RNA–Protein interactions for RNA: ENST00000553950.5

SHMT2-210, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-210ENST00000553950 CCNDBP1O95273 360 aa14.08□□□□□ -0.16
SHMT2-210ENST00000553950 FKBP9O95302 570 aa14.08□□□□□ -0.16
SHMT2-210ENST00000553950 SLC16A8O95907 504 aa14.08□□□□□ -0.16
SHMT2-210ENST00000553950 EEF1DP29692 281 aaKnown RBP14.08□□□□□ -0.16
SHMT2-210ENST00000553950 SLC19A1P41440 591 aa14.08□□□□□ -0.16
SHMT2-210ENST00000553950 EPHA4P54764 986 aa14.08□□□□□ -0.16
SHMT2-210ENST00000553950 SLC14A1Q13336 389 aa14.08□□□□□ -0.16
SHMT2-210ENST00000553950 SHBQ15464 509 aa14.08□□□□□ -0.16
SHMT2-210ENST00000553950 CHI3L2Q15782 390 aa14.08□□□□□ -0.16
SHMT2-210ENST00000553950 CYP2A13Q16696 494 aa14.08□□□□□ -0.16
SHMT2-210ENST00000553950 ZNF678Q5SXM1 525 aa14.08□□□□□ -0.16
SHMT2-210ENST00000553950 AGTRAPQ6RW13 159 aa14.08□□□□□ -0.16
SHMT2-210ENST00000553950 KANSL1Q7Z3B3 1105 aa14.08□□□□□ -0.16
SHMT2-210ENST00000553950 C17orf82Q86X59 251 aaPredicted RBP14.08□□□□□ -0.16
SHMT2-210ENST00000553950 FAM181AQ8N9Y4 354 aa14.08□□□□□ -0.16
SHMT2-210ENST00000553950 GPR156Q8NFN8 814 aa14.08□□□□□ -0.16
SHMT2-210ENST00000553950 OR52E1Q8NGJ3 308 aa14.08□□□□□ -0.16
SHMT2-210ENST00000553950 OR2L8Q8NGY9 312 aa14.08□□□□□ -0.16
SHMT2-210ENST00000553950 CKAP2Q8WWK9 683 aa14.08□□□□□ -0.16
SHMT2-210ENST00000553950 LCN9Q8WX39 176 aa14.08□□□□□ -0.16
SHMT2-210ENST00000553950 SMPDL3AQ92484 453 aa14.08□□□□□ -0.16
SHMT2-210ENST00000553950 NAT6Q93015 286 aa14.08□□□□□ -0.16
SHMT2-210ENST00000553950 SLC22A18Q96BI1 424 aa14.08□□□□□ -0.16
SHMT2-210ENST00000553950 TMEM237Q96Q45 408 aa14.08□□□□□ -0.16
SHMT2-210ENST00000553950 MECRQ9BV79 373 aa14.08□□□□□ -0.16
SHMT2-210ENST00000553950 CAPS2Q9BXY5 557 aa14.08□□□□□ -0.16
SHMT2-210ENST00000553950 CD244Q9BZW8 370 aa14.08□□□□□ -0.16
SHMT2-210ENST00000553950 C12orf65Q9H3J6 166 aaKnown RBP14.08□□□□□ -0.16
SHMT2-210ENST00000553950 SLC40A1Q9NP59 571 aa14.08□□□□□ -0.16
SHMT2-210ENST00000553950 UCKL1Q9NWZ5 548 aa14.08□□□□□ -0.16
SHMT2-210ENST00000553950 GPRC5BQ9NZH0 403 aa14.08□□□□□ -0.16
SHMT2-210ENST00000553950 SCHIP1Q9P0W5 487 aaPredicted RBP14.08□□□□□ -0.16
SHMT2-210ENST00000553950 ZNF624Q9P2J8 865 aaPredicted RBP14.08□□□□□ -0.16
SHMT2-210ENST00000553950 ANGPTL3Q9Y5C1 460 aa14.08□□□□□ -0.16
SHMT2-210ENST00000553950 NUDT21O43809 227 aaKnown RBP14.07□□□□□ -0.16
SHMT2-210ENST00000553950 NOBOXO60393 691 aa14.07□□□□□ -0.16
SHMT2-210ENST00000553950 EML2O95834 649 aa14.07□□□□□ -0.16
SHMT2-210ENST00000553950 GRK6P43250 576 aa14.07□□□□□ -0.16
SHMT2-210ENST00000553950 SLC6A12P48065 614 aa14.07□□□□□ -0.16
SHMT2-210ENST00000553950 KCNC1P48547 511 aa14.07□□□□□ -0.16
SHMT2-210ENST00000553950 TBPL1P62380 186 aa14.07□□□□□ -0.16
SHMT2-210ENST00000553950 GALNT1Q10472 559 aaPredicted RBP14.07□□□□□ -0.16
SHMT2-210ENST00000553950 RCN2Q14257 317 aa14.07□□□□□ -0.16
SHMT2-210ENST00000553950 NR0B2Q15466 257 aa14.07□□□□□ -0.16
SHMT2-210ENST00000553950 CSRP2Q16527 193 aa14.07□□□□□ -0.16
SHMT2-210ENST00000553950 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.07□□□□□ -0.16
SHMT2-210ENST00000553950 TMEM26Q6ZUK4 368 aa14.07□□□□□ -0.16
SHMT2-210ENST00000553950 FRMD7Q6ZUT3 714 aa14.07□□□□□ -0.16
SHMT2-210ENST00000553950 AMIGO1Q86WK6 493 aa14.07□□□□□ -0.16
SHMT2-210ENST00000553950 CHCHD4Q8N4Q1 142 aa14.07□□□□□ -0.16
SHMT2-210ENST00000553950 AFAP1L2Q8N4X5 818 aa14.07□□□□□ -0.16
SHMT2-210ENST00000553950 KYQ8NBH2 561 aa14.07□□□□□ -0.16
SHMT2-210ENST00000553950 OR56A3Q8NH54 315 aa14.07□□□□□ -0.16
SHMT2-210ENST00000553950 ZNF480Q8WV37 535 aa14.07□□□□□ -0.16
SHMT2-210ENST00000553950 MED8Q96G25 268 aa14.07□□□□□ -0.16
SHMT2-210ENST00000553950 CNDP1Q96KN2 507 aa14.07□□□□□ -0.16
SHMT2-210ENST00000553950 MIPEPQ99797 713 aa14.07□□□□□ -0.16
SHMT2-210ENST00000553950 TMEM79Q9BSE2 394 aa14.07□□□□□ -0.16
SHMT2-210ENST00000553950 HAUS8Q9BT25 410 aa14.07□□□□□ -0.16
SHMT2-210ENST00000553950 SLC32A1Q9H598 525 aa14.07□□□□□ -0.16
SHMT2-210ENST00000553950 MANSC1Q9H8J5 431 aa14.07□□□□□ -0.16
SHMT2-210ENST00000553950 DNAJC11Q9NVH1 559 aa14.07□□□□□ -0.16
SHMT2-210ENST00000553950 ENTPD2Q9Y5L3 495 aa14.07□□□□□ -0.16
SHMT2-210ENST00000553950 GOLGA4Q13439 2230 aaKnown RBP14.06□□□□□ -0.16
SHMT2-210ENST00000553950 WDR91A4D1P6 747 aa14.06□□□□□ -0.16
SHMT2-210ENST00000553950 RHPN2P1A8MT19 583 aa14.06□□□□□ -0.16
SHMT2-210ENST00000553950 POLR3GO15318 223 aaPredicted RBP14.06□□□□□ -0.16
SHMT2-210ENST00000553950 CCNT2O60583 730 aaKnown RBP14.06□□□□□ -0.16
SHMT2-210ENST00000553950 SUPT7LO94864 414 aa14.06□□□□□ -0.16
SHMT2-210ENST00000553950 WDR47O94967 919 aa14.06□□□□□ -0.16
SHMT2-210ENST00000553950 FGF3P11487 239 aaPredicted RBP14.06□□□□□ -0.16
SHMT2-210ENST00000553950 PNLIPP16233 465 aa14.06□□□□□ -0.16
SHMT2-210ENST00000553950 EPB42P16452 691 aa14.06□□□□□ -0.16
SHMT2-210ENST00000553950 GPR3P46089 330 aa14.06□□□□□ -0.16
SHMT2-210ENST00000553950 HSPA7P48741 367 aa14.06□□□□□ -0.16
SHMT2-210ENST00000553950 DUSP3P51452 185 aaPredicted RBP14.06□□□□□ -0.16
SHMT2-210ENST00000553950 HK2P52789 917 aa14.06□□□□□ -0.16
SHMT2-210ENST00000553950 NAGLUP54802 743 aa14.06□□□□□ -0.16
SHMT2-210ENST00000553950 BNIP3Q12983 259 aa14.06□□□□□ -0.16
SHMT2-210ENST00000553950 LCP2Q13094 533 aa14.06□□□□□ -0.16
SHMT2-210ENST00000553950 PRKAA1Q13131 559 aa14.06□□□□□ -0.16
SHMT2-210ENST00000553950 PRKG2Q13237 762 aa14.06□□□□□ -0.16
SHMT2-210ENST00000553950 STX3Q13277 289 aa14.06□□□□□ -0.16
SHMT2-210ENST00000553950 GPR18Q14330 331 aa14.06□□□□□ -0.16
SHMT2-210ENST00000553950 GRB7Q14451 532 aa14.06□□□□□ -0.16
SHMT2-210ENST00000553950 PTCHD3Q3KNS1 767 aa14.06□□□□□ -0.16
SHMT2-210ENST00000553950 PRAMEF14Q5SWL7 426 aa14.06□□□□□ -0.16
SHMT2-210ENST00000553950 PRAMEF13Q5VWM6 474 aa14.06□□□□□ -0.16
SHMT2-210ENST00000553950 MBOAT1Q6ZNC8 495 aa14.06□□□□□ -0.16
SHMT2-210ENST00000553950 OOSP2Q86WS3 158 aa14.06□□□□□ -0.16
SHMT2-210ENST00000553950 SLC25A45Q8N413 288 aa14.06□□□□□ -0.16
SHMT2-210ENST00000553950 ARL14Q8N4G2 192 aa14.06□□□□□ -0.16
SHMT2-210ENST00000553950 CCNYL1Q8N7R7 359 aa14.06□□□□□ -0.16
SHMT2-210ENST00000553950 ZNF483Q8TF39 744 aaPredicted RBP14.06□□□□□ -0.16
SHMT2-210ENST00000553950 SETD7Q8WTS6 366 aaKnown RBP14.06□□□□□ -0.16
SHMT2-210ENST00000553950 SLC38A3Q99624 504 aa14.06□□□□□ -0.16
SHMT2-210ENST00000553950 EDEM2Q9BV94 578 aa14.06□□□□□ -0.16
SHMT2-210ENST00000553950 SGPP1Q9BX95 441 aa14.06□□□□□ -0.16
SHMT2-210ENST00000553950 NSRP1Q9H0G5 558 aaKnown RBP14.06□□□□□ -0.16
SHMT2-210ENST00000553950 SRMSQ9H3Y6 488 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms