RNA–Protein interactions for RNA: ENST00000553619.1

VTI1B-202, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-202ENST00000553619 HIST1H2ADP20671 130 aa4.91□□□□□ -1.62
VTI1B-202ENST00000553619 ALDH3A1P30838 453 aa4.91□□□□□ -1.62
VTI1B-202ENST00000553619 ACSL1P33121 698 aa4.91□□□□□ -1.62
VTI1B-202ENST00000553619 CNR2P34972 360 aa4.91□□□□□ -1.62
VTI1B-202ENST00000553619 RPA3P35244 121 aaPredicted RBP4.91□□□□□ -1.62
VTI1B-202ENST00000553619 DPP6P42658 865 aa4.91□□□□□ -1.62
VTI1B-202ENST00000553619 RABIFP47224 123 aa4.91□□□□□ -1.62
VTI1B-202ENST00000553619 BLKP51451 505 aa4.91□□□□□ -1.62
VTI1B-202ENST00000553619 THOP1P52888 689 aa4.91□□□□□ -1.62
VTI1B-202ENST00000553619 KIAA1024LP59773 190 aa4.91□□□□□ -1.62
VTI1B-202ENST00000553619 OVGP1Q12889 678 aa4.91□□□□□ -1.62
VTI1B-202ENST00000553619 MTAPQ13126 283 aa4.91□□□□□ -1.62
VTI1B-202ENST00000553619 PDE1CQ14123 709 aaPredicted RBP4.91□□□□□ -1.62
VTI1B-202ENST00000553619 CSHL1Q14406 222 aa4.91□□□□□ -1.62
VTI1B-202ENST00000553619 SMAD1Q15797 465 aaKnown RBP4.91□□□□□ -1.62
VTI1B-202ENST00000553619 BCL7AQ4VC05 210 aa4.91□□□□□ -1.62
VTI1B-202ENST00000553619 ANKRD39Q53RE8 183 aa4.91□□□□□ -1.62
VTI1B-202ENST00000553619 ZNF789Q5FWF6 425 aa4.91□□□□□ -1.62
VTI1B-202ENST00000553619 CDKL4Q5MAI5 379 aa4.91□□□□□ -1.62
VTI1B-202ENST00000553619 WDR45BQ5MNZ6 344 aa4.91□□□□□ -1.62
VTI1B-202ENST00000553619 RBM20Q5T481 1227 aaKnown RBP4.91□□□□□ -1.62
VTI1B-202ENST00000553619 N4BP2L1Q5TBK1 243 aaPredicted RBP4.91□□□□□ -1.62
VTI1B-202ENST00000553619 BICRALQ6AI39 1079 aa4.91□□□□□ -1.62
VTI1B-202ENST00000553619 ZNF549Q6P9A3 640 aa4.91□□□□□ -1.62
VTI1B-202ENST00000553619 TTC23LQ6PF05 361 aa4.91□□□□□ -1.62
VTI1B-202ENST00000553619 CCDC81Q6ZN84 652 aa4.91□□□□□ -1.62
VTI1B-202ENST00000553619 Q6ZS52 159 aa4.91□□□□□ -1.62
VTI1B-202ENST00000553619 NEK10Q6ZWH5 1172 aa4.91□□□□□ -1.62
VTI1B-202ENST00000553619 CMC1Q7Z7K0 106 aa4.91□□□□□ -1.62
VTI1B-202ENST00000553619 ADGRG6Q86SQ4 1221 aa4.91□□□□□ -1.62
VTI1B-202ENST00000553619 LRRTM4Q86VH4 590 aa4.91□□□□□ -1.62
VTI1B-202ENST00000553619 LSRQ86X29 649 aaPredicted RBP4.91□□□□□ -1.62
VTI1B-202ENST00000553619 CACUL1Q86Y37 369 aa4.91□□□□□ -1.62
VTI1B-202ENST00000553619 NUDCD3Q8IVD9 361 aa4.91□□□□□ -1.62
VTI1B-202ENST00000553619 KIRREL3Q8IZU9 778 aa4.91□□□□□ -1.62
VTI1B-202ENST00000553619 ZBTB2Q8N680 514 aa4.91□□□□□ -1.62
VTI1B-202ENST00000553619 TP53I13Q8NBR0 393 aaPredicted RBP4.91□□□□□ -1.62
VTI1B-202ENST00000553619 RAB3IL1Q8TBN0 382 aa4.91□□□□□ -1.62
VTI1B-202ENST00000553619 MAGEC3Q8TD91 643 aa4.91□□□□□ -1.62
VTI1B-202ENST00000553619 MCOLN3Q8TDD5 553 aa4.91□□□□□ -1.62
VTI1B-202ENST00000553619 DENND1AQ8TEH3 1009 aa4.91□□□□□ -1.62
VTI1B-202ENST00000553619 ELMO1Q92556 727 aa4.91□□□□□ -1.62
VTI1B-202ENST00000553619 KIAA1191Q96A73 305 aa4.91□□□□□ -1.62
VTI1B-202ENST00000553619 ZBTB9Q96C00 473 aa4.91□□□□□ -1.62
VTI1B-202ENST00000553619 NXNL1Q96CM4 212 aa4.91□□□□□ -1.62
VTI1B-202ENST00000553619 SGF29Q96ES7 293 aa4.91□□□□□ -1.62
VTI1B-202ENST00000553619 TOE1Q96GM8 510 aaKnown RBP4.91□□□□□ -1.62
VTI1B-202ENST00000553619 HIST1H2AHQ96KK5 128 aa4.91□□□□□ -1.62
VTI1B-202ENST00000553619 UBXN10Q96LJ8 280 aa4.91□□□□□ -1.62
VTI1B-202ENST00000553619 LINC00615Q96LM1 132 aaPredicted RBP4.91□□□□□ -1.62
VTI1B-202ENST00000553619 MAGEB18Q96M61 343 aa4.91□□□□□ -1.62
VTI1B-202ENST00000553619 FAM111AQ96PZ2 611 aa4.91□□□□□ -1.62
VTI1B-202ENST00000553619 UHRF1Q96T88 793 aaPredicted RBP4.91□□□□□ -1.62
VTI1B-202ENST00000553619 NDNQ99608 321 aa4.91□□□□□ -1.62
VTI1B-202ENST00000553619 KLF6Q99612 283 aaPredicted RBP4.91□□□□□ -1.62
VTI1B-202ENST00000553619 GPR21Q99679 349 aa4.91□□□□□ -1.62
VTI1B-202ENST00000553619 HIST1H2AJQ99878 128 aa4.91□□□□□ -1.62
VTI1B-202ENST00000553619 H2AFJQ9BTM1 129 aa4.91□□□□□ -1.62
VTI1B-202ENST00000553619 GPR174Q9BXC1 333 aa4.91□□□□□ -1.62
VTI1B-202ENST00000553619 TEX101Q9BY14 249 aa4.91□□□□□ -1.62
VTI1B-202ENST00000553619 DERL2Q9GZP9 239 aa4.91□□□□□ -1.62
VTI1B-202ENST00000553619 MRPL46Q9H2W6 279 aaKnown RBP4.91□□□□□ -1.62
VTI1B-202ENST00000553619 WDR26Q9H7D7 661 aa4.91□□□□□ -1.62
VTI1B-202ENST00000553619 MANSC1Q9H8J5 431 aa4.91□□□□□ -1.62
VTI1B-202ENST00000553619 CAB39LQ9H9S4 337 aa4.91□□□□□ -1.62
VTI1B-202ENST00000553619 SARS2Q9NP81 518 aaKnown RBP4.91□□□□□ -1.62
VTI1B-202ENST00000553619 SPATA6Q9NWH7 488 aaPredicted RBP4.91□□□□□ -1.62
VTI1B-202ENST00000553619 KLHL14Q9P2G3 628 aa4.91□□□□□ -1.62
VTI1B-202ENST00000553619 SERGEFQ9UGK8 458 aa4.91□□□□□ -1.62
VTI1B-202ENST00000553619 ACSL6Q9UKU0 697 aa4.91□□□□□ -1.62
VTI1B-202ENST00000553619 PLXNB3Q9ULL4 1909 aa4.91□□□□□ -1.62
VTI1B-202ENST00000553619 DOCK9Q9BZ29 2069 aa4.9□□□□□ -1.62
VTI1B-202ENST00000553619 PLXNA2O75051 1894 aa4.9□□□□□ -1.62
VTI1B-202ENST00000553619 IGHV1OR15-9A0A0B4J2B8 117 aa4.9□□□□□ -1.63
VTI1B-202ENST00000553619 A0A1W2PPC4 97 aa4.9□□□□□ -1.63
VTI1B-202ENST00000553619 MGAT4DA6NG13 374 aa4.9□□□□□ -1.63
VTI1B-202ENST00000553619 TMEM221A6NGB7 291 aa4.9□□□□□ -1.63
VTI1B-202ENST00000553619 OR2AG2A6NM03 316 aa4.9□□□□□ -1.63
VTI1B-202ENST00000553619 PRR5-ARHGAP8B1AHC4 643 aa4.9□□□□□ -1.63
VTI1B-202ENST00000553619 M0R296 226 aa4.9□□□□□ -1.63
VTI1B-202ENST00000553619 IFRD1O00458 451 aaPredicted RBP4.9□□□□□ -1.63
VTI1B-202ENST00000553619 CHUKO15111 745 aa4.9□□□□□ -1.63
VTI1B-202ENST00000553619 RAD51BO15315 384 aa4.9□□□□□ -1.63
VTI1B-202ENST00000553619 PHGDHO43175 533 aaKnown RBP4.9□□□□□ -1.63
VTI1B-202ENST00000553619 GRID2O43424 1007 aa4.9□□□□□ -1.63
VTI1B-202ENST00000553619 LATO43561 262 aa4.9□□□□□ -1.63
VTI1B-202ENST00000553619 PLIN3O60664 434 aa4.9□□□□□ -1.63
VTI1B-202ENST00000553619 SNX2O60749 519 aa4.9□□□□□ -1.63
VTI1B-202ENST00000553619 NIPSNAP2O75323 286 aa4.9□□□□□ -1.63
VTI1B-202ENST00000553619 PPM1BO75688 479 aa4.9□□□□□ -1.63
VTI1B-202ENST00000553619 POP7O75817 140 aaKnown RBP4.9□□□□□ -1.63
VTI1B-202ENST00000553619 FSBPO95073 299 aa4.9□□□□□ -1.63
VTI1B-202ENST00000553619 TNFP01375 233 aa4.9□□□□□ -1.63
VTI1B-202ENST00000553619 RPN2P04844 631 aa4.9□□□□□ -1.63
VTI1B-202ENST00000553619 C8GP07360 202 aa4.9□□□□□ -1.63
VTI1B-202ENST00000553619 DCNP07585 359 aaKnown RBP4.9□□□□□ -1.63
VTI1B-202ENST00000553619 ENO2P09104 434 aaPredicted RBP4.9□□□□□ -1.63
VTI1B-202ENST00000553619 SLC35E2BP0CK96 405 aa4.9□□□□□ -1.63
VTI1B-202ENST00000553619 PRSS56P0CW18 603 aa4.9□□□□□ -1.63
VTI1B-202ENST00000553619 MYL2P10916 166 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms