RNA–Protein interactions for RNA: ENST00000542663.1

CLSTN3-214, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 390 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-214ENST00000542663 APOC2P02655 101 aa17.09■□□□□ 0.33
CLSTN3-214ENST00000542663 ALBP02768 609 aa17.09■□□□□ 0.33
CLSTN3-214ENST00000542663 ATP5OP48047 213 aa17.09■□□□□ 0.33
CLSTN3-214ENST00000542663 BRD3Q15059 726 aa17.09■□□□□ 0.33
CLSTN3-214ENST00000542663 DBN1Q16643 649 aa17.09■□□□□ 0.33
CLSTN3-214ENST00000542663 RPUSD3Q6P087 351 aaKnown RBP17.09■□□□□ 0.33
CLSTN3-214ENST00000542663 FAM180AQ6UWF9 173 aa17.09■□□□□ 0.33
CLSTN3-214ENST00000542663 SHISA6Q6ZSJ9 500 aa17.09■□□□□ 0.33
CLSTN3-214ENST00000542663 TAS2R42Q7RTR8 314 aa17.09■□□□□ 0.33
CLSTN3-214ENST00000542663 CCDC50Q8IVM0 306 aa17.09■□□□□ 0.33
CLSTN3-214ENST00000542663 RCOR2Q8IZ40 523 aa17.09■□□□□ 0.33
CLSTN3-214ENST00000542663 OR11G2Q8NGC1 345 aa17.09■□□□□ 0.33
CLSTN3-214ENST00000542663 DLG3Q92796 817 aa17.09■□□□□ 0.33
CLSTN3-214ENST00000542663 THOC3Q96J01 351 aaKnown RBP17.09■□□□□ 0.33
CLSTN3-214ENST00000542663 TBL1YQ9BQ87 522 aa17.09■□□□□ 0.33
CLSTN3-214ENST00000542663 TRIM56Q9BRZ2 755 aaKnown RBP17.09■□□□□ 0.33
CLSTN3-214ENST00000542663 HEMGNQ9BXL5 484 aa17.09■□□□□ 0.33
CLSTN3-214ENST00000542663 SOX17Q9H6I2 414 aaPredicted RBP17.09■□□□□ 0.33
CLSTN3-214ENST00000542663 EPS8L2Q9H6S3 715 aa17.09■□□□□ 0.33
CLSTN3-214ENST00000542663 NHEJ1Q9H9Q4 299 aaPredicted RBP17.09■□□□□ 0.33
CLSTN3-214ENST00000542663 MRM3Q9HC36 420 aaKnown RBP17.09■□□□□ 0.33
CLSTN3-214ENST00000542663 OLAHQ9NV23 265 aa17.09■□□□□ 0.33
CLSTN3-214ENST00000542663 NLE1Q9NVX2 485 aaPredicted RBP17.09■□□□□ 0.33
CLSTN3-214ENST00000542663 CTSFQ9UBX1 484 aa17.09■□□□□ 0.33
CLSTN3-214ENST00000542663 PCNX1Q96RV3 2341 aa17.09■□□□□ 0.33
CLSTN3-214ENST00000542663 SLC5A10A0PJK1 596 aa17.08■□□□□ 0.32
CLSTN3-214ENST00000542663 HEATR9A2RTY3 570 aa17.08■□□□□ 0.32
CLSTN3-214ENST00000542663 DSCR3O14972 297 aa17.08■□□□□ 0.32
CLSTN3-214ENST00000542663 AP2A1O95782 977 aa17.08■□□□□ 0.32
CLSTN3-214ENST00000542663 MCM3P25205 808 aa17.08■□□□□ 0.32
CLSTN3-214ENST00000542663 ARSFP54793 590 aa17.08■□□□□ 0.32
CLSTN3-214ENST00000542663 KIR2DS3Q14952 304 aa17.08■□□□□ 0.32
CLSTN3-214ENST00000542663 IRAK1BP1Q5VVH5 260 aa17.08■□□□□ 0.32
CLSTN3-214ENST00000542663 FCRL6Q6DN72 434 aa17.08■□□□□ 0.32
CLSTN3-214ENST00000542663 ISLR2Q6UXK2 745 aa17.08■□□□□ 0.32
CLSTN3-214ENST00000542663 LINC00696Q6ZRV3 163 aa17.08■□□□□ 0.32
CLSTN3-214ENST00000542663 MCATQ8IVS2 390 aaKnown RBP17.08■□□□□ 0.32
CLSTN3-214ENST00000542663 KLHDC8BQ8IXV7 354 aa17.08■□□□□ 0.32
CLSTN3-214ENST00000542663 DTWD1Q8N5C7 304 aa17.08■□□□□ 0.32
CLSTN3-214ENST00000542663 LMNTD1Q8N9Z9 388 aa17.08■□□□□ 0.32
CLSTN3-214ENST00000542663 LINC01555Q8NAE3 123 aa17.08■□□□□ 0.32
CLSTN3-214ENST00000542663 ITLN2Q8WWU7 325 aaPredicted RBP17.08■□□□□ 0.32
CLSTN3-214ENST00000542663 ELMO1Q92556 727 aa17.08■□□□□ 0.32
CLSTN3-214ENST00000542663 MENTQ9BUN1 341 aa17.08■□□□□ 0.32
CLSTN3-214ENST00000542663 ABHD10Q9NUJ1 306 aa17.08■□□□□ 0.32
CLSTN3-214ENST00000542663 SMARCAL1Q9NZC9 954 aa17.08■□□□□ 0.32
CLSTN3-214ENST00000542663 HIVEP1P15822 2718 aa17.07■□□□□ 0.32
CLSTN3-214ENST00000542663 PKLRP30613 574 aa17.07■□□□□ 0.32
CLSTN3-214ENST00000542663 HADHBP55084 474 aaKnown RBP17.07■□□□□ 0.32
CLSTN3-214ENST00000542663 KCNK10P57789 538 aa17.07■□□□□ 0.32
CLSTN3-214ENST00000542663 CACNG1Q06432 222 aa17.07■□□□□ 0.32
CLSTN3-214ENST00000542663 MFAP5Q13361 173 aa17.07■□□□□ 0.32
CLSTN3-214ENST00000542663 ART3Q13508 389 aa17.07■□□□□ 0.32
CLSTN3-214ENST00000542663 BCORP1Q8N888 145 aa17.07■□□□□ 0.32
CLSTN3-214ENST00000542663 CCDC110Q8TBZ0 833 aa17.07■□□□□ 0.32
CLSTN3-214ENST00000542663 ACTL9Q8TC94 416 aa17.07■□□□□ 0.32
CLSTN3-214ENST00000542663 KRT35Q92764 455 aa17.07■□□□□ 0.32
CLSTN3-214ENST00000542663 CDKN2AIPNLQ96HQ2 116 aa17.07■□□□□ 0.32
CLSTN3-214ENST00000542663 CCDC42Q96M95 316 aa17.07■□□□□ 0.32
CLSTN3-214ENST00000542663 TAAR6Q96RI8 345 aa17.07■□□□□ 0.32
CLSTN3-214ENST00000542663 ENAMQ9NRM1 1142 aa17.07■□□□□ 0.32
CLSTN3-214ENST00000542663 IGSF5Q9NSI5 407 aa17.07■□□□□ 0.32
CLSTN3-214ENST00000542663 CUTCQ9NTM9 273 aa17.07■□□□□ 0.32
CLSTN3-214ENST00000542663 INTUQ9ULD6 942 aa17.07■□□□□ 0.32
CLSTN3-214ENST00000542663 HEATR5BQ9P2D3 2071 aa17.07■□□□□ 0.32
CLSTN3-214ENST00000542663 CACNA1CQ13936 2221 aa17.06■□□□□ 0.32
CLSTN3-214ENST00000542663 SYCE3A1L190 88 aa17.06■□□□□ 0.32
CLSTN3-214ENST00000542663 VSTM2BA6NLU5 285 aa17.06■□□□□ 0.32
CLSTN3-214ENST00000542663 PCDH17O14917 1159 aa17.06■□□□□ 0.32
CLSTN3-214ENST00000542663 NSG1P42857 185 aa17.06■□□□□ 0.32
CLSTN3-214ENST00000542663 OR1D4P47884 311 aa17.06■□□□□ 0.32
CLSTN3-214ENST00000542663 PRPSAP1Q14558 356 aa17.06■□□□□ 0.32
CLSTN3-214ENST00000542663 RBBP7Q16576 425 aa17.06■□□□□ 0.32
CLSTN3-214ENST00000542663 ZXDCQ2QGD7 858 aaPredicted RBP17.06■□□□□ 0.32
CLSTN3-214ENST00000542663 METTL27Q8N6F8 245 aaPredicted RBP17.06■□□□□ 0.32
CLSTN3-214ENST00000542663 OR1N1Q8NGS0 311 aa17.06■□□□□ 0.32
CLSTN3-214ENST00000542663 LMF1Q96S06 567 aa17.06■□□□□ 0.32
CLSTN3-214ENST00000542663 FAM118BQ9BPY3 351 aa17.06■□□□□ 0.32
CLSTN3-214ENST00000542663 SEMA3GQ9NS98 782 aa17.06■□□□□ 0.32
CLSTN3-214ENST00000542663 FEZ2Q9UHY8 353 aaPredicted RBP17.06■□□□□ 0.32
CLSTN3-214ENST00000542663 KLF2Q9Y5W3 355 aaPredicted RBP17.06■□□□□ 0.32
CLSTN3-214ENST00000542663 SCN2AQ99250 2005 aa17.06■□□□□ 0.32
CLSTN3-214ENST00000542663 KCNN4O15554 427 aa17.05■□□□□ 0.32
CLSTN3-214ENST00000542663 KRT38O76015 456 aa17.05■□□□□ 0.32
CLSTN3-214ENST00000542663 MED26O95402 600 aa17.05■□□□□ 0.32
CLSTN3-214ENST00000542663 FTH1P02794 183 aa17.05■□□□□ 0.32
CLSTN3-214ENST00000542663 PIM1P11309 404 aaPredicted RBP17.05■□□□□ 0.32
CLSTN3-214ENST00000542663 TPH1P17752 444 aa17.05■□□□□ 0.32
CLSTN3-214ENST00000542663 GRIA3P42263 894 aa17.05■□□□□ 0.32
CLSTN3-214ENST00000542663 GRB7Q14451 532 aa17.05■□□□□ 0.32
CLSTN3-214ENST00000542663 KCTD11Q693B1 232 aa17.05■□□□□ 0.32
CLSTN3-214ENST00000542663 PACS1Q6VY07 963 aa17.05■□□□□ 0.32
CLSTN3-214ENST00000542663 TMTC1Q8IUR5 882 aa17.05■□□□□ 0.32
CLSTN3-214ENST00000542663 C2orf73Q8N5S3 287 aaPredicted RBP17.05■□□□□ 0.32
CLSTN3-214ENST00000542663 DENND1AQ8TEH3 1009 aa17.05■□□□□ 0.32
CLSTN3-214ENST00000542663 PSMF1Q92530 271 aa17.05■□□□□ 0.32
CLSTN3-214ENST00000542663 LURAP1Q96LR2 239 aa17.05■□□□□ 0.32
CLSTN3-214ENST00000542663 SPATA13Q96N96 652 aa17.05■□□□□ 0.32
CLSTN3-214ENST00000542663 ZNF285Q96NJ3 590 aa17.05■□□□□ 0.32
CLSTN3-214ENST00000542663 ANP32EQ9BTT0 268 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms