RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 SH3GL1Q99961 368 aa13.42□□□□□ -0.26
HDAC7-228ENST00000548938 EPS8L2Q9H6S3 715 aa13.42□□□□□ -0.26
HDAC7-228ENST00000548938 IFT52Q9Y366 437 aa13.42□□□□□ -0.26
HDAC7-228ENST00000548938 NOX1Q9Y5S8 564 aa13.42□□□□□ -0.26
HDAC7-228ENST00000548938 A0A0D9SEW6 157 aa13.41□□□□□ -0.26
HDAC7-228ENST00000548938 OR2A25A4D2G3 310 aa13.41□□□□□ -0.26
HDAC7-228ENST00000548938 MYO1GB0I1T2 1018 aa13.41□□□□□ -0.26
HDAC7-228ENST00000548938 AOC2O75106 756 aa13.41□□□□□ -0.26
HDAC7-228ENST00000548938 RECQL5O94762 991 aaPredicted RBP13.41□□□□□ -0.26
HDAC7-228ENST00000548938 ZNF682O95780 498 aa13.41□□□□□ -0.26
HDAC7-228ENST00000548938 KEAP1Q14145 624 aa13.41□□□□□ -0.26
HDAC7-228ENST00000548938 MAD2L1BPQ15013 274 aaPredicted RBP13.41□□□□□ -0.26
HDAC7-228ENST00000548938 PCBP2Q15366 365 aaKnown RBP eCLIP13.41□□□□□ -0.26
HDAC7-228ENST00000548938 SLC39A12Q504Y0 691 aa13.41□□□□□ -0.26
HDAC7-228ENST00000548938 SGO1Q5FBB7 561 aa13.41□□□□□ -0.26
HDAC7-228ENST00000548938 ZRANB3Q5FWF4 1079 aa13.41□□□□□ -0.26
HDAC7-228ENST00000548938 CALHM3Q86XJ0 350 aa13.41□□□□□ -0.26
HDAC7-228ENST00000548938 CCDC71Q8IV32 467 aaPredicted RBP13.41□□□□□ -0.26
HDAC7-228ENST00000548938 PLPP6Q8IY26 295 aa13.41□□□□□ -0.26
HDAC7-228ENST00000548938 KLHDC9Q8NEP7 349 aa13.41□□□□□ -0.26
HDAC7-228ENST00000548938 CPPED1Q9BRF8 314 aaPredicted RBP13.41□□□□□ -0.26
HDAC7-228ENST00000548938 C6orf62Q9GZU0 229 aaPredicted RBP13.41□□□□□ -0.26
HDAC7-228ENST00000548938 GABARAPL1Q9H0R8 117 aa13.41□□□□□ -0.26
HDAC7-228ENST00000548938 NSUN3Q9H649 340 aaKnown RBP13.41□□□□□ -0.26
HDAC7-228ENST00000548938 CLMPQ9H6B4 373 aa13.41□□□□□ -0.26
HDAC7-228ENST00000548938 PDFQ9HBH1 243 aa13.41□□□□□ -0.26
HDAC7-228ENST00000548938 ISPDA4D126 451 aa13.41□□□□□ -0.26
HDAC7-228ENST00000548938 SEPT4O43236 478 aa13.41□□□□□ -0.26
HDAC7-228ENST00000548938 GUCA1CO95843 209 aa13.41□□□□□ -0.26
HDAC7-228ENST00000548938 ALDH1A1P00352 501 aa13.41□□□□□ -0.26
HDAC7-228ENST00000548938 OTCP00480 354 aa13.41□□□□□ -0.26
HDAC7-228ENST00000548938 GTF2E2P29084 291 aaKnown RBP13.41□□□□□ -0.26
HDAC7-228ENST00000548938 LIPAP38571 399 aa13.41□□□□□ -0.26
HDAC7-228ENST00000548938 GZMMP51124 257 aa13.41□□□□□ -0.26
HDAC7-228ENST00000548938 CXCR4P61073 352 aa13.41□□□□□ -0.26
HDAC7-228ENST00000548938 PHC1P78364 1004 aa13.41□□□□□ -0.26
HDAC7-228ENST00000548938 TAF1AQ15573 450 aaPredicted RBP13.41□□□□□ -0.26
HDAC7-228ENST00000548938 ZNF404Q494X3 552 aa13.41□□□□□ -0.26
HDAC7-228ENST00000548938 GDF6Q6KF10 455 aaPredicted RBP13.41□□□□□ -0.26
HDAC7-228ENST00000548938 SBSNQ6UWP8 590 aa13.41□□□□□ -0.26
HDAC7-228ENST00000548938 NANOGNBQ7Z5D8 188 aa13.41□□□□□ -0.26
HDAC7-228ENST00000548938 MON1AQ86VX9 555 aa13.41□□□□□ -0.26
HDAC7-228ENST00000548938 KIAA1958Q8N8K9 716 aa13.41□□□□□ -0.26
HDAC7-228ENST00000548938 TTC29Q8NA56 475 aaPredicted RBP13.41□□□□□ -0.26
HDAC7-228ENST00000548938 KCNJ9Q92806 393 aa13.41□□□□□ -0.26
HDAC7-228ENST00000548938 CLSTN3Q9BQT9 956 aa13.41□□□□□ -0.26
HDAC7-228ENST00000548938 TESMINQ9Y4I5 508 aa13.41□□□□□ -0.26
HDAC7-228ENST00000548938 AGAP5A6NIR3 686 aa13.41□□□□□ -0.26
HDAC7-228ENST00000548938 A6NL46 340 aa13.41□□□□□ -0.26
HDAC7-228ENST00000548938 H0Y626 953 aa13.41□□□□□ -0.26
HDAC7-228ENST00000548938 M0QZQ0 153 aa13.41□□□□□ -0.26
HDAC7-228ENST00000548938 ASNA1O43681 348 aa13.41□□□□□ -0.26
HDAC7-228ENST00000548938 TRIM16O95361 564 aa13.41□□□□□ -0.26
HDAC7-228ENST00000548938 IL6P05231 212 aa13.41□□□□□ -0.26
HDAC7-228ENST00000548938 HOXA9P31269 272 aa13.41□□□□□ -0.26
HDAC7-228ENST00000548938 MAGEA2P43356 314 aa13.41□□□□□ -0.26
HDAC7-228ENST00000548938 TTPAP49638 278 aa13.41□□□□□ -0.26
HDAC7-228ENST00000548938 CLK1P49759 484 aaKnown RBP13.41□□□□□ -0.26
HDAC7-228ENST00000548938 MVKQ03426 396 aa13.41□□□□□ -0.26
HDAC7-228ENST00000548938 FADDQ13158 208 aa13.41□□□□□ -0.26
HDAC7-228ENST00000548938 PRSS36Q5K4E3 855 aa13.41□□□□□ -0.26
HDAC7-228ENST00000548938 ATG9BQ674R7 924 aa13.41□□□□□ -0.26
HDAC7-228ENST00000548938 KDM4DQ6B0I6 523 aa13.41□□□□□ -0.26
HDAC7-228ENST00000548938 UTS2BQ765I0 119 aa13.41□□□□□ -0.26
HDAC7-228ENST00000548938 GALNT10Q86SR1 603 aa13.41□□□□□ -0.26
HDAC7-228ENST00000548938 ANKRD46Q86W74 232 aa13.41□□□□□ -0.26
HDAC7-228ENST00000548938 THEM5Q8N1Q8 247 aa13.41□□□□□ -0.26
HDAC7-228ENST00000548938 EFHBQ8N7U6 833 aa13.41□□□□□ -0.26
HDAC7-228ENST00000548938 GPR152Q8TDT2 470 aa13.41□□□□□ -0.26
HDAC7-228ENST00000548938 APOL4Q9BPW4 351 aa13.41□□□□□ -0.26
HDAC7-228ENST00000548938 TMEM98Q9Y2Y6 226 aa13.41□□□□□ -0.26
HDAC7-228ENST00000548938 METTL15A6NJ78 407 aa13.4□□□□□ -0.26
HDAC7-228ENST00000548938 CLDN24A6NM45 220 aa13.4□□□□□ -0.26
HDAC7-228ENST00000548938 C2orf81A6NN90 581 aa13.4□□□□□ -0.26
HDAC7-228ENST00000548938 hCG_2039718K7EN88 272 aa13.4□□□□□ -0.26
HDAC7-228ENST00000548938 PER2O15055 1255 aa13.4□□□□□ -0.26
HDAC7-228ENST00000548938 RGS14O43566 566 aa13.4□□□□□ -0.26
HDAC7-228ENST00000548938 GDF5P43026 501 aa13.4□□□□□ -0.26
HDAC7-228ENST00000548938 CLCN7P51798 805 aa13.4□□□□□ -0.26
HDAC7-228ENST00000548938 DESI1Q6ICB0 168 aa13.4□□□□□ -0.26
HDAC7-228ENST00000548938 SNX20Q7Z614 316 aa13.4□□□□□ -0.26
HDAC7-228ENST00000548938 CFAP52Q8N1V2 620 aa13.4□□□□□ -0.26
HDAC7-228ENST00000548938 LPCAT1Q8NF37 534 aa13.4□□□□□ -0.26
HDAC7-228ENST00000548938 INPP5KQ9BT40 448 aa13.4□□□□□ -0.26
HDAC7-228ENST00000548938 ITM2CQ9NQX7 267 aa13.4□□□□□ -0.26
HDAC7-228ENST00000548938 ELOVL2Q9NXB9 296 aa13.4□□□□□ -0.26
HDAC7-228ENST00000548938 IL37Q9NZH6 218 aa13.4□□□□□ -0.26
HDAC7-228ENST00000548938 HECAQ9UBI9 543 aaPredicted RBP13.4□□□□□ -0.26
HDAC7-228ENST00000548938 AGO1Q9UL18 857 aaKnown RBP13.4□□□□□ -0.26
HDAC7-228ENST00000548938 NDRG4Q9ULP0 352 aaKnown RBP13.4□□□□□ -0.26
HDAC7-228ENST00000548938 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.4□□□□□ -0.264e-6■■■□□ 18.5
HDAC7-228ENST00000548938 SCML2Q9UQR0 700 aa13.4□□□□□ -0.26
HDAC7-228ENST00000548938 HSPE1-MOB4S4R3N1 261 aa13.4□□□□□ -0.26
HDAC7-228ENST00000548938 SCN10AQ9Y5Y9 1956 aa13.4□□□□□ -0.26
HDAC7-228ENST00000548938 PABPN1LA6NDY0 278 aaKnown RBP13.4□□□□□ -0.27
HDAC7-228ENST00000548938 FFAR2O15552 330 aa13.4□□□□□ -0.27
HDAC7-228ENST00000548938 TPD52L2O43399 206 aaKnown RBP13.4□□□□□ -0.27
HDAC7-228ENST00000548938 ADAMTS4O75173 837 aa13.4□□□□□ -0.27
HDAC7-228ENST00000548938 SEC22BO75396 215 aa13.4□□□□□ -0.27
HDAC7-228ENST00000548938 WBP4O75554 376 aaKnown RBP13.4□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms