RNA–Protein interactions for RNA: ENST00000548277.1

TRAFD1-205, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-205ENST00000548277 POLG2Q9UHN1 485 aa11.49□□□□□ -0.57
TRAFD1-205ENST00000548277 EPN1Q9Y6I3 576 aaPredicted RBP11.49□□□□□ -0.57
TRAFD1-205ENST00000548277 MAU2Q9Y6X3 613 aa11.49□□□□□ -0.57
TRAFD1-205ENST00000548277 MYO9AB2RTY4 2548 aa11.49□□□□□ -0.57
TRAFD1-205ENST00000548277 CRYBG3Q68DQ2 2970 aa11.49□□□□□ -0.57
TRAFD1-205ENST00000548277 RCCD1A6NED2 376 aa11.48□□□□□ -0.57
TRAFD1-205ENST00000548277 SOWAHDA6NJG2 315 aa11.48□□□□□ -0.57
TRAFD1-205ENST00000548277 BHMG1C9JSJ3 638 aaPredicted RBP11.48□□□□□ -0.57
TRAFD1-205ENST00000548277 PRSS44E7EML9 344 aa11.48□□□□□ -0.57
TRAFD1-205ENST00000548277 SOCS6O14544 535 aa11.48□□□□□ -0.57
TRAFD1-205ENST00000548277 LIN7AO14910 233 aaPredicted RBP11.48□□□□□ -0.57
TRAFD1-205ENST00000548277 OR1I1O60431 355 aa11.48□□□□□ -0.57
TRAFD1-205ENST00000548277 METTL18O95568 372 aa11.48□□□□□ -0.57
TRAFD1-205ENST00000548277 ITGAXP20702 1163 aa11.48□□□□□ -0.57
TRAFD1-205ENST00000548277 OR1D4P47884 311 aa11.48□□□□□ -0.57
TRAFD1-205ENST00000548277 ZNF75DP51815 510 aa11.48□□□□□ -0.57
TRAFD1-205ENST00000548277 NAP1L1P55209 391 aaKnown RBP11.48□□□□□ -0.57
TRAFD1-205ENST00000548277 OVCH1Q7RTY7 1134 aa11.48□□□□□ -0.57
TRAFD1-205ENST00000548277 TMTC1Q8IUR5 882 aa11.48□□□□□ -0.57
TRAFD1-205ENST00000548277 OR5K2Q8NHB8 316 aa11.48□□□□□ -0.57
TRAFD1-205ENST00000548277 MAGEB10Q96LZ2 347 aaPredicted RBP11.48□□□□□ -0.57
TRAFD1-205ENST00000548277 SPATA13Q96N96 652 aa11.48□□□□□ -0.57
TRAFD1-205ENST00000548277 PHF12Q96QT6 1004 aa11.48□□□□□ -0.57
TRAFD1-205ENST00000548277 PANX2Q96RD6 677 aa11.48□□□□□ -0.57
TRAFD1-205ENST00000548277 BARD1Q99728 777 aaKnown RBP11.48□□□□□ -0.57
TRAFD1-205ENST00000548277 OSBPL8Q9BZF1 889 aa11.48□□□□□ -0.57
TRAFD1-205ENST00000548277 RBSNQ9H1K0 784 aa11.48□□□□□ -0.57
TRAFD1-205ENST00000548277 STOX2Q9P2F5 926 aaPredicted RBP11.48□□□□□ -0.57
TRAFD1-205ENST00000548277 DUSP10Q9Y6W6 482 aa11.48□□□□□ -0.57
TRAFD1-205ENST00000548277 UNC79Q9P2D8 2635 aa11.48□□□□□ -0.57
TRAFD1-205ENST00000548277 PCNX1Q96RV3 2341 aa11.47□□□□□ -0.57
TRAFD1-205ENST00000548277 SLC5A10A0PJK1 596 aa11.47□□□□□ -0.57
TRAFD1-205ENST00000548277 IQCF5A8MTL0 148 aa11.47□□□□□ -0.57
TRAFD1-205ENST00000548277 KLHL18O94889 574 aa11.47□□□□□ -0.57
TRAFD1-205ENST00000548277 AP2A1O95782 977 aa11.47□□□□□ -0.57
TRAFD1-205ENST00000548277 F10P00742 488 aa11.47□□□□□ -0.57
TRAFD1-205ENST00000548277 FTH1P02794 183 aa11.47□□□□□ -0.57
TRAFD1-205ENST00000548277 MMP11P24347 488 aa11.47□□□□□ -0.57
TRAFD1-205ENST00000548277 MSNP26038 577 aaKnown RBP11.47□□□□□ -0.57
TRAFD1-205ENST00000548277 NSG1P42857 185 aa11.47□□□□□ -0.57
TRAFD1-205ENST00000548277 SOX8P57073 446 aa11.47□□□□□ -0.57
TRAFD1-205ENST00000548277 Q0VFX4 171 aa11.47□□□□□ -0.57
TRAFD1-205ENST00000548277 NAA30Q147X3 362 aaPredicted RBP11.47□□□□□ -0.57
TRAFD1-205ENST00000548277 ZNF169Q14929 603 aaPredicted RBP11.47□□□□□ -0.57
TRAFD1-205ENST00000548277 ZRSR2Q15696 482 aaKnown RBP11.47□□□□□ -0.57
TRAFD1-205ENST00000548277 RBBP7Q16576 425 aa11.47□□□□□ -0.57
TRAFD1-205ENST00000548277 NKG7Q16617 165 aa11.47□□□□□ -0.57
TRAFD1-205ENST00000548277 SLC5A12Q1EHB4 618 aa11.47□□□□□ -0.57
TRAFD1-205ENST00000548277 KIRREL2Q6UWL6 708 aa11.47□□□□□ -0.57
TRAFD1-205ENST00000548277 ARHGEF18Q6ZSZ5 1173 aa11.47□□□□□ -0.57
TRAFD1-205ENST00000548277 TICAM1Q8IUC6 712 aa11.47□□□□□ -0.57
TRAFD1-205ENST00000548277 VRK3Q8IV63 474 aa11.47□□□□□ -0.57
TRAFD1-205ENST00000548277 OR1N1Q8NGS0 311 aa11.47□□□□□ -0.57
TRAFD1-205ENST00000548277 PPP4R1Q8TF05 950 aa11.47□□□□□ -0.57
TRAFD1-205ENST00000548277 STYXQ8WUJ0 223 aa11.47□□□□□ -0.57
TRAFD1-205ENST00000548277 FAR1Q8WVX9 515 aa11.47□□□□□ -0.57
TRAFD1-205ENST00000548277 DLG3Q92796 817 aa11.47□□□□□ -0.57
TRAFD1-205ENST00000548277 LRRC45Q96CN5 670 aa11.47□□□□□ -0.57
TRAFD1-205ENST00000548277 MRFAP1L1Q96HT8 127 aa11.47□□□□□ -0.57
TRAFD1-205ENST00000548277 EPS8L2Q9H6S3 715 aa11.47□□□□□ -0.57
TRAFD1-205ENST00000548277 ARNT2Q9HBZ2 717 aa11.47□□□□□ -0.57
TRAFD1-205ENST00000548277 CUTCQ9NTM9 273 aa11.47□□□□□ -0.57
TRAFD1-205ENST00000548277 PLA2G3Q9NZ20 509 aa11.47□□□□□ -0.57
TRAFD1-205ENST00000548277 OR6C2Q9NZP2 312 aa11.47□□□□□ -0.57
TRAFD1-205ENST00000548277 HS3ST3B1Q9Y662 390 aa11.47□□□□□ -0.57
TRAFD1-205ENST00000548277 A0A1B0GX78 115 aa11.46□□□□□ -0.57
TRAFD1-205ENST00000548277 CCDC162PA2VCL2 907 aa11.46□□□□□ -0.57
TRAFD1-205ENST00000548277 H7C0S8 307 aa11.46□□□□□ -0.57
TRAFD1-205ENST00000548277 E2F3O00716 465 aa11.46□□□□□ -0.57
TRAFD1-205ENST00000548277 PJA2O43164 708 aa11.46□□□□□ -0.57
TRAFD1-205ENST00000548277 HNRNPRO43390 633 aaKnown RBP11.46□□□□□ -0.57
TRAFD1-205ENST00000548277 AP2A2O94973 939 aa11.46□□□□□ -0.57
TRAFD1-205ENST00000548277 IPO7O95373 1038 aaKnown RBP11.46□□□□□ -0.57
TRAFD1-205ENST00000548277 PTMAP06454 111 aaKnown RBP11.46□□□□□ -0.57
TRAFD1-205ENST00000548277 SNRPB2P08579 225 aaKnown RBP11.46□□□□□ -0.57
TRAFD1-205ENST00000548277 OR56A5P0C7T3 313 aa11.46□□□□□ -0.57
TRAFD1-205ENST00000548277 PIM1P11309 404 aaPredicted RBP11.46□□□□□ -0.57
TRAFD1-205ENST00000548277 POU3F2P20265 443 aaPredicted RBP11.46□□□□□ -0.57
TRAFD1-205ENST00000548277 CTNNA1P35221 906 aaKnown RBP11.46□□□□□ -0.57
TRAFD1-205ENST00000548277 ARSFP54793 590 aa11.46□□□□□ -0.57
TRAFD1-205ENST00000548277 PER3P56645 1201 aa11.46□□□□□ -0.57
TRAFD1-205ENST00000548277 KCNK10P57789 538 aa11.46□□□□□ -0.57
TRAFD1-205ENST00000548277 VSX2P58304 361 aaPredicted RBP11.46□□□□□ -0.57
TRAFD1-205ENST00000548277 COPS2P61201 443 aa11.46□□□□□ -0.57
TRAFD1-205ENST00000548277 HSPA14Q0VDF9 509 aa11.46□□□□□ -0.57
TRAFD1-205ENST00000548277 GTF3C1Q12789 2109 aa11.46□□□□□ -0.57
TRAFD1-205ENST00000548277 KIR2DS3Q14952 304 aa11.46□□□□□ -0.57
TRAFD1-205ENST00000548277 SF1Q15637 639 aaKnown RBP11.46□□□□□ -0.57
TRAFD1-205ENST00000548277 TUBB8Q3ZCM7 444 aa11.46□□□□□ -0.57
TRAFD1-205ENST00000548277 FCRL6Q6DN72 434 aa11.46□□□□□ -0.57
TRAFD1-205ENST00000548277 FIGLAQ6QHK4 219 aa11.46□□□□□ -0.57
TRAFD1-205ENST00000548277 RAD9BQ6WBX8 426 aa11.46□□□□□ -0.57
TRAFD1-205ENST00000548277 COX15Q7KZN9 410 aa11.46□□□□□ -0.57
TRAFD1-205ENST00000548277 FAM71DQ8N9W8 422 aa11.46□□□□□ -0.57
TRAFD1-205ENST00000548277 LINC01555Q8NAE3 123 aa11.46□□□□□ -0.57
TRAFD1-205ENST00000548277 YIPF2Q9BWQ6 316 aa11.46□□□□□ -0.57
TRAFD1-205ENST00000548277 LHPPQ9H008 270 aa11.46□□□□□ -0.57
TRAFD1-205ENST00000548277 CTSFQ9UBX1 484 aa11.46□□□□□ -0.57
TRAFD1-205ENST00000548277 REXO2Q9Y3B8 237 aaKnown RBP11.46□□□□□ -0.57
TRAFD1-205ENST00000548277 PCDHA3Q9Y5H8 950 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms