RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 AMIGO1Q86WK6 493 aa8.1□□□□□ -1.11
PSEN1-209ENST00000553855 KMT5CQ86Y97 462 aa8.1□□□□□ -1.11
PSEN1-209ENST00000553855 TRIM42Q8IWZ5 723 aa8.1□□□□□ -1.11
PSEN1-209ENST00000553855 CTAGE4Q8IX94 777 aa8.1□□□□□ -1.11
PSEN1-209ENST00000553855 ZBED8Q8IZ13 594 aa8.1□□□□□ -1.11
PSEN1-209ENST00000553855 SLC22A15Q8IZD6 547 aa8.1□□□□□ -1.11
PSEN1-209ENST00000553855 CARFQ8N187 725 aa8.1□□□□□ -1.11
PSEN1-209ENST00000553855 KRT222Q8N1A0 295 aa8.1□□□□□ -1.11
PSEN1-209ENST00000553855 ZBTB2Q8N680 514 aa8.1□□□□□ -1.11
PSEN1-209ENST00000553855 CEP112Q8N8E3 955 aa8.1□□□□□ -1.11
PSEN1-209ENST00000553855 SIDT2Q8NBJ9 832 aaKnown RBP8.1□□□□□ -1.11
PSEN1-209ENST00000553855 OR4E2Q8NGC2 313 aa8.1□□□□□ -1.11
PSEN1-209ENST00000553855 OR52E1Q8NGJ3 308 aa8.1□□□□□ -1.11
PSEN1-209ENST00000553855 OR5K2Q8NHB8 316 aa8.1□□□□□ -1.11
PSEN1-209ENST00000553855 PYROXD1Q8WU10 500 aa8.1□□□□□ -1.11
PSEN1-209ENST00000553855 JPH3Q8WXH2 748 aaPredicted RBP8.1□□□□□ -1.11
PSEN1-209ENST00000553855 LPGAT1Q92604 370 aa8.1□□□□□ -1.11
PSEN1-209ENST00000553855 RSC1A1Q92681 617 aa8.1□□□□□ -1.11
PSEN1-209ENST00000553855 N4BP2L2Q92802 583 aaPredicted RBP8.1□□□□□ -1.11
PSEN1-209ENST00000553855 USP7Q93009 1102 aa8.1□□□□□ -1.11
PSEN1-209ENST00000553855 ART4Q93070 314 aa8.1□□□□□ -1.11
PSEN1-209ENST00000553855 NKD1Q969G9 470 aa8.1□□□□□ -1.11
PSEN1-209ENST00000553855 CERS2Q96G23 380 aa8.1□□□□□ -1.11
PSEN1-209ENST00000553855 PRR11Q96HE9 360 aaPredicted RBP8.1□□□□□ -1.11
PSEN1-209ENST00000553855 NAF1Q96HR8 494 aaKnown RBP8.1□□□□□ -1.11
PSEN1-209ENST00000553855 FCRL3Q96P31 734 aaPredicted RBP8.1□□□□□ -1.11
PSEN1-209ENST00000553855 RAB11FIP5Q9BXF6 653 aa8.1□□□□□ -1.11
PSEN1-209ENST00000553855 DPH1Q9BZG8 443 aa8.1□□□□□ -1.11
PSEN1-209ENST00000553855 B3GNT4Q9C0J1 378 aa8.1□□□□□ -1.11
PSEN1-209ENST00000553855 P2RY12Q9H244 342 aa8.1□□□□□ -1.11
PSEN1-209ENST00000553855 TFB2MQ9H5Q4 396 aaKnown RBP8.1□□□□□ -1.11
PSEN1-209ENST00000553855 FANCEQ9HB96 536 aa8.1□□□□□ -1.11
PSEN1-209ENST00000553855 PDE7BQ9NP56 450 aa8.1□□□□□ -1.11
PSEN1-209ENST00000553855 FBXO6Q9NRD1 293 aaPredicted RBP8.1□□□□□ -1.11
PSEN1-209ENST00000553855 FAM114A2Q9NRY5 505 aa8.1□□□□□ -1.11
PSEN1-209ENST00000553855 SOHLH2Q9NX45 425 aa8.1□□□□□ -1.11
PSEN1-209ENST00000553855 DNAJB12Q9NXW2 375 aaKnown RBP8.1□□□□□ -1.11
PSEN1-209ENST00000553855 NSMCE4AQ9NXX6 385 aa8.1□□□□□ -1.11
PSEN1-209ENST00000553855 TMEM9Q9P0T7 183 aa8.1□□□□□ -1.11
PSEN1-209ENST00000553855 PDP2Q9P2J9 529 aa8.1□□□□□ -1.11
PSEN1-209ENST00000553855 TXNDC16Q9P2K2 825 aa8.1□□□□□ -1.11
PSEN1-209ENST00000553855 ACACBO00763 2458 aa8.1□□□□□ -1.11
PSEN1-209ENST00000553855 ANKRD11Q6UB99 2663 aaPredicted RBP8.1□□□□□ -1.11
PSEN1-209ENST00000553855 PRAMEF33A0A0G2JMD5 474 aa8.09□□□□□ -1.11
PSEN1-209ENST00000553855 PIPSLA2A3N6 862 aa8.09□□□□□ -1.11
PSEN1-209ENST00000553855 TLCD2A6NGC4 264 aa8.09□□□□□ -1.11
PSEN1-209ENST00000553855 SRRM3A6NNA2 597 aaPredicted RBP8.09□□□□□ -1.11
PSEN1-209ENST00000553855 ZNF839A8K0R7 811 aa8.09□□□□□ -1.11
PSEN1-209ENST00000553855 STMND1H3BQB6 276 aa8.09□□□□□ -1.11
PSEN1-209ENST00000553855 CASC3O15234 703 aaKnown RBP8.09□□□□□ -1.11
PSEN1-209ENST00000553855 EIF3HO15372 352 aaKnown RBP eCLIP8.09□□□□□ -1.11
PSEN1-209ENST00000553855 KLK10O43240 276 aa8.09□□□□□ -1.11
PSEN1-209ENST00000553855 GPC4O75487 556 aa8.09□□□□□ -1.11
PSEN1-209ENST00000553855 ZBTB11O95625 1053 aaPredicted RBP8.09□□□□□ -1.11
PSEN1-209ENST00000553855 C9P02748 559 aa8.09□□□□□ -1.11
PSEN1-209ENST00000553855 CATP04040 527 aaKnown RBP8.09□□□□□ -1.11
PSEN1-209ENST00000553855 CCL4P13236 92 aa8.09□□□□□ -1.11
PSEN1-209ENST00000553855 ITIH1P19827 911 aa8.09□□□□□ -1.11
PSEN1-209ENST00000553855 IVDP26440 423 aa8.09□□□□□ -1.11
PSEN1-209ENST00000553855 ARNTP27540 789 aa8.09□□□□□ -1.11
PSEN1-209ENST00000553855 MAP4P27816 1152 aaKnown RBP8.09□□□□□ -1.11
PSEN1-209ENST00000553855 SLC5A2P31639 672 aa8.09□□□□□ -1.11
PSEN1-209ENST00000553855 EIF2S3P41091 472 aaKnown RBP8.09□□□□□ -1.11
PSEN1-209ENST00000553855 SKIV2L2P42285 1042 aaKnown RBP8.09□□□□□ -1.11
PSEN1-209ENST00000553855 SLC1A2P43004 574 aa8.09□□□□□ -1.11
PSEN1-209ENST00000553855 RPL21P46778 160 aaKnown RBP8.09□□□□□ -1.11
PSEN1-209ENST00000553855 CARSP49589 748 aaKnown RBP8.09□□□□□ -1.11
PSEN1-209ENST00000553855 PLTPP55058 493 aa8.09□□□□□ -1.11
PSEN1-209ENST00000553855 MC2RQ01718 297 aa8.09□□□□□ -1.11
PSEN1-209ENST00000553855 CTBP1Q13363 440 aa8.09□□□□□ -1.11
PSEN1-209ENST00000553855 HP1BP3Q5SSJ5 553 aaPredicted RBP8.09□□□□□ -1.11
PSEN1-209ENST00000553855 NAPRTQ6XQN6 538 aa8.09□□□□□ -1.11
PSEN1-209ENST00000553855 TMPRSS9Q7Z410 1059 aa8.09□□□□□ -1.11
PSEN1-209ENST00000553855 PRSS42Q7Z5A4 293 aa8.09□□□□□ -1.11
PSEN1-209ENST00000553855 CLEC14AQ86T13 490 aa8.09□□□□□ -1.11
PSEN1-209ENST00000553855 CCDC25Q86WR0 208 aa8.09□□□□□ -1.11
PSEN1-209ENST00000553855 RASGRP3Q8IV61 690 aa8.09□□□□□ -1.11
PSEN1-209ENST00000553855 DCUN1D3Q8IWE4 304 aa8.09□□□□□ -1.11
PSEN1-209ENST00000553855 DENND6AQ8IWF6 608 aa8.09□□□□□ -1.11
PSEN1-209ENST00000553855 FBXO36Q8NEA4 188 aa8.09□□□□□ -1.11
PSEN1-209ENST00000553855 OR5AR1Q8NGP9 310 aa8.09□□□□□ -1.11
PSEN1-209ENST00000553855 KCNJ9Q92806 393 aa8.09□□□□□ -1.11
PSEN1-209ENST00000553855 RAD51AP1Q96B01 352 aa8.09□□□□□ -1.11
PSEN1-209ENST00000553855 SLC22A18Q96BI1 424 aa8.09□□□□□ -1.11
PSEN1-209ENST00000553855 DDA1Q9BW61 102 aa8.09□□□□□ -1.11
PSEN1-209ENST00000553855 TSPYL1Q9H0U9 437 aa8.09□□□□□ -1.11
PSEN1-209ENST00000553855 ZNF768Q9H5H4 540 aaKnown RBP8.09□□□□□ -1.11
PSEN1-209ENST00000553855 SAYSD1Q9NPB0 183 aa8.09□□□□□ -1.11
PSEN1-209ENST00000553855 ASCL3Q9NQ33 180 aa8.09□□□□□ -1.11
PSEN1-209ENST00000553855 FBXO8Q9NRD0 319 aa8.09□□□□□ -1.11
PSEN1-209ENST00000553855 TAS2R13Q9NYV9 303 aa8.09□□□□□ -1.11
PSEN1-209ENST00000553855 IL1RAPL1Q9NZN1 696 aa8.09□□□□□ -1.11
PSEN1-209ENST00000553855 OR6C2Q9NZP2 312 aa8.09□□□□□ -1.11
PSEN1-209ENST00000553855 MTRF1LQ9UGC7 380 aaKnown RBP8.09□□□□□ -1.11
PSEN1-209ENST00000553855 LNPEPQ9UIQ6 1025 aa8.09□□□□□ -1.11
PSEN1-209ENST00000553855 TRMT6Q9UJA5 497 aaKnown RBP8.09□□□□□ -1.11
PSEN1-209ENST00000553855 ZNF106Q9H2Y7 1883 aaKnown RBP8.09□□□□□ -1.12
PSEN1-209ENST00000553855 CDRT15L2A8MXV6 281 aa8.08□□□□□ -1.12
PSEN1-209ENST00000553855 ISM1B1AKI9 464 aa8.08□□□□□ -1.12
PSEN1-209ENST00000553855 FANCGO15287 622 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms