RNA–Protein interactions for RNA: ENST00000542845.3

LIMS1-214, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 5

Gene LIMS1, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-214ENST00000542845 SYTL2Q9HCH5 934 aa4.58□□□□□ -1.68
LIMS1-214ENST00000542845 FAM60AQ9NP50 221 aa4.58□□□□□ -1.68
LIMS1-214ENST00000542845 BPIFA1Q9NP55 256 aa4.58□□□□□ -1.68
LIMS1-214ENST00000542845 KCNN3Q9UGI6 736 aa4.58□□□□□ -1.68
LIMS1-214ENST00000542845 SLC24A2Q9UI40 661 aa4.58□□□□□ -1.68
LIMS1-214ENST00000542845 NOCTQ9UK39 431 aaKnown RBP4.58□□□□□ -1.68
LIMS1-214ENST00000542845 SHOC2Q9UQ13 582 aa4.58□□□□□ -1.68
LIMS1-214ENST00000542845 RNF6Q9Y252 685 aa4.58□□□□□ -1.68
LIMS1-214ENST00000542845 ZNF835Q9Y2P0 537 aa4.58□□□□□ -1.68
LIMS1-214ENST00000542845 HS3ST3B1Q9Y662 390 aa4.58□□□□□ -1.68
LIMS1-214ENST00000542845 AP1M2Q9Y6Q5 423 aa4.58□□□□□ -1.68
LIMS1-214ENST00000542845 CNTRLQ7Z7A1 2325 aa4.58□□□□□ -1.68
LIMS1-214ENST00000542845 ABCA4P78363 2273 aa4.57□□□□□ -1.68
LIMS1-214ENST00000542845 NSG1A0A0A6YYJ2 146 aa4.57□□□□□ -1.68
LIMS1-214ENST00000542845 FAM237BA0A1B0GVD1 139 aa4.57□□□□□ -1.68
LIMS1-214ENST00000542845 BICDL2A1A5D9 508 aa4.57□□□□□ -1.68
LIMS1-214ENST00000542845 H3BRJ5 948 aa4.57□□□□□ -1.68
LIMS1-214ENST00000542845 BTN3A3O00478 584 aa4.57□□□□□ -1.68
LIMS1-214ENST00000542845 BTN3A1O00481 513 aa4.57□□□□□ -1.68
LIMS1-214ENST00000542845 BIN1O00499 593 aa4.57□□□□□ -1.68
LIMS1-214ENST00000542845 PES1O00541 588 aaKnown RBP4.57□□□□□ -1.68
LIMS1-214ENST00000542845 MAP2K7O14733 419 aa4.57□□□□□ -1.68
LIMS1-214ENST00000542845 ZSCAN9O15535 394 aaPredicted RBP4.57□□□□□ -1.68
LIMS1-214ENST00000542845 TTI1O43156 1089 aa4.57□□□□□ -1.68
LIMS1-214ENST00000542845 ASNA1O43681 348 aa4.57□□□□□ -1.68
LIMS1-214ENST00000542845 MAFKO60675 156 aa4.57□□□□□ -1.68
LIMS1-214ENST00000542845 RGS9O75916 674 aaPredicted RBP4.57□□□□□ -1.68
LIMS1-214ENST00000542845 USP1O94782 785 aa4.57□□□□□ -1.68
LIMS1-214ENST00000542845 TOXO94900 526 aa4.57□□□□□ -1.68
LIMS1-214ENST00000542845 LSM8O95777 96 aaKnown RBP4.57□□□□□ -1.68
LIMS1-214ENST00000542845 MLYCDO95822 493 aa4.57□□□□□ -1.68
LIMS1-214ENST00000542845 GNA14O95837 355 aa4.57□□□□□ -1.68
LIMS1-214ENST00000542845 TPOP07202 933 aa4.57□□□□□ -1.68
LIMS1-214ENST00000542845 CELA2AP08217 269 aa4.57□□□□□ -1.68
LIMS1-214ENST00000542845 PRR35P0CG20 571 aa4.57□□□□□ -1.68
LIMS1-214ENST00000542845 PIM1P11309 404 aaPredicted RBP4.57□□□□□ -1.68
LIMS1-214ENST00000542845 DESP17661 470 aa4.57□□□□□ -1.68
LIMS1-214ENST00000542845 EPHA1P21709 976 aa4.57□□□□□ -1.68
LIMS1-214ENST00000542845 AMPD1P23109 780 aa4.57□□□□□ -1.68
LIMS1-214ENST00000542845 ADH6P28332 368 aa4.57□□□□□ -1.68
LIMS1-214ENST00000542845 SPAM1P38567 509 aa4.57□□□□□ -1.68
LIMS1-214ENST00000542845 NSG1P42857 185 aa4.57□□□□□ -1.68
LIMS1-214ENST00000542845 RPL7AP62424 266 aaKnown RBP4.57□□□□□ -1.68
LIMS1-214ENST00000542845 NKX6-1P78426 367 aaPredicted RBP4.57□□□□□ -1.68
LIMS1-214ENST00000542845 NKG7Q16617 165 aa4.57□□□□□ -1.68
LIMS1-214ENST00000542845 DEFB113Q30KQ7 82 aa4.57□□□□□ -1.68
LIMS1-214ENST00000542845 KRTCAP3Q53RY4 240 aa4.57□□□□□ -1.68
LIMS1-214ENST00000542845 COBLL1Q53SF7 1204 aa4.57□□□□□ -1.68
LIMS1-214ENST00000542845 ERMARDQ5T6L9 678 aa4.57□□□□□ -1.68
LIMS1-214ENST00000542845 ABHD17BQ5VST6 288 aa4.57□□□□□ -1.68
LIMS1-214ENST00000542845 ATL3Q6DD88 541 aa4.57□□□□□ -1.68
LIMS1-214ENST00000542845 HMBOX1Q6NT76 420 aa4.57□□□□□ -1.68
LIMS1-214ENST00000542845 HIBCHQ6NVY1 386 aaPredicted RBP4.57□□□□□ -1.68
LIMS1-214ENST00000542845 TTI2Q6NXR4 508 aa4.57□□□□□ -1.68
LIMS1-214ENST00000542845 Q6ZPB1 254 aaPredicted RBP4.57□□□□□ -1.68
LIMS1-214ENST00000542845 ARHGEF18Q6ZSZ5 1173 aa4.57□□□□□ -1.68
LIMS1-214ENST00000542845 DET1Q7L5Y6 550 aa4.57□□□□□ -1.68
LIMS1-214ENST00000542845 OVCH1Q7RTY7 1134 aa4.57□□□□□ -1.68
LIMS1-214ENST00000542845 CAMKMTQ7Z624 323 aa4.57□□□□□ -1.68
LIMS1-214ENST00000542845 CDC20BQ86Y33 519 aa4.57□□□□□ -1.68
LIMS1-214ENST00000542845 CLYBLQ8N0X4 340 aa4.57□□□□□ -1.68
LIMS1-214ENST00000542845 EID3Q8N140 333 aa4.57□□□□□ -1.68
LIMS1-214ENST00000542845 CARFQ8N187 725 aa4.57□□□□□ -1.68
LIMS1-214ENST00000542845 CIARTQ8N365 385 aaPredicted RBP4.57□□□□□ -1.68
LIMS1-214ENST00000542845 LILRB2Q8N423 598 aa4.57□□□□□ -1.68
LIMS1-214ENST00000542845 ATPAF2Q8N5M1 289 aa4.57□□□□□ -1.68
LIMS1-214ENST00000542845 TRAM1L1Q8N609 369 aa4.57□□□□□ -1.68
LIMS1-214ENST00000542845 BEND7Q8N7W2 519 aaPredicted RBP4.57□□□□□ -1.68
LIMS1-214ENST00000542845 ACBD4Q8NC06 268 aa4.57□□□□□ -1.68
LIMS1-214ENST00000542845 OR10Q1Q8NGQ4 319 aa4.57□□□□□ -1.68
LIMS1-214ENST00000542845 LILRB4Q8NHJ6 448 aa4.57□□□□□ -1.68
LIMS1-214ENST00000542845 PROKR1Q8TCW9 393 aa4.57□□□□□ -1.68
LIMS1-214ENST00000542845 ASB5Q8WWX0 329 aa4.57□□□□□ -1.68
LIMS1-214ENST00000542845 GPR137Q96N19 417 aa4.57□□□□□ -1.68
LIMS1-214ENST00000542845 MCEEQ96PE7 176 aa4.57□□□□□ -1.68
LIMS1-214ENST00000542845 GSDMAQ96QA5 445 aa4.57□□□□□ -1.68
LIMS1-214ENST00000542845 MGME1Q9BQP7 344 aa4.57□□□□□ -1.68
LIMS1-214ENST00000542845 CRB3Q9BUF7 120 aa4.57□□□□□ -1.68
LIMS1-214ENST00000542845 ZSCAN5AQ9BUG6 496 aa4.57□□□□□ -1.68
LIMS1-214ENST00000542845 NUP85Q9BW27 656 aa4.57□□□□□ -1.68
LIMS1-214ENST00000542845 YIPF2Q9BWQ6 316 aa4.57□□□□□ -1.68
LIMS1-214ENST00000542845 GPR63Q9BZJ6 419 aa4.57□□□□□ -1.68
LIMS1-214ENST00000542845 XKR8Q9H6D3 395 aa4.57□□□□□ -1.68
LIMS1-214ENST00000542845 PCDH9Q9HC56 1237 aa4.57□□□□□ -1.68
LIMS1-214ENST00000542845 NLRC4Q9NPP4 1024 aa4.57□□□□□ -1.68
LIMS1-214ENST00000542845 SLC22A11Q9NSA0 550 aa4.57□□□□□ -1.68
LIMS1-214ENST00000542845 ANKRD10Q9NXR5 420 aa4.57□□□□□ -1.68
LIMS1-214ENST00000542845 TAS2R14Q9NYV8 317 aa4.57□□□□□ -1.68
LIMS1-214ENST00000542845 ADAM22Q9P0K1 906 aa4.57□□□□□ -1.68
LIMS1-214ENST00000542845 IL17CQ9P0M4 197 aa4.57□□□□□ -1.68
LIMS1-214ENST00000542845 POMT2Q9UKY4 750 aa4.57□□□□□ -1.68
LIMS1-214ENST00000542845 DNPEPQ9ULA0 475 aa4.57□□□□□ -1.68
LIMS1-214ENST00000542845 MAU2Q9Y6X3 613 aa4.57□□□□□ -1.68
LIMS1-214ENST00000542845 COLEC10Q9Y6Z7 277 aa4.57□□□□□ -1.68
LIMS1-214ENST00000542845 CSPG4Q6UVK1 2322 aa4.57□□□□□ -1.68
LIMS1-214ENST00000542845 FBN1P35555 2871 aaKnown RBP4.57□□□□□ -1.68
LIMS1-214ENST00000542845 SEC16AO15027 2179 aa4.57□□□□□ -1.68
LIMS1-214ENST00000542845 INTS1Q8N201 2190 aaKnown RBP4.57□□□□□ -1.68
LIMS1-214ENST00000542845 GTPBP10A4D1E9 387 aaKnown RBP4.56□□□□□ -1.68
LIMS1-214ENST00000542845 OR5H15A6NDH6 313 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms