RNA–Protein interactions for RNA: ENST00000543633.5

VPS33A-208, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 2,019 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-208ENST00000543633 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.4□□□□□ -0.26
VPS33A-208ENST00000543633 ISPDA4D126 451 aa13.4□□□□□ -0.26
VPS33A-208ENST00000543633 CLDN24A6NM45 220 aa13.4□□□□□ -0.26
VPS33A-208ENST00000543633 AQP9O43315 295 aa13.4□□□□□ -0.26
VPS33A-208ENST00000543633 SEC22BO75396 215 aa13.4□□□□□ -0.26
VPS33A-208ENST00000543633 FPR1P21462 350 aa13.4□□□□□ -0.26
VPS33A-208ENST00000543633 S100A3P33764 101 aa13.4□□□□□ -0.26
VPS33A-208ENST00000543633 OR1G1P47890 313 aa13.4□□□□□ -0.26
VPS33A-208ENST00000543633 RPS14P62263 151 aaKnown RBP13.4□□□□□ -0.26
VPS33A-208ENST00000543633 ABRQ12979 859 aa13.4□□□□□ -0.26
VPS33A-208ENST00000543633 GPR17Q13304 367 aa13.4□□□□□ -0.26
VPS33A-208ENST00000543633 ZNF177Q13360 481 aaPredicted RBP13.4□□□□□ -0.26
VPS33A-208ENST00000543633 HIST2H2ACQ16777 129 aaPredicted RBP13.4□□□□□ -0.26
VPS33A-208ENST00000543633 TRIM71Q2Q1W2 868 aaKnown RBP13.4□□□□□ -0.26
VPS33A-208ENST00000543633 GGTA1PQ4G0N0 100 aa13.4□□□□□ -0.26
VPS33A-208ENST00000543633 CLLU1OSQ5K130 101 aa13.4□□□□□ -0.26
VPS33A-208ENST00000543633 LDLRAP1Q5SW96 308 aa13.4□□□□□ -0.26
VPS33A-208ENST00000543633 ERICH5Q6P6B1 374 aa13.4□□□□□ -0.26
VPS33A-208ENST00000543633 SUSD1Q6UWL2 747 aa13.4□□□□□ -0.26
VPS33A-208ENST00000543633 PIWIL3Q7Z3Z3 882 aaKnown RBP13.4□□□□□ -0.26
VPS33A-208ENST00000543633 ADCK1Q86TW2 530 aa13.4□□□□□ -0.26
VPS33A-208ENST00000543633 SERPINA11Q86U17 422 aa13.4□□□□□ -0.26
VPS33A-208ENST00000543633 RGL4Q8IZJ4 473 aa13.4□□□□□ -0.26
VPS33A-208ENST00000543633 FRS2Q8WU20 508 aa13.4□□□□□ -0.26
VPS33A-208ENST00000543633 HHIPQ96QV1 700 aa13.4□□□□□ -0.26
VPS33A-208ENST00000543633 PITX2Q99697 317 aa13.4□□□□□ -0.26
VPS33A-208ENST00000543633 TBCDQ9BTW9 1192 aa13.4□□□□□ -0.26
VPS33A-208ENST00000543633 SERHLQ9NQF3 203 aa13.4□□□□□ -0.26
VPS33A-208ENST00000543633 SRRDQ9UH36 339 aa13.4□□□□□ -0.26
VPS33A-208ENST00000543633 UTS2RQ9UKP6 389 aa13.4□□□□□ -0.26
VPS33A-208ENST00000543633 SLC27A5Q9Y2P5 690 aa13.4□□□□□ -0.26
VPS33A-208ENST00000543633 TMED5Q9Y3A6 229 aa13.4□□□□□ -0.26
VPS33A-208ENST00000543633 TRIM17Q9Y577 477 aa13.4□□□□□ -0.26
VPS33A-208ENST00000543633 PCDHB14Q9Y5E9 798 aa13.4□□□□□ -0.26
VPS33A-208ENST00000543633 TRBV5-4A0A0C4DH59 114 aa13.4□□□□□ -0.26
VPS33A-208ENST00000543633 PTGES3LE9PB15 166 aa13.4□□□□□ -0.26
VPS33A-208ENST00000543633 SEPT4O43236 478 aa13.4□□□□□ -0.26
VPS33A-208ENST00000543633 NADKO95544 446 aaPredicted RBP13.4□□□□□ -0.26
VPS33A-208ENST00000543633 BCKDHAP12694 445 aa13.4□□□□□ -0.26
VPS33A-208ENST00000543633 EPB42P16452 691 aa13.4□□□□□ -0.26
VPS33A-208ENST00000543633 CD40LGP29965 261 aa13.4□□□□□ -0.26
VPS33A-208ENST00000543633 ATP5C1P36542 298 aaKnown RBP13.4□□□□□ -0.26
VPS33A-208ENST00000543633 TMED10P49755 219 aaKnown RBP13.4□□□□□ -0.26
VPS33A-208ENST00000543633 PLIN5Q00G26 463 aa13.4□□□□□ -0.26
VPS33A-208ENST00000543633 PIGFQ07326 219 aa13.4□□□□□ -0.26
VPS33A-208ENST00000543633 NPTX1Q15818 432 aa13.4□□□□□ -0.26
VPS33A-208ENST00000543633 INAQ16352 499 aa13.4□□□□□ -0.26
VPS33A-208ENST00000543633 ADPRMQ3LIE5 342 aa13.4□□□□□ -0.26
VPS33A-208ENST00000543633 INO80DQ53TQ3 878 aaPredicted RBP13.4□□□□□ -0.26
VPS33A-208ENST00000543633 OR2T5Q6IEZ7 315 aa13.4□□□□□ -0.26
VPS33A-208ENST00000543633 TUBA3EQ6PEY2 450 aa13.4□□□□□ -0.26
VPS33A-208ENST00000543633 PLEKHG7Q6ZR37 379 aa13.4□□□□□ -0.26
VPS33A-208ENST00000543633 SLC24A5Q71RS6 500 aa13.4□□□□□ -0.26
VPS33A-208ENST00000543633 ZBTB46Q86UZ6 589 aa13.4□□□□□ -0.26
VPS33A-208ENST00000543633 TSPYL5Q86VY4 417 aaPredicted RBP13.4□□□□□ -0.26
VPS33A-208ENST00000543633 OR2T29Q8NH02 315 aa13.4□□□□□ -0.26
VPS33A-208ENST00000543633 CNIH3Q8TBE1 160 aa13.4□□□□□ -0.26
VPS33A-208ENST00000543633 CD99L2Q8TCZ2 262 aa13.4□□□□□ -0.26
VPS33A-208ENST00000543633 NETO1Q8TDF5 533 aa13.4□□□□□ -0.26
VPS33A-208ENST00000543633 GPR152Q8TDT2 470 aa13.4□□□□□ -0.26
VPS33A-208ENST00000543633 ZFP90Q8TF47 636 aa13.4□□□□□ -0.26
VPS33A-208ENST00000543633 ULK4Q96C45 1275 aa13.4□□□□□ -0.26
VPS33A-208ENST00000543633 EGFL8Q99944 293 aa13.4□□□□□ -0.26
VPS33A-208ENST00000543633 ASPSCR1Q9BZE9 553 aa13.4□□□□□ -0.26
VPS33A-208ENST00000543633 BPIFA1Q9NP55 256 aa13.4□□□□□ -0.26
VPS33A-208ENST00000543633 LTB4R2Q9NPC1 389 aa13.4□□□□□ -0.26
VPS33A-208ENST00000543633 IL1RAPQ9NPH3 570 aa13.4□□□□□ -0.26
VPS33A-208ENST00000543633 LATS2Q9NRM7 1088 aa13.4□□□□□ -0.26
VPS33A-208ENST00000543633 ZMYM5Q9UJ78 669 aa13.4□□□□□ -0.26
VPS33A-208ENST00000543633 RPS6KA6Q9UK32 745 aa13.4□□□□□ -0.26
VPS33A-208ENST00000543633 NDRG4Q9ULP0 352 aaKnown RBP13.4□□□□□ -0.26
VPS33A-208ENST00000543633 A3GALT2U3KPV4 340 aa13.4□□□□□ -0.26
VPS33A-208ENST00000543633 MICAL3Q7RTP6 2002 aa13.4□□□□□ -0.27
VPS33A-208ENST00000543633 SERTM1A2A2V5 107 aa13.39□□□□□ -0.27
VPS33A-208ENST00000543633 IQCF5A8MTL0 148 aa13.39□□□□□ -0.27
VPS33A-208ENST00000543633 E9PQ18 207 aa13.39□□□□□ -0.27
VPS33A-208ENST00000543633 EIF3FO00303 357 aaPredicted RBP13.39□□□□□ -0.27
VPS33A-208ENST00000543633 RGS10O43665 173 aa13.39□□□□□ -0.27
VPS33A-208ENST00000543633 SEMG1P04279 462 aa13.39□□□□□ -0.27
VPS33A-208ENST00000543633 CBSLP0DN79 551 aa13.39□□□□□ -0.27
VPS33A-208ENST00000543633 ELNP15502 786 aa13.39□□□□□ -0.27
VPS33A-208ENST00000543633 PFKLP17858 780 aa13.39□□□□□ -0.27
VPS33A-208ENST00000543633 ITGALP20701 1170 aa13.39□□□□□ -0.27
VPS33A-208ENST00000543633 EFNA1P20827 205 aaPredicted RBP13.39□□□□□ -0.27
VPS33A-208ENST00000543633 PTPN6P29350 595 aa13.39□□□□□ -0.27
VPS33A-208ENST00000543633 DNAJA1P31689 397 aaKnown RBP13.39□□□□□ -0.27
VPS33A-208ENST00000543633 CBSP35520 551 aa13.39□□□□□ -0.27
VPS33A-208ENST00000543633 EIF2B2P49770 351 aaKnown RBP13.39□□□□□ -0.27
VPS33A-208ENST00000543633 FAM189BP81408 668 aa13.39□□□□□ -0.27
VPS33A-208ENST00000543633 CDC20Q12834 499 aa13.39□□□□□ -0.27
VPS33A-208ENST00000543633 BOP1Q14137 746 aaKnown RBP13.39□□□□□ -0.27
VPS33A-208ENST00000543633 CLCA4Q14CN2 919 aa13.39□□□□□ -0.27
VPS33A-208ENST00000543633 AAK1Q2M2I8 961 aa13.39□□□□□ -0.27
VPS33A-208ENST00000543633 CES5AQ6NT32 575 aa13.39□□□□□ -0.27
VPS33A-208ENST00000543633 DNAJC14Q6Y2X3 702 aaPredicted RBP13.39□□□□□ -0.27
VPS33A-208ENST00000543633 MACC1Q6ZN28 852 aa13.39□□□□□ -0.27
VPS33A-208ENST00000543633 ZBTB2Q8N680 514 aa13.39□□□□□ -0.27
VPS33A-208ENST00000543633 KIAA1958Q8N8K9 716 aa13.39□□□□□ -0.27
VPS33A-208ENST00000543633 SCAIQ8N9R8 606 aa13.39□□□□□ -0.27
VPS33A-208ENST00000543633 GLMNQ92990 594 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms