RNA–Protein interactions for RNA: ENST00000552208.1

LSM6P2-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM6P2, Length 177 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P2-201ENST00000552208 FIG4Q92562 907 aa3.84□□□□□ -1.79
LSM6P2-201ENST00000552208 STAMBPL1Q96FJ0 436 aa3.84□□□□□ -1.79
LSM6P2-201ENST00000552208 EEF2KMTQ96G04 330 aa3.84□□□□□ -1.79
LSM6P2-201ENST00000552208 EPSTI1Q96J88 318 aa3.84□□□□□ -1.79
LSM6P2-201ENST00000552208 RUFY1Q96T51 708 aa3.84□□□□□ -1.79
LSM6P2-201ENST00000552208 ATG101Q9BSB4 218 aa3.84□□□□□ -1.79
LSM6P2-201ENST00000552208 LRMDAQ9H2I8 198 aa3.84□□□□□ -1.79
LSM6P2-201ENST00000552208 ING1Q9UK53 422 aaPredicted RBP3.84□□□□□ -1.79
LSM6P2-201ENST00000552208 SNX9Q9Y5X1 595 aa3.84□□□□□ -1.79
LSM6P2-201ENST00000552208 SPIN1Q9Y657 262 aaPredicted RBP3.84□□□□□ -1.79
LSM6P2-201ENST00000552208 PDS5AQ29RF7 1337 aaKnown RBP3.84□□□□□ -1.79
LSM6P2-201ENST00000552208 ILVBLA1L0T0 632 aa3.83□□□□□ -1.8
LSM6P2-201ENST00000552208 C15orf62A8K5M9 175 aa3.83□□□□□ -1.8
LSM6P2-201ENST00000552208 TXNL1O43396 289 aa3.83□□□□□ -1.8
LSM6P2-201ENST00000552208 BUD23O43709 281 aaKnown RBP3.83□□□□□ -1.8
LSM6P2-201ENST00000552208 LDB3O75112 727 aa3.83□□□□□ -1.8
LSM6P2-201ENST00000552208 GLCEO94923 617 aa3.83□□□□□ -1.8
LSM6P2-201ENST00000552208 CLDN14O95500 239 aa3.83□□□□□ -1.8
LSM6P2-201ENST00000552208 C9P02748 559 aa3.83□□□□□ -1.8
LSM6P2-201ENST00000552208 MYOD1P15172 320 aa3.83□□□□□ -1.8
LSM6P2-201ENST00000552208 KELP23276 732 aa3.83□□□□□ -1.8
LSM6P2-201ENST00000552208 AHCYP23526 432 aa3.83□□□□□ -1.8
LSM6P2-201ENST00000552208 C21orf33P30042 268 aaPredicted RBP3.83□□□□□ -1.8
LSM6P2-201ENST00000552208 HOXA11P31270 313 aaPredicted RBP3.83□□□□□ -1.8
LSM6P2-201ENST00000552208 RABIFP47224 123 aa3.83□□□□□ -1.8
LSM6P2-201ENST00000552208 ATXN3P54252 364 aaPredicted RBP3.83□□□□□ -1.8
LSM6P2-201ENST00000552208 HSD17B7P56937 341 aa3.83□□□□□ -1.8
LSM6P2-201ENST00000552208 HTD2P86397 168 aa3.83□□□□□ -1.8
LSM6P2-201ENST00000552208 ZNF234Q14588 700 aa3.83□□□□□ -1.8
LSM6P2-201ENST00000552208 UGT3A2Q3SY77 523 aa3.83□□□□□ -1.8
LSM6P2-201ENST00000552208 TDRD12Q587J7 1177 aaKnown RBP3.83□□□□□ -1.8
LSM6P2-201ENST00000552208 KCTD11Q693B1 232 aa3.83□□□□□ -1.8
LSM6P2-201ENST00000552208 FAM166AQ6J272 317 aa3.83□□□□□ -1.8
LSM6P2-201ENST00000552208 C8orf82Q6P1X6 216 aaPredicted RBP3.83□□□□□ -1.8
LSM6P2-201ENST00000552208 ZCCHC12Q6PEW1 402 aa3.83□□□□□ -1.8
LSM6P2-201ENST00000552208 SHC4Q6S5L8 630 aa3.83□□□□□ -1.8
LSM6P2-201ENST00000552208 GFRALQ6UXV0 394 aa3.83□□□□□ -1.8
LSM6P2-201ENST00000552208 RAD9BQ6WBX8 426 aa3.83□□□□□ -1.8
LSM6P2-201ENST00000552208 CCNI2Q6ZMN8 369 aaPredicted RBP3.83□□□□□ -1.8
LSM6P2-201ENST00000552208 IL17RELQ6ZVW7 336 aa3.83□□□□□ -1.8
LSM6P2-201ENST00000552208 RD3Q7Z3Z2 195 aa3.83□□□□□ -1.8
LSM6P2-201ENST00000552208 PHLDB2Q86SQ0 1253 aa3.83□□□□□ -1.8
LSM6P2-201ENST00000552208 ZNF410Q86VK4 478 aa3.83□□□□□ -1.8
LSM6P2-201ENST00000552208 COMMD2Q86X83 199 aa3.83□□□□□ -1.8
LSM6P2-201ENST00000552208 SERPINA12Q8IW75 414 aa3.83□□□□□ -1.8
LSM6P2-201ENST00000552208 HSCBQ8IWL3 235 aa3.83□□□□□ -1.8
LSM6P2-201ENST00000552208 AQP12AQ8IXF9 295 aa3.83□□□□□ -1.8
LSM6P2-201ENST00000552208 KLHDC8AQ8IYD2 350 aa3.83□□□□□ -1.8
LSM6P2-201ENST00000552208 RNF113BQ8IZP6 322 aaKnown RBP3.83□□□□□ -1.8
LSM6P2-201ENST00000552208 PRR26Q8N8Z3 221 aa3.83□□□□□ -1.8
LSM6P2-201ENST00000552208 RASGEF1AQ8N9B8 481 aa3.83□□□□□ -1.8
LSM6P2-201ENST00000552208 NPEPL1Q8NDH3 523 aa3.83□□□□□ -1.8
LSM6P2-201ENST00000552208 KIAA1524Q8TCG1 905 aa3.83□□□□□ -1.8
LSM6P2-201ENST00000552208 URGCPQ8TCY9 931 aa3.83□□□□□ -1.8
LSM6P2-201ENST00000552208 PROX1Q92786 737 aa3.83□□□□□ -1.8
LSM6P2-201ENST00000552208 TANKQ92844 425 aa3.83□□□□□ -1.8
LSM6P2-201ENST00000552208 PHF21AQ96BD5 680 aa3.83□□□□□ -1.8
LSM6P2-201ENST00000552208 MRPL38Q96DV4 380 aaKnown RBP3.83□□□□□ -1.8
LSM6P2-201ENST00000552208 SCMH1Q96GD3 660 aa3.83□□□□□ -1.8
LSM6P2-201ENST00000552208 ACPTQ9BZG2 426 aa3.83□□□□□ -1.8
LSM6P2-201ENST00000552208 ABCG8Q9H221 673 aa3.83□□□□□ -1.8
LSM6P2-201ENST00000552208 RIOX1Q9H6W3 641 aa3.83□□□□□ -1.8
LSM6P2-201ENST00000552208 LIN28AQ9H9Z2 209 aaKnown RBP3.83□□□□□ -1.8
LSM6P2-201ENST00000552208 INTS10Q9NVR2 710 aaKnown RBP3.83□□□□□ -1.8
LSM6P2-201ENST00000552208 TAS2R3Q9NYW6 316 aa3.83□□□□□ -1.8
LSM6P2-201ENST00000552208 ACTR3BQ9P1U1 418 aa3.83□□□□□ -1.8
LSM6P2-201ENST00000552208 TXNDC16Q9P2K2 825 aa3.83□□□□□ -1.8
LSM6P2-201ENST00000552208 MAD2L2Q9UI95 211 aa3.83□□□□□ -1.8
LSM6P2-201ENST00000552208 TRMT6Q9UJA5 497 aaKnown RBP3.83□□□□□ -1.8
LSM6P2-201ENST00000552208 FZD10Q9ULW2 581 aa3.83□□□□□ -1.8
LSM6P2-201ENST00000552208 WDR83OSQ9Y284 106 aa3.83□□□□□ -1.8
LSM6P2-201ENST00000552208 TDRKHQ9Y2W6 561 aaKnown RBP3.83□□□□□ -1.8
LSM6P2-201ENST00000552208 AMDHD2Q9Y303 409 aa3.83□□□□□ -1.8
LSM6P2-201ENST00000552208 KLK4Q9Y5K2 254 aa3.83□□□□□ -1.8
LSM6P2-201ENST00000552208 PTGDR2Q9Y5Y4 395 aa3.83□□□□□ -1.8
LSM6P2-201ENST00000552208 ARHGEF17Q96PE2 2063 aaPredicted RBP3.83□□□□□ -1.8
LSM6P2-201ENST00000552208 IGLV5-52A0A0A0MRZ9 124 aa3.82□□□□□ -1.8
LSM6P2-201ENST00000552208 MED19A0JLT2 244 aaPredicted RBP3.82□□□□□ -1.8
LSM6P2-201ENST00000552208 SYCE3A1L190 88 aa3.82□□□□□ -1.8
LSM6P2-201ENST00000552208 CLEC18AA5D8T8 446 aa3.82□□□□□ -1.8
LSM6P2-201ENST00000552208 OR6C75A6NL08 312 aa3.82□□□□□ -1.8
LSM6P2-201ENST00000552208 PLOD2O00469 737 aa3.82□□□□□ -1.8
LSM6P2-201ENST00000552208 TNFRSF13BO14836 293 aaPredicted RBP3.82□□□□□ -1.8
LSM6P2-201ENST00000552208 RNASEH1O60930 286 aaKnown RBP3.82□□□□□ -1.8
LSM6P2-201ENST00000552208 WDR1O75083 606 aa3.82□□□□□ -1.8
LSM6P2-201ENST00000552208 ATP9AO75110 1047 aa3.82□□□□□ -1.8
LSM6P2-201ENST00000552208 SOCS5O75159 536 aa3.82□□□□□ -1.8
LSM6P2-201ENST00000552208 ABHD2P08910 425 aa3.82□□□□□ -1.8
LSM6P2-201ENST00000552208 FAM106CPP0CH98 169 aa3.82□□□□□ -1.8
LSM6P2-201ENST00000552208 ACP2P11117 423 aa3.82□□□□□ -1.8
LSM6P2-201ENST00000552208 CSF2RAP15509 400 aa3.82□□□□□ -1.8
LSM6P2-201ENST00000552208 HOXD3P31249 432 aaPredicted RBP3.82□□□□□ -1.8
LSM6P2-201ENST00000552208 KIF5BP33176 963 aa3.82□□□□□ -1.8
LSM6P2-201ENST00000552208 GDF5P43026 501 aa3.82□□□□□ -1.8
LSM6P2-201ENST00000552208 MAGEB1P43366 347 aa3.82□□□□□ -1.8
LSM6P2-201ENST00000552208 OR3A1P47881 315 aa3.82□□□□□ -1.8
LSM6P2-201ENST00000552208 ARCN1P48444 511 aaKnown RBP3.82□□□□□ -1.8
LSM6P2-201ENST00000552208 TGFB2P61812 414 aa3.82□□□□□ -1.8
LSM6P2-201ENST00000552208 PDE7AQ13946 482 aa3.82□□□□□ -1.8
LSM6P2-201ENST00000552208 EFHC1Q5JVL4 640 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms