RNA–Protein interactions for RNA: ENST00000553043.1

LETMD1-236, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-236ENST00000553043 ZFYVE1Q9HBF4 777 aa6.47□□□□□ -1.37
LETMD1-236ENST00000553043 ZNF160Q9HCG1 818 aa6.47□□□□□ -1.37
LETMD1-236ENST00000553043 NT5MQ9NPB1 228 aa6.47□□□□□ -1.37
LETMD1-236ENST00000553043 KCNJ16Q9NPI9 418 aa6.47□□□□□ -1.37
LETMD1-236ENST00000553043 ZNHIT6Q9NWK9 470 aaKnown RBP6.47□□□□□ -1.37
LETMD1-236ENST00000553043 STMN3Q9NZ72 180 aa6.47□□□□□ -1.37
LETMD1-236ENST00000553043 FEZ2Q9UHY8 353 aaPredicted RBP6.47□□□□□ -1.37
LETMD1-236ENST00000553043 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.47□□□□□ -1.37
LETMD1-236ENST00000553043 HS3ST3B1Q9Y662 390 aa6.47□□□□□ -1.37
LETMD1-236ENST00000553043 SPTBP11277 2137 aa6.47□□□□□ -1.37
LETMD1-236ENST00000553043 HIVEP2P31629 2446 aa6.47□□□□□ -1.37
LETMD1-236ENST00000553043 SEC16AO15027 2179 aa6.47□□□□□ -1.37
LETMD1-236ENST00000553043 C1orf232A0A0U1RR37 186 aa6.46□□□□□ -1.38
LETMD1-236ENST00000553043 GSAPA4D1B5 854 aa6.46□□□□□ -1.38
LETMD1-236ENST00000553043 NPIPA5E9PKD4 350 aa6.46□□□□□ -1.38
LETMD1-236ENST00000553043 HAX1O00165 279 aa6.46□□□□□ -1.38
LETMD1-236ENST00000553043 ADAM10O14672 748 aa6.46□□□□□ -1.38
LETMD1-236ENST00000553043 SMAD7O15105 426 aaKnown RBP6.46□□□□□ -1.38
LETMD1-236ENST00000553043 OR2B3O76000 313 aa6.46□□□□□ -1.38
LETMD1-236ENST00000553043 TOXO94900 526 aa6.46□□□□□ -1.38
LETMD1-236ENST00000553043 CDK14O94921 469 aa6.46□□□□□ -1.38
LETMD1-236ENST00000553043 NDST3O95803 873 aa6.46□□□□□ -1.38
LETMD1-236ENST00000553043 WDPCPO95876 746 aa6.46□□□□□ -1.38
LETMD1-236ENST00000553043 HLA-DQB2P05538 268 aa6.46□□□□□ -1.38
LETMD1-236ENST00000553043 SKILP12757 684 aa6.46□□□□□ -1.38
LETMD1-236ENST00000553043 TCF4P15884 667 aa6.46□□□□□ -1.38
LETMD1-236ENST00000553043 VCLP18206 1134 aa6.46□□□□□ -1.38
LETMD1-236ENST00000553043 HLA-DPA1P20036 260 aa6.46□□□□□ -1.38
LETMD1-236ENST00000553043 ALAS2P22557 587 aa6.46□□□□□ -1.38
LETMD1-236ENST00000553043 PTPN7P35236 360 aa6.46□□□□□ -1.38
LETMD1-236ENST00000553043 COPS2P61201 443 aa6.46□□□□□ -1.38
LETMD1-236ENST00000553043 HSF1Q00613 529 aa6.46□□□□□ -1.38
LETMD1-236ENST00000553043 ITKQ08881 620 aa6.46□□□□□ -1.38
LETMD1-236ENST00000553043 MPP3Q13368 585 aa6.46□□□□□ -1.38
LETMD1-236ENST00000553043 OLIG2Q13516 323 aa6.46□□□□□ -1.38
LETMD1-236ENST00000553043 ITGA9Q13797 1035 aa6.46□□□□□ -1.38
LETMD1-236ENST00000553043 PPP2R5EQ16537 467 aa6.46□□□□□ -1.38
LETMD1-236ENST00000553043 RBBP7Q16576 425 aa6.46□□□□□ -1.38
LETMD1-236ENST00000553043 DEFB110Q30KQ9 67 aa6.46□□□□□ -1.38
LETMD1-236ENST00000553043 KRTCAP3Q53RY4 240 aa6.46□□□□□ -1.38
LETMD1-236ENST00000553043 ZNF569Q5MCW4 686 aa6.46□□□□□ -1.38
LETMD1-236ENST00000553043 TXNRD3NBQ6F5E7 133 aa6.46□□□□□ -1.38
LETMD1-236ENST00000553043 CCDC70Q6NSX1 233 aa6.46□□□□□ -1.38
LETMD1-236ENST00000553043 RHBDD2Q6NTF9 364 aa6.46□□□□□ -1.38
LETMD1-236ENST00000553043 CAVIN1Q6NZI2 390 aaKnown RBP6.46□□□□□ -1.38
LETMD1-236ENST00000553043 TRAPPC5Q8IUR0 188 aa6.46□□□□□ -1.38
LETMD1-236ENST00000553043 ZZZ3Q8IYH5 903 aa6.46□□□□□ -1.38
LETMD1-236ENST00000553043 CCDC170Q8IYT3 715 aa6.46□□□□□ -1.38
LETMD1-236ENST00000553043 CIARTQ8N365 385 aaPredicted RBP6.46□□□□□ -1.38
LETMD1-236ENST00000553043 ZNF655Q8N720 491 aaPredicted RBP6.46□□□□□ -1.38
LETMD1-236ENST00000553043 CNTD1Q8N815 330 aa6.46□□□□□ -1.38
LETMD1-236ENST00000553043 OR11G2Q8NGC1 345 aa6.46□□□□□ -1.38
LETMD1-236ENST00000553043 OR4E2Q8NGC2 313 aa6.46□□□□□ -1.38
LETMD1-236ENST00000553043 GOT1L1Q8NHS2 421 aaPredicted RBP6.46□□□□□ -1.38
LETMD1-236ENST00000553043 PROKR1Q8TCW9 393 aa6.46□□□□□ -1.38
LETMD1-236ENST00000553043 BRIX1Q8TDN6 353 aaKnown RBP6.46□□□□□ -1.38
LETMD1-236ENST00000553043 HEXDCQ8WVB3 486 aa6.46□□□□□ -1.38
LETMD1-236ENST00000553043 GLYATL1Q969I3 302 aa6.46□□□□□ -1.38
LETMD1-236ENST00000553043 MBD6Q96DN6 1003 aa6.46□□□□□ -1.38
LETMD1-236ENST00000553043 LINC00615Q96LM1 132 aaPredicted RBP6.46□□□□□ -1.38
LETMD1-236ENST00000553043 FCRL5Q96RD9 977 aa6.46□□□□□ -1.38
LETMD1-236ENST00000553043 MESP1Q9BRJ9 268 aa6.46□□□□□ -1.38
LETMD1-236ENST00000553043 ZCCHC2Q9C0B9 1178 aaKnown RBP6.46□□□□□ -1.38
LETMD1-236ENST00000553043 CHRNA10Q9GZZ6 450 aa6.46□□□□□ -1.38
LETMD1-236ENST00000553043 DEF6Q9H4E7 631 aa6.46□□□□□ -1.38
LETMD1-236ENST00000553043 SOX17Q9H6I2 414 aaPredicted RBP6.46□□□□□ -1.38
LETMD1-236ENST00000553043 LUC7LQ9NQ29 371 aaKnown RBP6.46□□□□□ -1.38
LETMD1-236ENST00000553043 SLC22A11Q9NSA0 550 aa6.46□□□□□ -1.38
LETMD1-236ENST00000553043 TXLNGQ9NUQ3 528 aa6.46□□□□□ -1.38
LETMD1-236ENST00000553043 IRAK4Q9NWZ3 460 aa6.46□□□□□ -1.38
LETMD1-236ENST00000553043 IL17CQ9P0M4 197 aa6.46□□□□□ -1.38
LETMD1-236ENST00000553043 CTTNBP2NLQ9P2B4 639 aa6.46□□□□□ -1.38
LETMD1-236ENST00000553043 MYO1AQ9UBC5 1043 aa6.46□□□□□ -1.38
LETMD1-236ENST00000553043 TRHDEQ9UKU6 1024 aa6.46□□□□□ -1.38
LETMD1-236ENST00000553043 POMT2Q9UKY4 750 aa6.46□□□□□ -1.38
LETMD1-236ENST00000553043 NPIPA1Q9UND3 350 aa6.46□□□□□ -1.38
LETMD1-236ENST00000553043 MRPS2Q9Y399 296 aaKnown RBP6.46□□□□□ -1.38
LETMD1-236ENST00000553043 AP1M2Q9Y6Q5 423 aa6.46□□□□□ -1.38
LETMD1-236ENST00000553043 BTNL10A8MVZ5 291 aa6.45□□□□□ -1.38
LETMD1-236ENST00000553043 MATN2O00339 956 aa6.45□□□□□ -1.38
LETMD1-236ENST00000553043 PRRG2O14669 202 aa6.45□□□□□ -1.38
LETMD1-236ENST00000553043 APOL1O14791 398 aa6.45□□□□□ -1.38
LETMD1-236ENST00000553043 ZNF500O60304 480 aaPredicted RBP6.45□□□□□ -1.38
LETMD1-236ENST00000553043 USP1O94782 785 aa6.45□□□□□ -1.38
LETMD1-236ENST00000553043 PRAMEF1O95521 474 aa6.45□□□□□ -1.38
LETMD1-236ENST00000553043 TSPAN12O95859 305 aa6.45□□□□□ -1.38
LETMD1-236ENST00000553043 CTSBP07858 339 aa6.45□□□□□ -1.38
LETMD1-236ENST00000553043 CD48P09326 243 aa6.45□□□□□ -1.38
LETMD1-236ENST00000553043 MTHFD1P11586 935 aaKnown RBP6.45□□□□□ -1.38
LETMD1-236ENST00000553043 PSMA3P25788 255 aa6.45□□□□□ -1.38
LETMD1-236ENST00000553043 NDUFS1P28331 727 aa6.45□□□□□ -1.38
LETMD1-236ENST00000553043 PRDX3P30048 256 aaKnown RBP6.45□□□□□ -1.38
LETMD1-236ENST00000553043 CD86P42081 329 aa6.45□□□□□ -1.38
LETMD1-236ENST00000553043 TMPRSS15P98073 1019 aa6.45□□□□□ -1.38
LETMD1-236ENST00000553043 ALDH6A1Q02252 535 aaKnown RBP6.45□□□□□ -1.38
LETMD1-236ENST00000553043 GBE1Q04446 702 aa6.45□□□□□ -1.38
LETMD1-236ENST00000553043 CACNG1Q06432 222 aa6.45□□□□□ -1.38
LETMD1-236ENST00000553043 NIPAL4Q0D2K0 466 aa6.45□□□□□ -1.38
LETMD1-236ENST00000553043 SLC10A2Q12908 348 aaPredicted RBP6.45□□□□□ -1.38
LETMD1-236ENST00000553043 SNTB1Q13884 538 aaKnown RBP6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms