RNA–Protein interactions for RNA: ENST00000543710.5

VPS13D-211, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 5,676 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-211ENST00000543710 FNBP1LQ5T0N5 605 aa7.67□□□□□ -1.18
VPS13D-211ENST00000543710 ANKRD22Q5VYY1 191 aa7.67□□□□□ -1.18
VPS13D-211ENST00000543710 MEIOBQ8N635 442 aa7.67□□□□□ -1.18
VPS13D-211ENST00000543710 AKAP1Q92667 903 aaKnown RBP eCLIP7.67□□□□□ -1.18
VPS13D-211ENST00000543710 PNPLA2Q96AD5 504 aa7.67□□□□□ -1.18
VPS13D-211ENST00000543710 GFM1Q96RP9 751 aaKnown RBP7.67□□□□□ -1.18
VPS13D-211ENST00000543710 PDZD7Q9H5P4 517 aa7.67□□□□□ -1.18
VPS13D-211ENST00000543710 B3GAT2Q9NPZ5 323 aa7.67□□□□□ -1.18
VPS13D-211ENST00000543710 C1orf109Q9NX04 203 aa7.67□□□□□ -1.18
VPS13D-211ENST00000543710 ARMCX1Q9P291 453 aa7.67□□□□□ -1.18
VPS13D-211ENST00000543710 KLHL21Q9UJP4 597 aa7.67□□□□□ -1.18
VPS13D-211ENST00000543710 COLQQ9Y215 455 aaPredicted RBP7.67□□□□□ -1.18
VPS13D-211ENST00000543710 PHYHO14832 338 aa7.66□□□□□ -1.18
VPS13D-211ENST00000543710 PAGE1O75459 146 aa7.66□□□□□ -1.18
VPS13D-211ENST00000543710 NOL4O94818 638 aa7.66□□□□□ -1.18
VPS13D-211ENST00000543710 GJB5O95377 273 aa7.66□□□□□ -1.18
VPS13D-211ENST00000543710 RENP00797 406 aa7.66□□□□□ -1.18
VPS13D-211ENST00000543710 IL3P08700 152 aa7.66□□□□□ -1.18
VPS13D-211ENST00000543710 HSD3B1P14060 373 aa7.66□□□□□ -1.18
VPS13D-211ENST00000543710 GOT1P17174 413 aa7.66□□□□□ -1.18
VPS13D-211ENST00000543710 TACR2P21452 398 aa7.66□□□□□ -1.18
VPS13D-211ENST00000543710 HSD3B2P26439 372 aa7.66□□□□□ -1.18
VPS13D-211ENST00000543710 ACSL1P33121 698 aa7.66□□□□□ -1.18
VPS13D-211ENST00000543710 KCNJ2P63252 427 aa7.66□□□□□ -1.18
VPS13D-211ENST00000543710 ZNF45Q02386 682 aa7.66□□□□□ -1.18
VPS13D-211ENST00000543710 DUOXA1Q1HG43 343 aa7.66□□□□□ -1.18
VPS13D-211ENST00000543710 SWI5Q1ZZU3 235 aa7.66□□□□□ -1.18
VPS13D-211ENST00000543710 PLEKHN1Q494U1 663 aaPredicted RBP7.66□□□□□ -1.18
VPS13D-211ENST00000543710 GPR107Q5VW38 600 aa7.66□□□□□ -1.18
VPS13D-211ENST00000543710 TAPT1Q6NXT6 567 aa7.66□□□□□ -1.18
VPS13D-211ENST00000543710 TMEM17Q86X19 198 aa7.66□□□□□ -1.18
VPS13D-211ENST00000543710 TRAPPC5Q8IUR0 188 aa7.66□□□□□ -1.18
VPS13D-211ENST00000543710 HID1Q8IV36 788 aa7.66□□□□□ -1.18
VPS13D-211ENST00000543710 STON2Q8WXE9 905 aa7.66□□□□□ -1.18
VPS13D-211ENST00000543710 NODALQ96S42 347 aa7.66□□□□□ -1.18
VPS13D-211ENST00000543710 MIPEPQ99797 713 aa7.66□□□□□ -1.18
VPS13D-211ENST00000543710 KXD1Q9BQD3 176 aa7.66□□□□□ -1.18
VPS13D-211ENST00000543710 DGCR6LQ9BY27 220 aa7.66□□□□□ -1.18
VPS13D-211ENST00000543710 DERL2Q9GZP9 239 aa7.66□□□□□ -1.18
VPS13D-211ENST00000543710 FAM120CQ9NX05 1096 aaKnown RBP7.66□□□□□ -1.18
VPS13D-211ENST00000543710 NUFIP1Q9UHK0 495 aaKnown RBP7.66□□□□□ -1.18
VPS13D-211ENST00000543710 COQ6Q9Y2Z9 468 aa7.66□□□□□ -1.18
VPS13D-211ENST00000543710 ASB4Q9Y574 426 aa7.66□□□□□ -1.18
VPS13D-211ENST00000543710 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.66□□□□□ -1.18
VPS13D-211ENST00000543710 A0A1W2PRG6 482 aa7.66□□□□□ -1.18
VPS13D-211ENST00000543710 PDPK1O15530 556 aa7.66□□□□□ -1.18
VPS13D-211ENST00000543710 GPR37L1O60883 481 aa7.66□□□□□ -1.18
VPS13D-211ENST00000543710 NADKO95544 446 aaPredicted RBP7.66□□□□□ -1.18
VPS13D-211ENST00000543710 EPORP19235 508 aa7.66□□□□□ -1.18
VPS13D-211ENST00000543710 CCT3P49368 545 aaKnown RBP7.66□□□□□ -1.18
VPS13D-211ENST00000543710 NUBP1P53384 320 aa7.66□□□□□ -1.18
VPS13D-211ENST00000543710 AP1S2P56377 157 aa7.66□□□□□ -1.18
VPS13D-211ENST00000543710 HEPACAMQ14CZ8 416 aa7.66□□□□□ -1.18
VPS13D-211ENST00000543710 PON3Q15166 354 aa7.66□□□□□ -1.18
VPS13D-211ENST00000543710 MOGQ16653 247 aa7.66□□□□□ -1.18
VPS13D-211ENST00000543710 KCTD21Q4G0X4 260 aa7.66□□□□□ -1.18
VPS13D-211ENST00000543710 RAP1GAP2Q684P5 730 aa7.66□□□□□ -1.18
VPS13D-211ENST00000543710 CDCA2Q69YH5 1023 aaPredicted RBP7.66□□□□□ -1.18
VPS13D-211ENST00000543710 SPESP1Q6UW49 350 aa7.66□□□□□ -1.18
VPS13D-211ENST00000543710 GCNT7Q6ZNI0 430 aa7.66□□□□□ -1.18
VPS13D-211ENST00000543710 HIST2H2ABQ8IUE6 130 aaPredicted RBP7.66□□□□□ -1.18
VPS13D-211ENST00000543710 IZUMO1Q8IYV9 350 aa7.66□□□□□ -1.18
VPS13D-211ENST00000543710 SMYD1Q8NB12 490 aa7.66□□□□□ -1.18
VPS13D-211ENST00000543710 OR8J3Q8NGG0 315 aa7.66□□□□□ -1.18
VPS13D-211ENST00000543710 OR10Q1Q8NGQ4 319 aa7.66□□□□□ -1.18
VPS13D-211ENST00000543710 FAM174AQ8TBP5 190 aa7.66□□□□□ -1.18
VPS13D-211ENST00000543710 GNPDA2Q8TDQ7 276 aa7.66□□□□□ -1.18
VPS13D-211ENST00000543710 TRIB2Q92519 343 aa7.66□□□□□ -1.18
VPS13D-211ENST00000543710 ITPKCQ96DU7 683 aa7.66□□□□□ -1.18
VPS13D-211ENST00000543710 TRIM2Q9C040 744 aa7.66□□□□□ -1.18
VPS13D-211ENST00000543710 POLD4Q9HCU8 107 aa7.66□□□□□ -1.18
VPS13D-211ENST00000543710 TM9SF3Q9HD45 589 aa7.66□□□□□ -1.18
VPS13D-211ENST00000543710 B4GALT7Q9UBV7 327 aa7.66□□□□□ -1.18
VPS13D-211ENST00000543710 SCML1Q9UN30 329 aa7.66□□□□□ -1.18
VPS13D-211ENST00000543710 SPIN1Q9Y657 262 aaPredicted RBP7.66□□□□□ -1.18
VPS13D-211ENST00000543710 C5P01031 1676 aa7.66□□□□□ -1.18
VPS13D-211ENST00000543710 NRXN3Q9Y4C0 1643 aa7.66□□□□□ -1.18
VPS13D-211ENST00000543710 BLACEA4D250 179 aa7.66□□□□□ -1.18
VPS13D-211ENST00000543710 ZNF701M0R085 212 aaPredicted RBP7.66□□□□□ -1.18
VPS13D-211ENST00000543710 XKRYO14609 159 aa7.66□□□□□ -1.18
VPS13D-211ENST00000543710 KCNJ13O60928 360 aa7.66□□□□□ -1.18
VPS13D-211ENST00000543710 KLF8O95600 359 aaPredicted RBP7.66□□□□□ -1.18
VPS13D-211ENST00000543710 PRPS1L1P21108 318 aa7.66□□□□□ -1.18
VPS13D-211ENST00000543710 CFL1P23528 166 aaKnown RBP7.66□□□□□ -1.18
VPS13D-211ENST00000543710 NSG1P42857 185 aa7.66□□□□□ -1.18
VPS13D-211ENST00000543710 PAFAH1B3Q15102 231 aaKnown RBP7.66□□□□□ -1.18
VPS13D-211ENST00000543710 WSCD1Q658N2 575 aa7.66□□□□□ -1.18
VPS13D-211ENST00000543710 SLC25A25Q6KCM7 469 aa7.66□□□□□ -1.18
VPS13D-211ENST00000543710 PIGZQ86VD9 579 aa7.66□□□□□ -1.18
VPS13D-211ENST00000543710 ECHDC2Q86YB7 292 aa7.66□□□□□ -1.18
VPS13D-211ENST00000543710 PCDH20Q8N6Y1 951 aaKnown RBP7.66□□□□□ -1.18
VPS13D-211ENST00000543710 CMTM7Q96FZ5 175 aa7.66□□□□□ -1.18
VPS13D-211ENST00000543710 TM9SF2Q99805 663 aa7.66□□□□□ -1.18
VPS13D-211ENST00000543710 MYOCQ99972 504 aa7.66□□□□□ -1.18
VPS13D-211ENST00000543710 CCDC86Q9H6F5 360 aaKnown RBP7.66□□□□□ -1.18
VPS13D-211ENST00000543710 FBXO9Q9UK97 447 aaPredicted RBP7.66□□□□□ -1.18
VPS13D-211ENST00000543710 PCDHGA11Q9Y5H2 935 aa7.66□□□□□ -1.18
VPS13D-211ENST00000543710 ATP6AP2A0A1C7CYW4 349 aa7.66□□□□□ -1.18
VPS13D-211ENST00000543710 C2CD4BA6NLJ0 364 aa7.66□□□□□ -1.18
VPS13D-211ENST00000543710 OR2AG2A6NM03 316 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms