RNA–Protein interactions for RNA: ENST00000548823.1

CTDSP2-204, Transcript of CTD small phosphatase 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSP2, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-204ENST00000548823 PIM3Q86V86 326 aa19.5■□□□□ 0.71
CTDSP2-204ENST00000548823 DTX1Q86Y01 620 aa19.5■□□□□ 0.71
CTDSP2-204ENST00000548823 TMIEQ8NEW7 156 aa19.5■□□□□ 0.71
CTDSP2-204ENST00000548823 DTX3LQ8TDB6 740 aa19.5■□□□□ 0.71
CTDSP2-204ENST00000548823 L3HYPDHQ96EM0 354 aa19.5■□□□□ 0.71
CTDSP2-204ENST00000548823 GFM1Q96RP9 751 aaKnown RBP19.5■□□□□ 0.71
CTDSP2-204ENST00000548823 TRMOQ9BU70 441 aa19.5■□□□□ 0.71
CTDSP2-204ENST00000548823 ZDHHC6Q9H6R6 413 aa19.5■□□□□ 0.71
CTDSP2-204ENST00000548823 DYRK4Q9NR20 520 aa19.5■□□□□ 0.71
CTDSP2-204ENST00000548823 PNPOQ9NVS9 261 aa19.5■□□□□ 0.71
CTDSP2-204ENST00000548823 DKK3Q9UBP4 350 aa19.5■□□□□ 0.71
CTDSP2-204ENST00000548823 VTI1BQ9UEU0 232 aa19.5■□□□□ 0.71
CTDSP2-204ENST00000548823 LNPEPQ9UIQ6 1025 aa19.5■□□□□ 0.71
CTDSP2-204ENST00000548823 TMCO1Q9UM00 188 aa19.5■□□□□ 0.71
CTDSP2-204ENST00000548823 NPIPB15A6NHN6 443 aaPredicted RBP19.49■□□□□ 0.71
CTDSP2-204ENST00000548823 A8MT66 165 aa19.49■□□□□ 0.71
CTDSP2-204ENST00000548823 H3BMM5 538 aa19.49■□□□□ 0.71
CTDSP2-204ENST00000548823 FCHO1O14526 889 aa19.49■□□□□ 0.71
CTDSP2-204ENST00000548823 T-ENOLP0DO92 83 aa19.49■□□□□ 0.71
CTDSP2-204ENST00000548823 KITP10721 976 aa19.49■□□□□ 0.71
CTDSP2-204ENST00000548823 ZNF30P17039 623 aa19.49■□□□□ 0.71
CTDSP2-204ENST00000548823 BPIP17213 487 aa19.49■□□□□ 0.71
CTDSP2-204ENST00000548823 CCKBRP32239 447 aa19.49■□□□□ 0.71
CTDSP2-204ENST00000548823 RPL14P50914 215 aaKnown RBP19.49■□□□□ 0.71
CTDSP2-204ENST00000548823 KCNAB2Q13303 367 aa19.49■□□□□ 0.71
CTDSP2-204ENST00000548823 TUBB3Q13509 450 aa19.49■□□□□ 0.71
CTDSP2-204ENST00000548823 CTSL3PQ5NE16 218 aa19.49■□□□□ 0.71
CTDSP2-204ENST00000548823 HIST2H2BCQ6DN03 193 aa19.49■□□□□ 0.71
CTDSP2-204ENST00000548823 TAS2R42Q7RTR8 314 aa19.49■□□□□ 0.71
CTDSP2-204ENST00000548823 RBFAQ8N0V3 343 aa19.49■□□□□ 0.71
CTDSP2-204ENST00000548823 SPATA6LQ8N4H0 392 aa19.49■□□□□ 0.71
CTDSP2-204ENST00000548823 KIAA1191Q96A73 305 aa19.49■□□□□ 0.71
CTDSP2-204ENST00000548823 PDLIM5Q96HC4 596 aaKnown RBP19.49■□□□□ 0.71
CTDSP2-204ENST00000548823 TMEM74Q96NL1 305 aa19.49■□□□□ 0.71
CTDSP2-204ENST00000548823 PLEKHG4BQ96PX9 1271 aa19.49■□□□□ 0.71
CTDSP2-204ENST00000548823 IL26Q9NPH9 171 aa19.49■□□□□ 0.71
CTDSP2-204ENST00000548823 MARCOQ9UEW3 520 aaPredicted RBP19.49■□□□□ 0.71
CTDSP2-204ENST00000548823 GLYATL1P3A0A0U1RQE8 302 aa19.48■□□□□ 0.71
CTDSP2-204ENST00000548823 D6RAR5 112 aa19.48■□□□□ 0.71
CTDSP2-204ENST00000548823 LMO7DNF2Z398 122 aa19.48■□□□□ 0.71
CTDSP2-204ENST00000548823 MATN2O00339 956 aa19.48■□□□□ 0.71
CTDSP2-204ENST00000548823 SMIM24O75264 130 aa19.48■□□□□ 0.71
CTDSP2-204ENST00000548823 PRAMEF1O95521 474 aa19.48■□□□□ 0.71
CTDSP2-204ENST00000548823 PAK4O96013 591 aaPredicted RBP19.48■□□□□ 0.71
CTDSP2-204ENST00000548823 UGT2B4P06133 528 aa19.48■□□□□ 0.71
CTDSP2-204ENST00000548823 TPBGLP0DKB5 382 aa19.48■□□□□ 0.71
CTDSP2-204ENST00000548823 CYP2A6P11509 494 aaPredicted RBP19.48■□□□□ 0.71
CTDSP2-204ENST00000548823 IMPDH1P20839 514 aa19.48■□□□□ 0.71
CTDSP2-204ENST00000548823 RPS21P63220 83 aaKnown RBP19.48■□□□□ 0.71
CTDSP2-204ENST00000548823 EIF2B5Q13144 721 aaKnown RBP19.48■□□□□ 0.71
CTDSP2-204ENST00000548823 NFATC2Q13469 925 aa19.48■□□□□ 0.71
CTDSP2-204ENST00000548823 FGL2Q14314 439 aa19.48■□□□□ 0.71
CTDSP2-204ENST00000548823 ARL13AQ5H913 290 aaPredicted RBP19.48■□□□□ 0.71
CTDSP2-204ENST00000548823 METTL21CQ5VZV1 264 aa19.48■□□□□ 0.71
CTDSP2-204ENST00000548823 EPGNQ6UW88 154 aa19.48■□□□□ 0.71
CTDSP2-204ENST00000548823 ERN2Q76MJ5 926 aaKnown RBP19.48■□□□□ 0.71
CTDSP2-204ENST00000548823 ZFAND4Q86XD8 727 aa19.48■□□□□ 0.71
CTDSP2-204ENST00000548823 ZNF781Q8N8C0 355 aa19.48■□□□□ 0.71
CTDSP2-204ENST00000548823 CHST14Q8NCH0 376 aa19.48■□□□□ 0.71
CTDSP2-204ENST00000548823 HDAC8Q9BY41 377 aa19.48■□□□□ 0.71
CTDSP2-204ENST00000548823 NFKBIL1Q9UBC1 381 aaPredicted RBP19.48■□□□□ 0.71
CTDSP2-204ENST00000548823 TRMT6Q9UJA5 497 aaKnown RBP19.48■□□□□ 0.71
CTDSP2-204ENST00000548823 WASF2Q9Y6W5 498 aa19.48■□□□□ 0.71
CTDSP2-204ENST00000548823 LRRK1Q38SD2 2015 aa19.48■□□□□ 0.71
CTDSP2-204ENST00000548823 PIKFYVEQ9Y2I7 2098 aa19.47■□□□□ 0.71
CTDSP2-204ENST00000548823 PRAMEF33A0A0G2JMD5 474 aa19.47■□□□□ 0.71
CTDSP2-204ENST00000548823 H0YHG0 523 aa19.47■□□□□ 0.71
CTDSP2-204ENST00000548823 RAD51BO15315 384 aa19.47■□□□□ 0.71
CTDSP2-204ENST00000548823 SPINT1O43278 529 aa19.47■□□□□ 0.71
CTDSP2-204ENST00000548823 ZBTB14O43829 449 aa19.47■□□□□ 0.71
CTDSP2-204ENST00000548823 PRAMEF10O60809 474 aa19.47■□□□□ 0.71
CTDSP2-204ENST00000548823 KERAO60938 352 aa19.47■□□□□ 0.71
CTDSP2-204ENST00000548823 ANXA6P08133 673 aa19.47■□□□□ 0.71
CTDSP2-204ENST00000548823 IDH3AP50213 366 aa19.47■□□□□ 0.71
CTDSP2-204ENST00000548823 POLE2P56282 527 aa19.47■□□□□ 0.71
CTDSP2-204ENST00000548823 PRRT3Q5FWE3 981 aa19.47■□□□□ 0.71
CTDSP2-204ENST00000548823 KIAA1161Q6NSJ0 714 aa19.47■□□□□ 0.71
CTDSP2-204ENST00000548823 PAQR3Q6TCH7 311 aa19.47■□□□□ 0.71
CTDSP2-204ENST00000548823 MAVSQ7Z434 540 aa19.47■□□□□ 0.71
CTDSP2-204ENST00000548823 SERPINA9Q86WD7 417 aa19.47■□□□□ 0.71
CTDSP2-204ENST00000548823 RAVER1Q8IY67 606 aaKnown RBP19.47■□□□□ 0.71
CTDSP2-204ENST00000548823 STAG3L4Q8TBR4 150 aa19.47■□□□□ 0.71
CTDSP2-204ENST00000548823 PTERQ96BW5 349 aa19.47■□□□□ 0.71
CTDSP2-204ENST00000548823 KLHL29Q96CT2 875 aa19.47■□□□□ 0.71
CTDSP2-204ENST00000548823 NSL1Q96IY1 281 aa19.47■□□□□ 0.71
CTDSP2-204ENST00000548823 KLHL32Q96NJ5 620 aa19.47■□□□□ 0.71
CTDSP2-204ENST00000548823 TMEM237Q96Q45 408 aa19.47■□□□□ 0.71
CTDSP2-204ENST00000548823 ATOH8Q96SQ7 321 aa19.47■□□□□ 0.71
CTDSP2-204ENST00000548823 GPR21Q99679 349 aa19.47■□□□□ 0.71
CTDSP2-204ENST00000548823 SLC12A9Q9BXP2 914 aa19.47■□□□□ 0.71
CTDSP2-204ENST00000548823 LRMDAQ9H2I8 198 aa19.47■□□□□ 0.71
CTDSP2-204ENST00000548823 ALG9Q9H6U8 611 aa19.47■□□□□ 0.71
CTDSP2-204ENST00000548823 ASB8Q9H765 288 aa19.47■□□□□ 0.71
CTDSP2-204ENST00000548823 EML4Q9HC35 981 aaKnown RBP19.47■□□□□ 0.71
CTDSP2-204ENST00000548823 RAD18Q9NS91 495 aa19.47■□□□□ 0.71
CTDSP2-204ENST00000548823 PLEKHB1Q9UF11 243 aaPredicted RBP19.47■□□□□ 0.71
CTDSP2-204ENST00000548823 APOBEC3BQ9UH17 382 aaKnown RBP19.47■□□□□ 0.71
CTDSP2-204ENST00000548823 DHRS7Q9Y394 339 aa19.47■□□□□ 0.71
CTDSP2-204ENST00000548823 LOXL2Q9Y4K0 774 aa19.47■□□□□ 0.71
CTDSP2-204ENST00000548823 FPGTO14772 594 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms