RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 GPR89AB7ZAQ6 455 aa8.65□□□□□ -1.02
TDP1-210ENST00000554976 PDLIM1O00151 329 aa8.65□□□□□ -1.02
TDP1-210ENST00000554976 KLF8O95600 359 aaPredicted RBP8.65□□□□□ -1.02
TDP1-210ENST00000554976 CHEK2O96017 543 aa8.65□□□□□ -1.02
TDP1-210ENST00000554976 PCCBP05166 539 aa8.65□□□□□ -1.02
TDP1-210ENST00000554976 GPR89BP0CG08 455 aa8.65□□□□□ -1.02
TDP1-210ENST00000554976 JUPP14923 745 aa8.65□□□□□ -1.02
TDP1-210ENST00000554976 MS4A2Q01362 244 aa8.65□□□□□ -1.02
TDP1-210ENST00000554976 ABRQ12979 859 aa8.65□□□□□ -1.02
TDP1-210ENST00000554976 RPA4Q13156 261 aa8.65□□□□□ -1.02
TDP1-210ENST00000554976 STX5Q13190 355 aa8.65□□□□□ -1.02
TDP1-210ENST00000554976 SMAD4Q13485 552 aaKnown RBP8.65□□□□□ -1.02
TDP1-210ENST00000554976 NFE2L1Q14494 772 aa8.65□□□□□ -1.02
TDP1-210ENST00000554976 ZRSR2Q15696 482 aaKnown RBP8.65□□□□□ -1.02
TDP1-210ENST00000554976 AGTRAPQ6RW13 159 aa8.65□□□□□ -1.02
TDP1-210ENST00000554976 TMEM92Q6UXU6 159 aa8.65□□□□□ -1.02
TDP1-210ENST00000554976 UNC5DQ6UXZ4 953 aa8.65□□□□□ -1.02
TDP1-210ENST00000554976 USP30Q70CQ3 517 aa8.65□□□□□ -1.02
TDP1-210ENST00000554976 PDZD3Q86UT5 571 aa8.65□□□□□ -1.02
TDP1-210ENST00000554976 THOC6Q86W42 341 aaKnown RBP8.65□□□□□ -1.02
TDP1-210ENST00000554976 MINDY1Q8N5J2 469 aa8.65□□□□□ -1.02
TDP1-210ENST00000554976 FAM81AQ8TBF8 368 aa8.65□□□□□ -1.02
TDP1-210ENST00000554976 MCOLN3Q8TDD5 553 aa8.65□□□□□ -1.02
TDP1-210ENST00000554976 ZFAND2BQ8WV99 257 aa8.65□□□□□ -1.02
TDP1-210ENST00000554976 TMEM159Q96B96 161 aa8.65□□□□□ -1.02
TDP1-210ENST00000554976 DNAJC11Q9NVH1 559 aa8.65□□□□□ -1.02
TDP1-210ENST00000554976 RIC8BQ9NVN3 520 aa8.65□□□□□ -1.02
TDP1-210ENST00000554976 NDE1Q9NXR1 346 aa8.65□□□□□ -1.02
TDP1-210ENST00000554976 STX18Q9P2W9 335 aaKnown RBP8.65□□□□□ -1.02
TDP1-210ENST00000554976 SLC17A4Q9Y2C5 497 aa8.65□□□□□ -1.02
TDP1-210ENST00000554976 SLC28A1O00337 649 aa8.64□□□□□ -1.03
TDP1-210ENST00000554976 SOX1O00570 391 aaPredicted RBP8.64□□□□□ -1.03
TDP1-210ENST00000554976 NARSO43776 548 aaKnown RBP8.64□□□□□ -1.03
TDP1-210ENST00000554976 LMNAP02545 664 aaKnown RBP8.64□□□□□ -1.03
TDP1-210ENST00000554976 HOXC4P09017 264 aaPredicted RBP8.64□□□□□ -1.03
TDP1-210ENST00000554976 GLULP15104 373 aa8.64□□□□□ -1.03
TDP1-210ENST00000554976 MXRA7P84157 204 aa8.64□□□□□ -1.03
TDP1-210ENST00000554976 ZNF33BQ06732 778 aa8.64□□□□□ -1.03
TDP1-210ENST00000554976 FXNQ16595 210 aa8.64□□□□□ -1.03
TDP1-210ENST00000554976 MAP7D1Q3KQU3 841 aa8.64□□□□□ -1.03
TDP1-210ENST00000554976 SYTL3Q4VX76 610 aa8.64□□□□□ -1.03
TDP1-210ENST00000554976 THEMIS2Q5TEJ8 643 aa8.64□□□□□ -1.03
TDP1-210ENST00000554976 LIPJQ5W064 366 aa8.64□□□□□ -1.03
TDP1-210ENST00000554976 METRNLQ641Q3 311 aa8.64□□□□□ -1.03
TDP1-210ENST00000554976 SUSD1Q6UWL2 747 aa8.64□□□□□ -1.03
TDP1-210ENST00000554976 BNC2Q6ZN30 1099 aaPredicted RBP8.64□□□□□ -1.03
TDP1-210ENST00000554976 RGL4Q8IZJ4 473 aa8.64□□□□□ -1.03
TDP1-210ENST00000554976 ZNF480Q8WV37 535 aa8.64□□□□□ -1.03
TDP1-210ENST00000554976 PYCR2Q96C36 320 aa8.64□□□□□ -1.03
TDP1-210ENST00000554976 CHRDQ9H2X0 955 aa8.64□□□□□ -1.03
TDP1-210ENST00000554976 PREBQ9HCU5 417 aa8.64□□□□□ -1.03
TDP1-210ENST00000554976 SLC2A4RGQ9NR83 387 aa8.64□□□□□ -1.03
TDP1-210ENST00000554976 TM7SF3Q9NS93 570 aa8.64□□□□□ -1.03
TDP1-210ENST00000554976 SPATA6Q9NWH7 488 aaPredicted RBP8.64□□□□□ -1.03
TDP1-210ENST00000554976 GPRC5BQ9NZH0 403 aa8.64□□□□□ -1.03
TDP1-210ENST00000554976 SCML1Q9UN30 329 aa8.64□□□□□ -1.03
TDP1-210ENST00000554976 PCDHA9Q9Y5H5 950 aa8.64□□□□□ -1.03
TDP1-210ENST00000554976 TP53BP1Q12888 1972 aaPredicted RBP8.64□□□□□ -1.03
TDP1-210ENST00000554976 A0A1W2PP18 115 aa8.64□□□□□ -1.03
TDP1-210ENST00000554976 E7ENX8 843 aa8.64□□□□□ -1.03
TDP1-210ENST00000554976 E7EQ34 232 aa8.64□□□□□ -1.03
TDP1-210ENST00000554976 H0YIV9 168 aa8.64□□□□□ -1.03
TDP1-210ENST00000554976 RNASEH1O60930 286 aaKnown RBP8.64□□□□□ -1.03
TDP1-210ENST00000554976 POP7O75817 140 aaKnown RBP8.64□□□□□ -1.03
TDP1-210ENST00000554976 SLC16A8O95907 504 aa8.64□□□□□ -1.03
TDP1-210ENST00000554976 CAPNS1P04632 268 aa8.64□□□□□ -1.03
TDP1-210ENST00000554976 G6PDP11413 515 aa8.64□□□□□ -1.03
TDP1-210ENST00000554976 MYCLP1P12525 358 aaPredicted RBP8.64□□□□□ -1.03
TDP1-210ENST00000554976 XRCC1P18887 633 aaPredicted RBP8.64□□□□□ -1.03
TDP1-210ENST00000554976 RGS19P49795 217 aa8.64□□□□□ -1.03
TDP1-210ENST00000554976 PSME3P61289 254 aa8.64□□□□□ -1.03
TDP1-210ENST00000554976 PPP2CBP62714 309 aa8.64□□□□□ -1.03
TDP1-210ENST00000554976 RPS21P63220 83 aaKnown RBP8.64□□□□□ -1.03
TDP1-210ENST00000554976 PPP2CAP67775 309 aa8.64□□□□□ -1.03
TDP1-210ENST00000554976 FOXM1Q08050 763 aa8.64□□□□□ -1.03
TDP1-210ENST00000554976 INPP5AQ14642 412 aa8.64□□□□□ -1.03
TDP1-210ENST00000554976 ATP6AP1LQ52LC2 224 aa8.64□□□□□ -1.03
TDP1-210ENST00000554976 GRHL2Q6ISB3 625 aa8.64□□□□□ -1.03
TDP1-210ENST00000554976 AAGABQ6PD74 315 aa8.64□□□□□ -1.03
TDP1-210ENST00000554976 DPP10Q8N608 796 aa8.64□□□□□ -1.03
TDP1-210ENST00000554976 DUS3LQ96G46 650 aaKnown RBP8.64□□□□□ -1.03
TDP1-210ENST00000554976 MAGEB10Q96LZ2 347 aaPredicted RBP8.64□□□□□ -1.03
TDP1-210ENST00000554976 TMEM74Q96NL1 305 aa8.64□□□□□ -1.03
TDP1-210ENST00000554976 C1orf50Q9BV19 199 aa8.64□□□□□ -1.03
TDP1-210ENST00000554976 TRIM54Q9BYV2 358 aa8.64□□□□□ -1.03
TDP1-210ENST00000554976 SUCOQ9UBS9 1254 aaKnown RBP8.64□□□□□ -1.03
TDP1-210ENST00000554976 ZNF490Q9ULM2 529 aaPredicted RBP8.64□□□□□ -1.03
TDP1-210ENST00000554976 EML5Q05BV3 1969 aa8.64□□□□□ -1.03
TDP1-210ENST00000554976 FAM234BA2RU67 622 aa8.64□□□□□ -1.03
TDP1-210ENST00000554976 H3BM21 787 aa8.64□□□□□ -1.03
TDP1-210ENST00000554976 H3BQ06 376 aaPredicted RBP8.64□□□□□ -1.03
TDP1-210ENST00000554976 MRASO14807 208 aa8.64□□□□□ -1.03
TDP1-210ENST00000554976 RNGTTO60942 597 aaKnown RBP8.64□□□□□ -1.03
TDP1-210ENST00000554976 IGLV3-19P01714 112 aa8.64□□□□□ -1.03
TDP1-210ENST00000554976 CEACAM5P06731 702 aa8.64□□□□□ -1.03
TDP1-210ENST00000554976 HIST1H2AGP0C0S8 130 aaPredicted RBP8.64□□□□□ -1.03
TDP1-210ENST00000554976 HOXB2P14652 356 aa8.64□□□□□ -1.03
TDP1-210ENST00000554976 HIST1H2ADP20671 130 aa8.64□□□□□ -1.03
TDP1-210ENST00000554976 C21orf58P58505 322 aa8.64□□□□□ -1.03
TDP1-210ENST00000554976 PLOD1Q02809 727 aaPredicted RBP8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms