RNA–Protein interactions for RNA: ENST00000548211.1

RPAP3-205, Transcript of RNA polymerase II associated protein 3, human

TSL 2

Gene RPAP3, Length 555 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPAP3-205	ENST00000548211	PXMP2	Q9NR77	195 aa		3.4	□□□□□ -1.87
RPAP3-205	ENST00000548211	SETD4	Q9NVD3	440 aa		3.4	□□□□□ -1.87
RPAP3-205	ENST00000548211	FAM118A	Q9NWS6	357 aa		3.4	□□□□□ -1.87
RPAP3-205	ENST00000548211	ERAP1	Q9NZ08	941 aa		3.4	□□□□□ -1.87
RPAP3-205	ENST00000548211	SPG21	Q9NZD8	308 aa		3.4	□□□□□ -1.87
RPAP3-205	ENST00000548211	IL1RAPL1	Q9NZN1	696 aa		3.4	□□□□□ -1.87
RPAP3-205	ENST00000548211	KIAA1456	Q9P272	454 aa		3.4	□□□□□ -1.87
RPAP3-205	ENST00000548211	TUBE1	Q9UJT0	475 aa		3.4	□□□□□ -1.87
RPAP3-205	ENST00000548211	FBXO2	Q9UK22	296 aa	Predicted RBP	3.4	□□□□□ -1.87
RPAP3-205	ENST00000548211	ZFP37	Q9Y6Q3	630 aa	Predicted RBP	3.4	□□□□□ -1.87
RPAP3-205	ENST00000548211	PATJ	Q8NI35	1801 aa		3.4	□□□□□ -1.87
RPAP3-205	ENST00000548211	GREB1	Q4ZG55	1949 aa		3.39	□□□□□ -1.87
RPAP3-205	ENST00000548211	KANSL1L	A0AUZ9	987 aa		3.39	□□□□□ -1.87
RPAP3-205	ENST00000548211	TMEM202	A6NGA9	273 aa		3.39	□□□□□ -1.87
RPAP3-205	ENST00000548211	RRN3P2	A6NIE6	340 aa		3.39	□□□□□ -1.87
RPAP3-205	ENST00000548211	HIDE1	A8MVS5	230 aa		3.39	□□□□□ -1.87
RPAP3-205	ENST00000548211	SMIM1	B2RUZ4	78 aa		3.39	□□□□□ -1.87
RPAP3-205	ENST00000548211	BLOC1S5-TXNDC5	H3BN57	136 aa		3.39	□□□□□ -1.87
RPAP3-205	ENST00000548211	GPAA1	O43292	621 aa		3.39	□□□□□ -1.87
RPAP3-205	ENST00000548211	EPB41L2	O43491	1005 aa	Known RBP	3.39	□□□□□ -1.87
RPAP3-205	ENST00000548211	PIP5K1C	O60331	668 aa		3.39	□□□□□ -1.87
RPAP3-205	ENST00000548211	RANBP6	O60518	1105 aa	Known RBP	3.39	□□□□□ -1.87
RPAP3-205	ENST00000548211	WDR1	O75083	606 aa		3.39	□□□□□ -1.87
RPAP3-205	ENST00000548211	CXCL14	O95715	111 aa		3.39	□□□□□ -1.87
RPAP3-205	ENST00000548211	MAOA	P21397	527 aa		3.39	□□□□□ -1.87
RPAP3-205	ENST00000548211	UBA1	P22314	1058 aa	Known RBP	3.39	□□□□□ -1.87
RPAP3-205	ENST00000548211	BDKRB2	P30411	391 aa		3.39	□□□□□ -1.87
RPAP3-205	ENST00000548211	CD52	P31358	61 aa		3.39	□□□□□ -1.87
RPAP3-205	ENST00000548211	STARD6	P59095	220 aa		3.39	□□□□□ -1.87
RPAP3-205	ENST00000548211	MGAT3	Q09327	533 aa		3.39	□□□□□ -1.87
RPAP3-205	ENST00000548211	PPFIA1	Q13136	1202 aa		3.39	□□□□□ -1.87
RPAP3-205	ENST00000548211	SIM2	Q14190	667 aa	Predicted RBP	3.39	□□□□□ -1.87
RPAP3-205	ENST00000548211	VEPH1	Q14D04	833 aa		3.39	□□□□□ -1.87
RPAP3-205	ENST00000548211	TAF11	Q15544	211 aa		3.39	□□□□□ -1.87
RPAP3-205	ENST00000548211	N4BP2L1	Q5TBK1	243 aa	Predicted RBP	3.39	□□□□□ -1.87
RPAP3-205	ENST00000548211	FAM171B	Q6P995	826 aa		3.39	□□□□□ -1.87
RPAP3-205	ENST00000548211	SLC27A1	Q6PCB7	646 aa		3.39	□□□□□ -1.87
RPAP3-205	ENST00000548211	SPATA6L	Q8N4H0	392 aa		3.39	□□□□□ -1.87
RPAP3-205	ENST00000548211	ZCCHC9	Q8N567	271 aa	Known RBP	3.39	□□□□□ -1.87
RPAP3-205	ENST00000548211	ZBTB2	Q8N680	514 aa		3.39	□□□□□ -1.87
RPAP3-205	ENST00000548211	LSM14A	Q8ND56	463 aa	Known RBP	3.39	□□□□□ -1.87
RPAP3-205	ENST00000548211	PPHLN1	Q8NEY8	458 aa	Known RBP	3.39	□□□□□ -1.87
RPAP3-205	ENST00000548211	BEST2	Q8NFU1	509 aa		3.39	□□□□□ -1.87
RPAP3-205	ENST00000548211	DNAJB3	Q8WWF6	145 aa		3.39	□□□□□ -1.87
RPAP3-205	ENST00000548211	TRIM63	Q969Q1	353 aa		3.39	□□□□□ -1.87
RPAP3-205	ENST00000548211	MPP4	Q96JB8	637 aa		3.39	□□□□□ -1.87
RPAP3-205	ENST00000548211	CDHR1	Q96JP9	859 aa		3.39	□□□□□ -1.87
RPAP3-205	ENST00000548211	TAAR1	Q96RJ0	339 aa		3.39	□□□□□ -1.87
RPAP3-205	ENST00000548211	ATOH8	Q96SQ7	321 aa		3.39	□□□□□ -1.87
RPAP3-205	ENST00000548211	DCTN5	Q9BTE1	182 aa		3.39	□□□□□ -1.87
RPAP3-205	ENST00000548211	MRPL9	Q9BYD2	267 aa	Known RBP	3.39	□□□□□ -1.87
RPAP3-205	ENST00000548211	TMEM117	Q9H0C3	514 aa		3.39	□□□□□ -1.87
RPAP3-205	ENST00000548211	BOLA2	Q9H3K6	86 aa		3.39	□□□□□ -1.87
RPAP3-205	ENST00000548211	SMARCAD1	Q9H4L7	1026 aa		3.39	□□□□□ -1.87
RPAP3-205	ENST00000548211	IL1RAPL2	Q9NP60	686 aa		3.39	□□□□□ -1.87
RPAP3-205	ENST00000548211	TMEM161A	Q9NX61	479 aa		3.39	□□□□□ -1.87
RPAP3-205	ENST00000548211	DLGAP2	Q9P1A6	1054 aa		3.39	□□□□□ -1.87
RPAP3-205	ENST00000548211	EPS15L1	Q9UBC2	864 aa		3.39	□□□□□ -1.87
RPAP3-205	ENST00000548211	PADI3	Q9ULW8	664 aa		3.39	□□□□□ -1.87
RPAP3-205	ENST00000548211	DLGAP4	Q9Y2H0	992 aa		3.39	□□□□□ -1.87
RPAP3-205	ENST00000548211	LOXL2	Q9Y4K0	774 aa		3.39	□□□□□ -1.87
RPAP3-205	ENST00000548211	TRPV2	Q9Y5S1	764 aa		3.39	□□□□□ -1.87
RPAP3-205	ENST00000548211	C2orf16	Q68DN1	1984 aa		3.39	□□□□□ -1.87
RPAP3-205	ENST00000548211	IGSF9B	Q9UPX0	1349 aa		3.39	□□□□□ -1.87
RPAP3-205	ENST00000548211	KDM3A	Q9Y4C1	1321 aa		3.39	□□□□□ -1.87
RPAP3-205	ENST00000548211	SPAG17	Q6Q759	2223 aa		3.39	□□□□□ -1.87
RPAP3-205	ENST00000548211	DOCK8	Q8NF50	2099 aa		3.39	□□□□□ -1.87
RPAP3-205	ENST00000548211	MBLAC1	A4D2B0	266 aa	Predicted RBP	3.38	□□□□□ -1.87
RPAP3-205	ENST00000548211	CTAGE9	A4FU28	777 aa		3.38	□□□□□ -1.87
RPAP3-205	ENST00000548211	RNF113A	O15541	343 aa	Known RBP	3.38	□□□□□ -1.87
RPAP3-205	ENST00000548211	FIBP	O43427	364 aa		3.38	□□□□□ -1.87
RPAP3-205	ENST00000548211	RPS6KA5	O75582	802 aa		3.38	□□□□□ -1.87
RPAP3-205	ENST00000548211	RNASEH2A	O75792	299 aa	Known RBP	3.38	□□□□□ -1.87
RPAP3-205	ENST00000548211	INHBA	P08476	426 aa		3.38	□□□□□ -1.87
RPAP3-205	ENST00000548211	CNP	P09543	421 aa	Known RBP	3.38	□□□□□ -1.87
RPAP3-205	ENST00000548211	CTAGE8	P0CG41	777 aa		3.38	□□□□□ -1.87
RPAP3-205	ENST00000548211	PDHB	P11177	359 aa		3.38	□□□□□ -1.87
RPAP3-205	ENST00000548211	PC	P11498	1178 aa	Known RBP	3.38	□□□□□ -1.87
RPAP3-205	ENST00000548211	CHRNB4	P30926	498 aa		3.38	□□□□□ -1.87
RPAP3-205	ENST00000548211	RDX	P35241	583 aa	Known RBP	3.38	□□□□□ -1.87
RPAP3-205	ENST00000548211	RPS9	P46781	194 aa	Known RBP	3.38	□□□□□ -1.87
RPAP3-205	ENST00000548211	NOV	P48745	357 aa		3.38	□□□□□ -1.87
RPAP3-205	ENST00000548211	GEMIN4	P57678	1058 aa	Known RBP	3.38	□□□□□ -1.87
RPAP3-205	ENST00000548211	LMO4	P61968	165 aa		3.38	□□□□□ -1.87
RPAP3-205	ENST00000548211	TBL3	Q12788	808 aa	Known RBP	3.38	□□□□□ -1.87
RPAP3-205	ENST00000548211	CDC37	Q16543	378 aa	Predicted RBP	3.38	□□□□□ -1.87
RPAP3-205	ENST00000548211	CCDC184	Q52MB2	194 aa		3.38	□□□□□ -1.87
RPAP3-205	ENST00000548211	WDR38	Q5JTN6	314 aa		3.38	□□□□□ -1.87
RPAP3-205	ENST00000548211	KCTD18	Q6PI47	426 aa	Predicted RBP	3.38	□□□□□ -1.87
RPAP3-205	ENST00000548211	STOX1	Q6ZVD7	989 aa		3.38	□□□□□ -1.87
RPAP3-205	ENST00000548211	LINGO2	Q7L985	606 aa		3.38	□□□□□ -1.87
RPAP3-205	ENST00000548211	ADGRG6	Q86SQ4	1221 aa		3.38	□□□□□ -1.87
RPAP3-205	ENST00000548211	TADA2B	Q86TJ2	420 aa		3.38	□□□□□ -1.87
RPAP3-205	ENST00000548211	CTAGE4	Q8IX94	777 aa		3.38	□□□□□ -1.87
RPAP3-205	ENST00000548211	TRIM58	Q8NG06	486 aa		3.38	□□□□□ -1.87
RPAP3-205	ENST00000548211	TRAPPC12	Q8WVT3	735 aa		3.38	□□□□□ -1.87
RPAP3-205	ENST00000548211	FRAT1	Q92837	279 aa	Predicted RBP	3.38	□□□□□ -1.87
RPAP3-205	ENST00000548211	SKA1	Q96BD8	255 aa		3.38	□□□□□ -1.87
RPAP3-205	ENST00000548211	ELP4	Q96EB1	424 aa		3.38	□□□□□ -1.87
RPAP3-205	ENST00000548211	TMEM47	Q9BQJ4	181 aa		3.38	□□□□□ -1.87

Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms