RNA–Protein interactions for RNA: ENST00000543727.5

TSFM-208, Transcript of Ts translation elongation factor, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene TSFM, Length 651 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSFM-208ENST00000543727 TSPAN17Q96FV3 270 aa17.3■□□□□ 0.36
TSFM-208ENST00000543727 ELMO2Q96JJ3 720 aa17.3■□□□□ 0.36
TSFM-208ENST00000543727 RBBP8Q99708 897 aa17.3■□□□□ 0.36
TSFM-208ENST00000543727 FANCEQ9HB96 536 aa17.3■□□□□ 0.36
TSFM-208ENST00000543727 PDE7BQ9NP56 450 aa17.3■□□□□ 0.36
TSFM-208ENST00000543727 SMYD2Q9NRG4 433 aa17.3■□□□□ 0.36
TSFM-208ENST00000543727 SDK2Q58EX2 2172 aa17.3■□□□□ 0.36
TSFM-208ENST00000543727 A0A0J9YY10 115 aa17.29■□□□□ 0.36
TSFM-208ENST00000543727 C9orf172C9J069 976 aa17.29■□□□□ 0.36
TSFM-208ENST00000543727 STMND1H3BQB6 276 aa17.29■□□□□ 0.36
TSFM-208ENST00000543727 TLX3O43711 291 aaPredicted RBP17.29■□□□□ 0.36
TSFM-208ENST00000543727 PRAMEF10O60809 474 aa17.29■□□□□ 0.36
TSFM-208ENST00000543727 UGT2B7P16662 529 aa17.29■□□□□ 0.36
TSFM-208ENST00000543727 ZNF37AP17032 561 aaPredicted RBP17.29■□□□□ 0.36
TSFM-208ENST00000543727 CYP2A7P20853 494 aa17.29■□□□□ 0.36
TSFM-208ENST00000543727 SPRP35270 261 aaPredicted RBP17.29■□□□□ 0.36
TSFM-208ENST00000543727 BDKRB1P46663 353 aa17.29■□□□□ 0.36
TSFM-208ENST00000543727 SEPHS1P49903 392 aa17.29■□□□□ 0.36
TSFM-208ENST00000543727 KBTBD12Q3ZCT8 623 aa17.29■□□□□ 0.36
TSFM-208ENST00000543727 CYHR1Q6ZMK1 362 aa17.29■□□□□ 0.36
TSFM-208ENST00000543727 LRRC69Q6ZNQ3 347 aa17.29■□□□□ 0.36
TSFM-208ENST00000543727 NKAPQ8N5F7 415 aaKnown RBP17.29■□□□□ 0.36
TSFM-208ENST00000543727 LINC01555Q8NAE3 123 aa17.29■□□□□ 0.36
TSFM-208ENST00000543727 FBF1Q8TES7 1133 aa17.29■□□□□ 0.36
TSFM-208ENST00000543727 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.29■□□□□ 0.36
TSFM-208ENST00000543727 OR2A14Q96R47 310 aa17.29■□□□□ 0.36
TSFM-208ENST00000543727 CYTH2Q99418 400 aa17.29■□□□□ 0.36
TSFM-208ENST00000543727 GPR22Q99680 433 aa17.29■□□□□ 0.36
TSFM-208ENST00000543727 SLC12A9Q9BXP2 914 aa17.29■□□□□ 0.36
TSFM-208ENST00000543727 INTS7Q9NVH2 962 aaKnown RBP17.29■□□□□ 0.36
TSFM-208ENST00000543727 SOHLH2Q9NX45 425 aa17.29■□□□□ 0.36
TSFM-208ENST00000543727 RUVBL2Q9Y230 463 aaKnown RBP17.29■□□□□ 0.36
TSFM-208ENST00000543727 ANKRD11Q6UB99 2663 aaPredicted RBP17.28■□□□□ 0.36
TSFM-208ENST00000543727 CXorf49A8MYA2 514 aaPredicted RBP17.28■□□□□ 0.36
TSFM-208ENST00000543727 ISM1B1AKI9 464 aa17.28■□□□□ 0.36
TSFM-208ENST00000543727 TAF4O00268 1085 aa17.28■□□□□ 0.36
TSFM-208ENST00000543727 LIPCP11150 499 aa17.28■□□□□ 0.36
TSFM-208ENST00000543727 FGF5P12034 268 aa17.28■□□□□ 0.36
TSFM-208ENST00000543727 SLC12A2P55011 1212 aa17.28■□□□□ 0.36
TSFM-208ENST00000543727 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.28■□□□□ 0.36
TSFM-208ENST00000543727 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.28■□□□□ 0.36
TSFM-208ENST00000543727 CCDC91Q7Z6B0 441 aa17.28■□□□□ 0.36
TSFM-208ENST00000543727 CTAGE3PQ8IX95 158 aa17.28■□□□□ 0.36
TSFM-208ENST00000543727 FLVCR1-AS1Q8TAF5 88 aa17.28■□□□□ 0.36
TSFM-208ENST00000543727 MCOLN3Q8TDD5 553 aa17.28■□□□□ 0.36
TSFM-208ENST00000543727 EEF1AKMT1Q8WVE0 214 aa17.28■□□□□ 0.36
TSFM-208ENST00000543727 KCNE4Q8WWG9 221 aa17.28■□□□□ 0.36
TSFM-208ENST00000543727 LINGO1Q96FE5 620 aa17.28■□□□□ 0.36
TSFM-208ENST00000543727 TCTN2Q96GX1 697 aa17.28■□□□□ 0.36
TSFM-208ENST00000543727 OLFM1Q99784 485 aa17.28■□□□□ 0.36
TSFM-208ENST00000543727 CDC42EP4Q9H3Q1 356 aaKnown RBP17.28■□□□□ 0.36
TSFM-208ENST00000543727 ACSS3Q9H6R3 686 aa17.28■□□□□ 0.36
TSFM-208ENST00000543727 PARVBQ9HBI1 364 aa17.28■□□□□ 0.36
TSFM-208ENST00000543727 PLAGL1Q9UM63 463 aa17.28■□□□□ 0.36
TSFM-208ENST00000543727 RAXQ9Y2V3 346 aa17.28■□□□□ 0.36
TSFM-208ENST00000543727 B3GALT1Q9Y5Z6 326 aa17.28■□□□□ 0.36
TSFM-208ENST00000543727 ANKRD12Q6UB98 2062 aa17.28■□□□□ 0.36
TSFM-208ENST00000543727 URB1O60287 2271 aaKnown RBP17.27■□□□□ 0.36
TSFM-208ENST00000543727 PABPN1LA6NDY0 278 aaKnown RBP17.27■□□□□ 0.36
TSFM-208ENST00000543727 SRRM3A6NNA2 597 aaPredicted RBP17.27■□□□□ 0.36
TSFM-208ENST00000543727 TSPAN12O95859 305 aa17.27■□□□□ 0.36
TSFM-208ENST00000543727 ENO2P09104 434 aaPredicted RBP17.27■□□□□ 0.36
TSFM-208ENST00000543727 RHOXF2BP0C7M4 288 aa17.27■□□□□ 0.36
TSFM-208ENST00000543727 OAS2P29728 719 aaKnown RBP17.27■□□□□ 0.36
TSFM-208ENST00000543727 ABCG1P45844 678 aa17.27■□□□□ 0.36
TSFM-208ENST00000543727 AP1S2P56377 157 aa17.27■□□□□ 0.36
TSFM-208ENST00000543727 FOXM1Q08050 763 aa17.27■□□□□ 0.36
TSFM-208ENST00000543727 TUBB3Q13509 450 aa17.27■□□□□ 0.36
TSFM-208ENST00000543727 MAP7Q14244 749 aa17.27■□□□□ 0.36
TSFM-208ENST00000543727 UBE2R2Q712K3 238 aaPredicted RBP17.27■□□□□ 0.36
TSFM-208ENST00000543727 PIWIL4Q7Z3Z4 852 aaKnown RBP17.27■□□□□ 0.36
TSFM-208ENST00000543727 PPP1R3BQ86XI6 285 aa17.27■□□□□ 0.36
TSFM-208ENST00000543727 PPM1NQ8N819 430 aa17.27■□□□□ 0.36
TSFM-208ENST00000543727 DENND1AQ8TEH3 1009 aa17.27■□□□□ 0.36
TSFM-208ENST00000543727 SMPDL3AQ92484 453 aa17.27■□□□□ 0.36
TSFM-208ENST00000543727 TRAPPC9Q96Q05 1148 aa17.27■□□□□ 0.36
TSFM-208ENST00000543727 OR6C1Q96RD1 312 aa17.27■□□□□ 0.36
TSFM-208ENST00000543727 RHOXF2Q9BQY4 288 aa17.27■□□□□ 0.36
TSFM-208ENST00000543727 TRIM54Q9BYV2 358 aa17.27■□□□□ 0.36
TSFM-208ENST00000543727 FGF21Q9NSA1 209 aa17.27■□□□□ 0.36
TSFM-208ENST00000543727 SPHK1Q9NYA1 384 aa17.27■□□□□ 0.36
TSFM-208ENST00000543727 NINJ2Q9NZG7 142 aa17.27■□□□□ 0.36
TSFM-208ENST00000543727 FOXJ2Q9P0K8 574 aa17.27■□□□□ 0.36
TSFM-208ENST00000543727 RARRES3Q9UL19 164 aa17.27■□□□□ 0.36
TSFM-208ENST00000543727 NFU1Q9UMS0 254 aa17.27■□□□□ 0.36
TSFM-208ENST00000543727 NOVA2Q9UNW9 492 aaKnown RBP17.27■□□□□ 0.36
TSFM-208ENST00000543727 TMEM184BQ9Y519 407 aaPredicted RBP17.27■□□□□ 0.36
TSFM-208ENST00000543727 KLK4Q9Y5K2 254 aa17.27■□□□□ 0.36
TSFM-208ENST00000543727 USP24Q9UPU5 2620 aa17.27■□□□□ 0.35
TSFM-208ENST00000543727 DMXL2Q8TDJ6 3036 aa17.26■□□□□ 0.35
TSFM-208ENST00000543727 SLC9B1P1A6NJY1 282 aa17.26■□□□□ 0.35
TSFM-208ENST00000543727 PRICKLE3O43900 615 aaPredicted RBP17.26■□□□□ 0.35
TSFM-208ENST00000543727 ABHD2P08910 425 aa17.26■□□□□ 0.35
TSFM-208ENST00000543727 HIST1H2AGP0C0S8 130 aaPredicted RBP17.26■□□□□ 0.35
TSFM-208ENST00000543727 ST6GAL1P15907 406 aa17.26■□□□□ 0.35
TSFM-208ENST00000543727 HIST1H2ADP20671 130 aa17.26■□□□□ 0.35
TSFM-208ENST00000543727 TNFRSF8P28908 595 aa17.26■□□□□ 0.35
TSFM-208ENST00000543727 PEBP1P30086 187 aaKnown RBP17.26■□□□□ 0.35
TSFM-208ENST00000543727 PNLIPRP1P54315 467 aa17.26■□□□□ 0.35
TSFM-208ENST00000543727 UCNP55089 124 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms