RNA–Protein interactions for RNA: ENST00000552896.1

TRAFD1-209, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 3

Gene TRAFD1, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-209ENST00000552896 C9orf172C9J069 976 aa11.33□□□□□ -0.6
TRAFD1-209ENST00000552896 GFYI3L273 518 aa11.33□□□□□ -0.6
TRAFD1-209ENST00000552896 AGRPO00253 132 aa11.33□□□□□ -0.6
TRAFD1-209ENST00000552896 TLX3O43711 291 aaPredicted RBP11.33□□□□□ -0.6
TRAFD1-209ENST00000552896 PRAMEF10O60809 474 aa11.33□□□□□ -0.6
TRAFD1-209ENST00000552896 TSPAN12O95859 305 aa11.33□□□□□ -0.6
TRAFD1-209ENST00000552896 C8GP07360 202 aa11.33□□□□□ -0.6
TRAFD1-209ENST00000552896 CDH3P22223 829 aa11.33□□□□□ -0.6
TRAFD1-209ENST00000552896 PRDX3P30048 256 aaKnown RBP11.33□□□□□ -0.6
TRAFD1-209ENST00000552896 PEBP1P30086 187 aaKnown RBP11.33□□□□□ -0.6
TRAFD1-209ENST00000552896 SLC5A2P31639 672 aa11.33□□□□□ -0.6
TRAFD1-209ENST00000552896 SEPHS1P49903 392 aa11.33□□□□□ -0.6
TRAFD1-209ENST00000552896 IL2P60568 153 aa11.33□□□□□ -0.6
TRAFD1-209ENST00000552896 HSD11B2P80365 405 aa11.33□□□□□ -0.6
TRAFD1-209ENST00000552896 POU4F1Q01851 419 aa11.33□□□□□ -0.6
TRAFD1-209ENST00000552896 ARHGAP19Q14CB8 494 aa11.33□□□□□ -0.6
TRAFD1-209ENST00000552896 ST3GAL2Q16842 350 aa11.33□□□□□ -0.6
TRAFD1-209ENST00000552896 SLC5A12Q1EHB4 618 aa11.33□□□□□ -0.6
TRAFD1-209ENST00000552896 CCSMST1Q4G0I0 132 aa11.33□□□□□ -0.6
TRAFD1-209ENST00000552896 ANKS6Q68DC2 871 aa11.33□□□□□ -0.6
TRAFD1-209ENST00000552896 PAQR3Q6TCH7 311 aa11.33□□□□□ -0.6
TRAFD1-209ENST00000552896 CEACAM20Q6UY09 585 aa11.33□□□□□ -0.6
TRAFD1-209ENST00000552896 CTAGE3PQ8IX95 158 aa11.33□□□□□ -0.6
TRAFD1-209ENST00000552896 MYO1HQ8N1T3 1032 aa11.33□□□□□ -0.6
TRAFD1-209ENST00000552896 D2HGDHQ8N465 521 aa11.33□□□□□ -0.6
TRAFD1-209ENST00000552896 EIF1ADQ8N9N8 165 aaKnown RBP11.33□□□□□ -0.6
TRAFD1-209ENST00000552896 LINC01555Q8NAE3 123 aa11.33□□□□□ -0.6
TRAFD1-209ENST00000552896 FLVCR1-AS1Q8TAF5 88 aa11.33□□□□□ -0.6
TRAFD1-209ENST00000552896 DENND1AQ8TEH3 1009 aa11.33□□□□□ -0.6
TRAFD1-209ENST00000552896 SLC22A18Q96BI1 424 aa11.33□□□□□ -0.6
TRAFD1-209ENST00000552896 LINGO1Q96FE5 620 aa11.33□□□□□ -0.6
TRAFD1-209ENST00000552896 OR2A14Q96R47 310 aa11.33□□□□□ -0.6
TRAFD1-209ENST00000552896 GPR22Q99680 433 aa11.33□□□□□ -0.6
TRAFD1-209ENST00000552896 ZPBPQ9BS86 351 aa11.33□□□□□ -0.6
TRAFD1-209ENST00000552896 FUT8Q9BYC5 575 aa11.33□□□□□ -0.6
TRAFD1-209ENST00000552896 ASPSCR1Q9BZE9 553 aa11.33□□□□□ -0.6
TRAFD1-209ENST00000552896 ACSS3Q9H6R3 686 aa11.33□□□□□ -0.6
TRAFD1-209ENST00000552896 SOHLH2Q9NX45 425 aa11.33□□□□□ -0.6
TRAFD1-209ENST00000552896 SLC39A1Q9NY26 324 aa11.33□□□□□ -0.6
TRAFD1-209ENST00000552896 FOXJ2Q9P0K8 574 aa11.33□□□□□ -0.6
TRAFD1-209ENST00000552896 ZMIZ1Q9ULJ6 1067 aa11.33□□□□□ -0.6
TRAFD1-209ENST00000552896 NFU1Q9UMS0 254 aa11.33□□□□□ -0.6
TRAFD1-209ENST00000552896 PCDHB11Q9Y5F2 797 aa11.33□□□□□ -0.6
TRAFD1-209ENST00000552896 LAMA5O15230 3695 aa11.33□□□□□ -0.6
TRAFD1-209ENST00000552896 CACNA1BQ00975 2339 aa11.32□□□□□ -0.6
TRAFD1-209ENST00000552896 A0A0J9YY10 115 aa11.32□□□□□ -0.6
TRAFD1-209ENST00000552896 KRT87PA6NCN2 255 aa11.32□□□□□ -0.6
TRAFD1-209ENST00000552896 ZNF839A8K0R7 811 aa11.32□□□□□ -0.6
TRAFD1-209ENST00000552896 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.32□□□□□ -0.6
TRAFD1-209ENST00000552896 PIAS1O75925 651 aa11.32□□□□□ -0.6
TRAFD1-209ENST00000552896 FKBP9O95302 570 aa11.32□□□□□ -0.6
TRAFD1-209ENST00000552896 MSL3P1P0C860 447 aa11.32□□□□□ -0.6
TRAFD1-209ENST00000552896 CYP2A7P20853 494 aa11.32□□□□□ -0.6
TRAFD1-209ENST00000552896 MAP4P27816 1152 aaKnown RBP11.32□□□□□ -0.6
TRAFD1-209ENST00000552896 TNFRSF8P28908 595 aa11.32□□□□□ -0.6
TRAFD1-209ENST00000552896 HSD17B2P37059 387 aa11.32□□□□□ -0.6
TRAFD1-209ENST00000552896 ARL4DP49703 201 aa11.32□□□□□ -0.6
TRAFD1-209ENST00000552896 TUBB3Q13509 450 aa11.32□□□□□ -0.6
TRAFD1-209ENST00000552896 IL11RAQ14626 422 aa11.32□□□□□ -0.6
TRAFD1-209ENST00000552896 SLMAPQ14BN4 828 aa11.32□□□□□ -0.6
TRAFD1-209ENST00000552896 EFTUD2Q15029 972 aaKnown RBP eCLIP11.32□□□□□ -0.6
TRAFD1-209ENST00000552896 CYP2A13Q16696 494 aa11.32□□□□□ -0.6
TRAFD1-209ENST00000552896 TEX35Q5T0J7 233 aa11.32□□□□□ -0.6
TRAFD1-209ENST00000552896 DCAF12Q5T6F0 453 aa11.32□□□□□ -0.6
TRAFD1-209ENST00000552896 GRTP1Q5TC63 336 aa11.32□□□□□ -0.6
TRAFD1-209ENST00000552896 CYHR1Q6ZMK1 362 aa11.32□□□□□ -0.6
TRAFD1-209ENST00000552896 UBE2R2Q712K3 238 aaPredicted RBP11.32□□□□□ -0.6
TRAFD1-209ENST00000552896 PPM1NQ8N819 430 aa11.32□□□□□ -0.6
TRAFD1-209ENST00000552896 C19orf47Q8N9M1 422 aaKnown RBP11.32□□□□□ -0.6
TRAFD1-209ENST00000552896 ZNF248Q8NDW4 579 aa11.32□□□□□ -0.6
TRAFD1-209ENST00000552896 OR9A1PQ8NGU1 263 aa11.32□□□□□ -0.6
TRAFD1-209ENST00000552896 EEF1AKMT1Q8WVE0 214 aa11.32□□□□□ -0.6
TRAFD1-209ENST00000552896 USP7Q93009 1102 aa11.32□□□□□ -0.6
TRAFD1-209ENST00000552896 PMEPA1Q969W9 287 aa11.32□□□□□ -0.6
TRAFD1-209ENST00000552896 TSPAN17Q96FV3 270 aa11.32□□□□□ -0.6
TRAFD1-209ENST00000552896 PPM1MQ96MI6 270 aa11.32□□□□□ -0.6
TRAFD1-209ENST00000552896 IL17FQ96PD4 163 aa11.32□□□□□ -0.6
TRAFD1-209ENST00000552896 CYTH2Q99418 400 aa11.32□□□□□ -0.6
TRAFD1-209ENST00000552896 SPHK1Q9NYA1 384 aa11.32□□□□□ -0.6
TRAFD1-209ENST00000552896 CIDEBQ9UHD4 219 aa11.32□□□□□ -0.6
TRAFD1-209ENST00000552896 LNPEPQ9UIQ6 1025 aa11.32□□□□□ -0.6
TRAFD1-209ENST00000552896 RAXQ9Y2V3 346 aa11.32□□□□□ -0.6
TRAFD1-209ENST00000552896 B3GALT1Q9Y5Z6 326 aa11.32□□□□□ -0.6
TRAFD1-209ENST00000552896 A0A087WV48 116 aa11.31□□□□□ -0.6
TRAFD1-209ENST00000552896 TAF4O00268 1085 aa11.31□□□□□ -0.6
TRAFD1-209ENST00000552896 POLR1CO15160 346 aaPredicted RBP11.31□□□□□ -0.6
TRAFD1-209ENST00000552896 SLC16A5O15375 505 aa11.31□□□□□ -0.6
TRAFD1-209ENST00000552896 ZBTB14O43829 449 aa11.31□□□□□ -0.6
TRAFD1-209ENST00000552896 WISP3O95389 354 aaPredicted RBP11.31□□□□□ -0.6
TRAFD1-209ENST00000552896 ACSL3O95573 720 aa11.31□□□□□ -0.6
TRAFD1-209ENST00000552896 ABHD2P08910 425 aa11.31□□□□□ -0.6
TRAFD1-209ENST00000552896 EBLN1P0CF75 366 aa11.31□□□□□ -0.6
TRAFD1-209ENST00000552896 FGF5P12034 268 aa11.31□□□□□ -0.6
TRAFD1-209ENST00000552896 ST6GAL1P15907 406 aa11.31□□□□□ -0.6
TRAFD1-209ENST00000552896 SPRP35270 261 aaPredicted RBP11.31□□□□□ -0.6
TRAFD1-209ENST00000552896 EIF2S3P41091 472 aaKnown RBP11.31□□□□□ -0.6
TRAFD1-209ENST00000552896 SLC12A2P55011 1212 aa11.31□□□□□ -0.6
TRAFD1-209ENST00000552896 TAS2R39P59534 338 aa11.31□□□□□ -0.6
TRAFD1-209ENST00000552896 TUBB4BP68371 445 aa11.31□□□□□ -0.6
TRAFD1-209ENST00000552896 SH3BP2P78314 561 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms