RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 SH2D3AQ9BRG2 576 aa3.8□□□□□ -1.8
SFSWAP-211ENST00000542813 FAM234AQ9H0X4 552 aa3.8□□□□□ -1.8
SFSWAP-211ENST00000542813 S1PR5Q9H228 398 aa3.8□□□□□ -1.8
SFSWAP-211ENST00000542813 RWDD1Q9H446 243 aaPredicted RBP3.8□□□□□ -1.8
SFSWAP-211ENST00000542813 YY1AP1Q9H869 796 aa3.8□□□□□ -1.8
SFSWAP-211ENST00000542813 CPNE5Q9HCH3 593 aa3.8□□□□□ -1.8
SFSWAP-211ENST00000542813 CNGB3Q9NQW8 809 aa3.8□□□□□ -1.8
SFSWAP-211ENST00000542813 GAGE2DQ9UEU5 116 aa3.8□□□□□ -1.8
SFSWAP-211ENST00000542813 MAD2L2Q9UI95 211 aa3.8□□□□□ -1.8
SFSWAP-211ENST00000542813 CCPG1Q9ULG6 757 aa3.8□□□□□ -1.8
SFSWAP-211ENST00000542813 GPR132Q9UNW8 380 aa3.8□□□□□ -1.8
SFSWAP-211ENST00000542813 NME7Q9Y5B8 376 aa3.8□□□□□ -1.8
SFSWAP-211ENST00000542813 PTPN23Q9H3S7 1636 aa3.8□□□□□ -1.8
SFSWAP-211ENST00000542813 ADGRB3O60242 1522 aa3.8□□□□□ -1.8
SFSWAP-211ENST00000542813 FYCO1Q9BQS8 1478 aa3.79□□□□□ -1.8
SFSWAP-211ENST00000542813 ARHGAP31Q2M1Z3 1444 aa3.79□□□□□ -1.8
SFSWAP-211ENST00000542813 PLEKHG1Q9ULL1 1385 aa3.79□□□□□ -1.8
SFSWAP-211ENST00000542813 SPHKAPQ2M3C7 1700 aa3.79□□□□□ -1.8
SFSWAP-211ENST00000542813 A0A1W2PPW3 197 aa3.79□□□□□ -1.8
SFSWAP-211ENST00000542813 KCNU1A8MYU2 1149 aa3.79□□□□□ -1.8
SFSWAP-211ENST00000542813 KPNA7A9QM74 516 aa3.79□□□□□ -1.8
SFSWAP-211ENST00000542813 FAM90A26D6RGX4 464 aa3.79□□□□□ -1.8
SFSWAP-211ENST00000542813 PLK4O00444 970 aa3.79□□□□□ -1.8
SFSWAP-211ENST00000542813 MGST3O14880 152 aa3.79□□□□□ -1.8
SFSWAP-211ENST00000542813 ANKRD28O15084 1053 aa3.79□□□□□ -1.8
SFSWAP-211ENST00000542813 OR10H2O60403 315 aa3.79□□□□□ -1.8
SFSWAP-211ENST00000542813 PLGP00747 810 aaPredicted RBP3.79□□□□□ -1.8
SFSWAP-211ENST00000542813 PDGFBP01127 241 aaPredicted RBP3.79□□□□□ -1.8
SFSWAP-211ENST00000542813 NHLRC4P0CG21 123 aaPredicted RBP3.79□□□□□ -1.8
SFSWAP-211ENST00000542813 AREGP15514 252 aa3.79□□□□□ -1.8
SFSWAP-211ENST00000542813 HNRNPH1P31943 449 aaKnown RBP3.79□□□□□ -1.8
SFSWAP-211ENST00000542813 CHRNA3P32297 505 aa3.79□□□□□ -1.8
SFSWAP-211ENST00000542813 ASMTP46597 345 aa3.79□□□□□ -1.8
SFSWAP-211ENST00000542813 ALDH7A1P49419 539 aaKnown RBP3.79□□□□□ -1.8
SFSWAP-211ENST00000542813 RARRES1P49788 294 aa3.79□□□□□ -1.8
SFSWAP-211ENST00000542813 MAPK12P53778 367 aa3.79□□□□□ -1.8
SFSWAP-211ENST00000542813 MFAP3P55082 362 aa3.79□□□□□ -1.8
SFSWAP-211ENST00000542813 INHBCP55103 352 aa3.79□□□□□ -1.8
SFSWAP-211ENST00000542813 TAS2R38P59533 333 aa3.79□□□□□ -1.8
SFSWAP-211ENST00000542813 PRKCEQ02156 737 aa3.79□□□□□ -1.8
SFSWAP-211ENST00000542813 TRIM29Q14134 588 aa3.79□□□□□ -1.8
SFSWAP-211ENST00000542813 ZNF268Q14587 947 aaPredicted RBP3.79□□□□□ -1.8
SFSWAP-211ENST00000542813 UGP2Q16851 508 aa3.79□□□□□ -1.8
SFSWAP-211ENST00000542813 SMTNL2Q2TAL5 461 aa3.79□□□□□ -1.8
SFSWAP-211ENST00000542813 C6orf10Q5SRN2 563 aa3.79□□□□□ -1.8
SFSWAP-211ENST00000542813 STRIP1Q5VSL9 837 aa3.79□□□□□ -1.8
SFSWAP-211ENST00000542813 KCTD18Q6PI47 426 aaPredicted RBP3.79□□□□□ -1.8
SFSWAP-211ENST00000542813 SLC36A4Q6YBV0 504 aa3.79□□□□□ -1.8
SFSWAP-211ENST00000542813 TMPRSS11FQ6ZWK6 438 aa3.79□□□□□ -1.8
SFSWAP-211ENST00000542813 NRARPQ7Z6K4 114 aa3.79□□□□□ -1.8
SFSWAP-211ENST00000542813 RPAINQ86UA6 219 aa3.79□□□□□ -1.8
SFSWAP-211ENST00000542813 ZNF575Q86XF7 245 aa3.79□□□□□ -1.8
SFSWAP-211ENST00000542813 NRROSQ86YC3 692 aa3.79□□□□□ -1.8
SFSWAP-211ENST00000542813 GPSM1Q86YR5 675 aa3.79□□□□□ -1.8
SFSWAP-211ENST00000542813 AQP12AQ8IXF9 295 aa3.79□□□□□ -1.8
SFSWAP-211ENST00000542813 GCSAMQ8N6F7 178 aa3.79□□□□□ -1.8
SFSWAP-211ENST00000542813 CLEC1AQ8NC01 280 aa3.79□□□□□ -1.8
SFSWAP-211ENST00000542813 GMCL1P1Q8NEA9 526 aa3.79□□□□□ -1.8
SFSWAP-211ENST00000542813 DENND6BQ8NEG7 585 aa3.79□□□□□ -1.8
SFSWAP-211ENST00000542813 SYN2Q92777 582 aaPredicted RBP3.79□□□□□ -1.8
SFSWAP-211ENST00000542813 RHBDF1Q96CC6 855 aa3.79□□□□□ -1.8
SFSWAP-211ENST00000542813 SGF29Q96ES7 293 aa3.79□□□□□ -1.8
SFSWAP-211ENST00000542813 ZFYVE19Q96K21 471 aa3.79□□□□□ -1.8
SFSWAP-211ENST00000542813 SAMD8Q96LT4 415 aa3.79□□□□□ -1.8
SFSWAP-211ENST00000542813 UROC1Q96N76 676 aa3.79□□□□□ -1.8
SFSWAP-211ENST00000542813 GFM1Q96RP9 751 aaKnown RBP3.79□□□□□ -1.8
SFSWAP-211ENST00000542813 TIMP4Q99727 224 aa3.79□□□□□ -1.8
SFSWAP-211ENST00000542813 CRACR2AQ9BSW2 395 aa3.79□□□□□ -1.8
SFSWAP-211ENST00000542813 TEX13AQ9BXU3 409 aaPredicted RBP3.79□□□□□ -1.8
SFSWAP-211ENST00000542813 PANK2Q9BZ23 570 aa3.79□□□□□ -1.8
SFSWAP-211ENST00000542813 HHATLQ9HCP6 504 aa3.79□□□□□ -1.8
SFSWAP-211ENST00000542813 THSD1Q9NS62 852 aa3.79□□□□□ -1.8
SFSWAP-211ENST00000542813 SLC35D1Q9NTN3 355 aa3.79□□□□□ -1.8
SFSWAP-211ENST00000542813 TMEM45AQ9NWC5 275 aa3.79□□□□□ -1.8
SFSWAP-211ENST00000542813 FAM118AQ9NWS6 357 aa3.79□□□□□ -1.8
SFSWAP-211ENST00000542813 OSER1Q9NX31 292 aa3.79□□□□□ -1.8
SFSWAP-211ENST00000542813 AATFQ9NY61 560 aaKnown RBP eCLIP3.79□□□□□ -1.8
SFSWAP-211ENST00000542813 RCC2Q9P258 522 aaKnown RBP3.79□□□□□ -1.8
SFSWAP-211ENST00000542813 CDC14AQ9UNH5 594 aa3.79□□□□□ -1.8
SFSWAP-211ENST00000542813 KCNK6Q9Y257 313 aa3.79□□□□□ -1.8
SFSWAP-211ENST00000542813 PIK3C2BO00750 1634 aa3.79□□□□□ -1.8
SFSWAP-211ENST00000542813 RPRD2Q5VT52 1461 aaKnown RBP3.79□□□□□ -1.8
SFSWAP-211ENST00000542813 RALGAPBQ86X10 1494 aa3.79□□□□□ -1.8
SFSWAP-211ENST00000542813 FAM205AQ6ZU69 1335 aa3.78□□□□□ -1.8
SFSWAP-211ENST00000542813 A0A087X1B8 175 aa3.78□□□□□ -1.8
SFSWAP-211ENST00000542813 TRBV5-3A0A0A0MS03 114 aa3.78□□□□□ -1.8
SFSWAP-211ENST00000542813 C2orf92A0A1B0GVN3 265 aa3.78□□□□□ -1.8
SFSWAP-211ENST00000542813 ARHGAP42A6NI28 874 aa3.78□□□□□ -1.8
SFSWAP-211ENST00000542813 WNT9BO14905 357 aa3.78□□□□□ -1.8
SFSWAP-211ENST00000542813 KCNN4O15554 427 aa3.78□□□□□ -1.8
SFSWAP-211ENST00000542813 FLRT2O43155 660 aa3.78□□□□□ -1.8
SFSWAP-211ENST00000542813 HSF2BPO75031 334 aa3.78□□□□□ -1.8
SFSWAP-211ENST00000542813 ATP9AO75110 1047 aa3.78□□□□□ -1.8
SFSWAP-211ENST00000542813 AKR7A3O95154 331 aa3.78□□□□□ -1.8
SFSWAP-211ENST00000542813 PTBP3O95758 552 aaKnown RBP3.78□□□□□ -1.8
SFSWAP-211ENST00000542813 C9P02748 559 aa3.78□□□□□ -1.8
SFSWAP-211ENST00000542813 LCATP04180 440 aa3.78□□□□□ -1.8
SFSWAP-211ENST00000542813 CSN3P07498 182 aa3.78□□□□□ -1.8
SFSWAP-211ENST00000542813 SAGP10523 405 aaPredicted RBP3.78□□□□□ -1.8
SFSWAP-211ENST00000542813 MYL6BP14649 208 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms