□□□□□ -1.95
SNX6-204ENST00000555541 OR2A25A4D2G3 310 aa2.88□□□□□ -1.95
SNX6-204ENST00000555541 MPTX1A8MV57 137 aa2.88□□□□□ -1.95
SNX6-204ENST00000555541 B4DLN1 442 aa2.88□□□□□ -1.95
SNX6-204ENST00000555541 IDH3BO43837 385 aa2.88□□□□□ -1.95
SNX6-204ENST00000555541 GLRA3O75311 464 aa2.88□□□□□ -1.95
SNX6-204ENST00000555541 SEC24AO95486 1093 aa2.88□□□□□ -1.95
SNX6-204ENST00000555541 OR2T7P0C7T2 308 aa2.88□□□□□ -1.95
SNX6-204ENST00000555541 HSPA8P11142 646 aaKnown RBP2.88□□□□□ -1.95
SNX6-204ENST00000555541 MRPL12P52815 198 aaKnown RBP2.88□□□□□ -1.95
SNX6-204ENST00000555541 CYCSP99999 105 aaKnown RBP2.88□□□□□ -1.95
SNX6-204ENST00000555541 CALCOCO2Q13137 446 aa2.88□□□□□ -1.95
SNX6-204ENST00000555541 FASTKD3Q14CZ7 662 aaKnown RBP2.88□□□□□ -1.95
SNX6-204ENST00000555541 FAM180BQ6P0A1 224 aa2.88□□□□□ -1.95
SNX6-204ENST00000555541 TMEM207Q6UWW9 146 aa2.88□□□□□ -1.95
SNX6-204ENST00000555541 ADIPOR2Q86V24 386 aa2.88□□□□□ -1.95
SNX6-204ENST00000555541 AFAP1Q8N556 730 aa2.88□□□□□ -1.95
SNX6-204ENST00000555541 PAFAH2Q99487 392 aa2.88□□□□□ -1.95
SNX6-204ENST00000555541 URM1Q9BTM9 101 aaKnown RBP2.88□□□□□ -1.95
SNX6-204ENST00000555541 THAP2Q9H0W7 228 aa2.88□□□□□ -1.95
SNX6-204ENST00000555541 PSD3Q9NYI0 1048 aa2.88□□□□□ -1.95
SNX6-204ENST00000555541 SUCLA2Q9P2R7 463 aaPredicted RBP2.88□□□□□ -1.95
SNX6-204ENST00000555541 WBP11Q9Y2W2 641 aaKnown RBP2.88□□□□□ -1.95
SNX6-204ENST00000555541 LAS1LQ9Y4W2 734 aaKnown RBP2.88□□□□□ -1.95
SNX6-204ENST00000555541 PCDH11YQ9BZA8 1340 aa2.88□□□□□ -1.95
SNX6-204ENST00000555541 TMEM221A6NGB7 291 aa2.87□□□□□ -1.95
SNX6-204ENST00000555541 AGAP14A8MT82 685 aa2.87□□□□□ -1.95
SNX6-204ENST00000555541 AP3D1O14617 1153 aa2.87□□□□□ -1.95
SNX6-204ENST00000555541 TSPAN1O60635 241 aa2.87□□□□□ -1.95
SNX6-204ENST00000555541 AVILO75366 819 aa2.87□□□□□ -1.95
SNX6-204ENST00000555541 CDK2AP2O75956 126 aa2.87□□□□□ -1.95
SNX6-204ENST00000555541 C22orf31O95567 290 aa2.87□□□□□ -1.95
SNX6-204ENST00000555541 CDH3P22223 829 aa2.87□□□□□ -1.95
SNX6-204ENST00000555541 PRKACGP22612 351 aa2.87□□□□□ -1.95
SNX6-204ENST00000555541 RPL21P46778 160 aaKnown RBP2.87□□□□□ -1.95
SNX6-204ENST00000555541 SLC9A3P48764 834 aa2.87□□□□□ -1.95
SNX6-204ENST00000555541 TAF10Q12962 218 aa2.87□□□□□ -1.95
SNX6-204ENST00000555541 DDX10Q13206 875 aaKnown RBP2.87□□□□□ -1.95
SNX6-204ENST00000555541 LY6DQ14210 128 aa2.87□□□□□ -1.95
SNX6-204ENST00000555541 HERC3Q15034 1050 aa2.87□□□□□ -1.95
SNX6-204ENST00000555541 ODF4Q2M2E3 257 aa2.87□□□□□ -1.95
SNX6-204ENST00000555541 MOGAT2Q3SYC2 334 aa2.87□□□□□ -1.95
SNX6-204ENST00000555541 PLEKHS1Q5SXH7 462 aa2.87□□□□□ -1.95
SNX6-204ENST00000555541 LYSMD4Q5XG99 296 aa2.87□□□□□ -1.95
SNX6-204ENST00000555541 TEX38Q6PEX7 206 aa2.87□□□□□ -1.95
SNX6-204ENST00000555541 TBC1D1Q86TI0 1168 aaPredicted RBP2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms