RNA–Protein interactions for RNA: ENST00000548658.1

BEST3-209, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-209ENST00000548658 FLVCR1-AS1Q8TAF5 88 aa10.98□□□□□ -0.65
BEST3-209ENST00000548658 GABPB2Q8TAK5 448 aaPredicted RBP10.98□□□□□ -0.65
BEST3-209ENST00000548658 ZUFSPQ96AP4 578 aa10.98□□□□□ -0.65
BEST3-209ENST00000548658 MS4A14Q96JA4 679 aa10.98□□□□□ -0.65
BEST3-209ENST00000548658 BIRC8Q96P09 236 aa10.98□□□□□ -0.65
BEST3-209ENST00000548658 IP6K3Q96PC2 410 aa10.98□□□□□ -0.65
BEST3-209ENST00000548658 NRTNQ99748 197 aa10.98□□□□□ -0.65
BEST3-209ENST00000548658 NDC1Q9BTX1 674 aa10.98□□□□□ -0.65
BEST3-209ENST00000548658 CLMPQ9H6B4 373 aa10.98□□□□□ -0.65
BEST3-209ENST00000548658 FAM60AQ9NP50 221 aa10.98□□□□□ -0.65
BEST3-209ENST00000548658 ZNF71Q9NQZ8 489 aaPredicted RBP10.98□□□□□ -0.65
BEST3-209ENST00000548658 INTS10Q9NVR2 710 aaKnown RBP10.98□□□□□ -0.65
BEST3-209ENST00000548658 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.98□□□□□ -0.65
BEST3-209ENST00000548658 G3BP2Q9UN86 482 aaKnown RBP10.98□□□□□ -0.65
BEST3-209ENST00000548658 SPTBP11277 2137 aa10.97□□□□□ -0.65
BEST3-209ENST00000548658 GCN1Q92616 2671 aaKnown RBP10.97□□□□□ -0.65
BEST3-209ENST00000548658 TARM1B6A8C7 271 aa10.97□□□□□ -0.65
BEST3-209ENST00000548658 E5RI56 91 aa10.97□□□□□ -0.65
BEST3-209ENST00000548658 ZSCAN9O15535 394 aaPredicted RBP10.97□□□□□ -0.65
BEST3-209ENST00000548658 PHF2O75151 1096 aa10.97□□□□□ -0.65
BEST3-209ENST00000548658 AVILO75366 819 aa10.97□□□□□ -0.65
BEST3-209ENST00000548658 C1orf105O95561 183 aa10.97□□□□□ -0.65
BEST3-209ENST00000548658 FMO4P31512 558 aa10.97□□□□□ -0.65
BEST3-209ENST00000548658 CASRP41180 1078 aa10.97□□□□□ -0.65
BEST3-209ENST00000548658 ARSFP54793 590 aa10.97□□□□□ -0.65
BEST3-209ENST00000548658 RRADP55042 308 aa10.97□□□□□ -0.65
BEST3-209ENST00000548658 DCDP81605 110 aaKnown RBP10.97□□□□□ -0.65
BEST3-209ENST00000548658 NFKB2Q00653 900 aa10.97□□□□□ -0.65
BEST3-209ENST00000548658 KLRB1Q12918 225 aa10.97□□□□□ -0.65
BEST3-209ENST00000548658 THOC5Q13769 683 aaKnown RBP10.97□□□□□ -0.65
BEST3-209ENST00000548658 DHX34Q14147 1143 aaKnown RBP10.97□□□□□ -0.65
BEST3-209ENST00000548658 NAA25Q14CX7 972 aa10.97□□□□□ -0.65
BEST3-209ENST00000548658 NCF4Q15080 339 aa10.97□□□□□ -0.65
BEST3-209ENST00000548658 ANKRD20A4Q4UJ75 823 aa10.97□□□□□ -0.65
BEST3-209ENST00000548658 TCTE1Q5JU00 501 aa10.97□□□□□ -0.65
BEST3-209ENST00000548658 YOD1Q5VVQ6 348 aaPredicted RBP10.97□□□□□ -0.65
BEST3-209ENST00000548658 TTC27Q6P3X3 843 aa10.97□□□□□ -0.65
BEST3-209ENST00000548658 CES3Q6UWW8 571 aa10.97□□□□□ -0.65
BEST3-209ENST00000548658 TMEM135Q86UB9 458 aa10.97□□□□□ -0.65
BEST3-209ENST00000548658 TRIM73Q86UV7 250 aa10.97□□□□□ -0.65
BEST3-209ENST00000548658 CAND1Q86VP6 1230 aaKnown RBP10.97□□□□□ -0.65
BEST3-209ENST00000548658 PTRH1Q86Y79 214 aaKnown RBP10.97□□□□□ -0.65
BEST3-209ENST00000548658 CILP2Q8IUL8 1156 aa10.97□□□□□ -0.65
BEST3-209ENST00000548658 DNAJC22Q8N4W6 341 aa10.97□□□□□ -0.65
BEST3-209ENST00000548658 TMEM102Q8N9M5 508 aaPredicted RBP10.97□□□□□ -0.65
BEST3-209ENST00000548658 TEX19Q8NA77 164 aa10.97□□□□□ -0.65
BEST3-209ENST00000548658 HMGCLL1Q8TB92 370 aa10.97□□□□□ -0.65
BEST3-209ENST00000548658 LKAAEAR1Q8TD35 194 aa10.97□□□□□ -0.65
BEST3-209ENST00000548658 CALML6Q8TD86 181 aa10.97□□□□□ -0.65
BEST3-209ENST00000548658 LPGAT1Q92604 370 aa10.97□□□□□ -0.65
BEST3-209ENST00000548658 DLG3Q92796 817 aa10.97□□□□□ -0.65
BEST3-209ENST00000548658 OSBPL9Q96SU4 736 aa10.97□□□□□ -0.65
BEST3-209ENST00000548658 MENTQ9BUN1 341 aa10.97□□□□□ -0.65
BEST3-209ENST00000548658 CCDC68Q9H2F9 335 aa10.97□□□□□ -0.65
BEST3-209ENST00000548658 ACSS2Q9NR19 701 aa10.97□□□□□ -0.65
BEST3-209ENST00000548658 TXLNGQ9NUQ3 528 aa10.97□□□□□ -0.65
BEST3-209ENST00000548658 IRAK4Q9NWZ3 460 aa10.97□□□□□ -0.65
BEST3-209ENST00000548658 KLHL42Q9P2K6 505 aa10.97□□□□□ -0.65
BEST3-209ENST00000548658 GPN3Q9UHW5 284 aaPredicted RBP10.97□□□□□ -0.65
BEST3-209ENST00000548658 TLK1Q9UKI8 766 aa10.97□□□□□ -0.65
BEST3-209ENST00000548658 PLAGL1Q9UM63 463 aa10.97□□□□□ -0.65
BEST3-209ENST00000548658 CRYL1Q9Y2S2 319 aa10.97□□□□□ -0.65
BEST3-209ENST00000548658 TLN1Q9Y490 2541 aaKnown RBP10.97□□□□□ -0.65
BEST3-209ENST00000548658 CTAGE9A4FU28 777 aa10.96□□□□□ -0.65
BEST3-209ENST00000548658 GOLGA8KD6RF30 607 aa10.96□□□□□ -0.65
BEST3-209ENST00000548658 GOLGA8TH3BQL2 631 aa10.96□□□□□ -0.65
BEST3-209ENST00000548658 SRPX2O60687 465 aaPredicted RBP10.96□□□□□ -0.65
BEST3-209ENST00000548658 USP1O94782 785 aa10.96□□□□□ -0.65
BEST3-209ENST00000548658 MATN4O95460 622 aa10.96□□□□□ -0.65
BEST3-209ENST00000548658 IGHEP01854 428 aa10.96□□□□□ -0.65
BEST3-209ENST00000548658 PIM1P11309 404 aaPredicted RBP10.96□□□□□ -0.65
BEST3-209ENST00000548658 PKMP14618 531 aaKnown RBP10.96□□□□□ -0.65
BEST3-209ENST00000548658 TCP1P17987 556 aaKnown RBP10.96□□□□□ -0.65
BEST3-209ENST00000548658 MAGP20916 626 aa10.96□□□□□ -0.65
BEST3-209ENST00000548658 HSD17B2P37059 387 aa10.96□□□□□ -0.65
BEST3-209ENST00000548658 GABRA4P48169 554 aa10.96□□□□□ -0.65
BEST3-209ENST00000548658 TERF1P54274 439 aa10.96□□□□□ -0.65
BEST3-209ENST00000548658 RPS18P62269 152 aaKnown RBP10.96□□□□□ -0.65
BEST3-209ENST00000548658 TLE1Q04724 770 aa10.96□□□□□ -0.65
BEST3-209ENST00000548658 GRB7Q14451 532 aa10.96□□□□□ -0.65
BEST3-209ENST00000548658 SSPNQ14714 243 aa10.96□□□□□ -0.65
BEST3-209ENST00000548658 PPP1R7Q15435 360 aa10.96□□□□□ -0.65
BEST3-209ENST00000548658 ZIC1Q15915 447 aa10.96□□□□□ -0.65
BEST3-209ENST00000548658 PTCHD3Q3KNS1 767 aa10.96□□□□□ -0.65
BEST3-209ENST00000548658 TTLL9Q3SXZ7 439 aa10.96□□□□□ -0.65
BEST3-209ENST00000548658 CTSL3PQ5NE16 218 aa10.96□□□□□ -0.65
BEST3-209ENST00000548658 ASB18Q6ZVZ8 466 aa10.96□□□□□ -0.65
BEST3-209ENST00000548658 MED25Q71SY5 747 aa10.96□□□□□ -0.65
BEST3-209ENST00000548658 PCGF5Q86SE9 256 aa10.96□□□□□ -0.65
BEST3-209ENST00000548658 RAB43Q86YS6 212 aa10.96□□□□□ -0.65
BEST3-209ENST00000548658 MCATQ8IVS2 390 aaKnown RBP10.96□□□□□ -0.65
BEST3-209ENST00000548658 REXO1L1PQ8IX06 675 aa10.96□□□□□ -0.65
BEST3-209ENST00000548658 PPIL6Q8IXY8 311 aa10.96□□□□□ -0.65
BEST3-209ENST00000548658 SLC35F6Q8N357 371 aa10.96□□□□□ -0.65
BEST3-209ENST00000548658 ZBTB2Q8N680 514 aa10.96□□□□□ -0.65
BEST3-209ENST00000548658 LMNTD1Q8N9Z9 388 aa10.96□□□□□ -0.65
BEST3-209ENST00000548658 LINC01555Q8NAE3 123 aa10.96□□□□□ -0.65
BEST3-209ENST00000548658 ADAMTS17Q8TE56 1095 aa10.96□□□□□ -0.65
BEST3-209ENST00000548658 NACC2Q96BF6 587 aa10.96□□□□□ -0.65
BEST3-209ENST00000548658 ZNF669Q96BR6 464 aaPredicted RBP10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms