RNA–Protein interactions for RNA: ENST00000541817.5

CHFR-220, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-220ENST00000541817 WASH2PQ6VEQ5 465 aa9.39□□□□□ -0.91
CHFR-220ENST00000541817 FAM83HQ6ZRV2 1179 aaPredicted RBP9.39□□□□□ -0.91
CHFR-220ENST00000541817 CDHR3Q6ZTQ4 885 aa9.39□□□□□ -0.91
CHFR-220ENST00000541817 CEP128Q6ZU80 1094 aa9.39□□□□□ -0.91
CHFR-220ENST00000541817 ARCQ7LC44 396 aa9.39□□□□□ -0.91
CHFR-220ENST00000541817 C11orf96Q7Z7L8 435 aa9.39□□□□□ -0.91
CHFR-220ENST00000541817 CROCCP2Q86T23 111 aa9.39□□□□□ -0.91
CHFR-220ENST00000541817 TAB3Q8N5C8 712 aaPredicted RBP9.39□□□□□ -0.91
CHFR-220ENST00000541817 OR4E2Q8NGC2 313 aa9.39□□□□□ -0.91
CHFR-220ENST00000541817 TIMM29Q9BSF4 260 aa9.39□□□□□ -0.91
CHFR-220ENST00000541817 SOX17Q9H6I2 414 aaPredicted RBP9.39□□□□□ -0.91
CHFR-220ENST00000541817 ZNF395Q9H8N7 513 aaPredicted RBP9.39□□□□□ -0.91
CHFR-220ENST00000541817 TMBIM4Q9HC24 238 aa9.39□□□□□ -0.91
CHFR-220ENST00000541817 SLC22A11Q9NSA0 550 aa9.39□□□□□ -0.91
CHFR-220ENST00000541817 MTRF1LQ9UGC7 380 aaKnown RBP9.39□□□□□ -0.91
CHFR-220ENST00000541817 PPT2Q9UMR5 302 aa9.39□□□□□ -0.91
CHFR-220ENST00000541817 ZNF835Q9Y2P0 537 aa9.39□□□□□ -0.91
CHFR-220ENST00000541817 C17orf113A0A1B0GUU1 675 aa9.38□□□□□ -0.91
CHFR-220ENST00000541817 FOXO6A8MYZ6 492 aa9.38□□□□□ -0.91
CHFR-220ENST00000541817 NPIPA5E9PKD4 350 aa9.38□□□□□ -0.91
CHFR-220ENST00000541817 EEF2KO00418 725 aaKnown RBP9.38□□□□□ -0.91
CHFR-220ENST00000541817 ADAM10O14672 748 aa9.38□□□□□ -0.91
CHFR-220ENST00000541817 CDK14O94921 469 aa9.38□□□□□ -0.91
CHFR-220ENST00000541817 PEX11BO96011 259 aa9.38□□□□□ -0.91
CHFR-220ENST00000541817 CELA2AP08217 269 aa9.38□□□□□ -0.91
CHFR-220ENST00000541817 HBQ1P09105 142 aa9.38□□□□□ -0.91
CHFR-220ENST00000541817 MMP11P24347 488 aa9.38□□□□□ -0.91
CHFR-220ENST00000541817 EIF3BP55884 814 aaKnown RBP9.38□□□□□ -0.91
CHFR-220ENST00000541817 DHX9Q08211 1270 aaKnown RBP9.38□□□□□ -0.91
CHFR-220ENST00000541817 IFFO1Q0D2I5 559 aa9.38□□□□□ -0.91
CHFR-220ENST00000541817 PCOLCEQ15113 449 aa9.38□□□□□ -0.91
CHFR-220ENST00000541817 TRADDQ15628 312 aa9.38□□□□□ -0.91
CHFR-220ENST00000541817 INAQ16352 499 aa9.38□□□□□ -0.91
CHFR-220ENST00000541817 NKAIN1Q4KMZ8 207 aa9.38□□□□□ -0.91
CHFR-220ENST00000541817 DNAJC21Q5F1R6 531 aaKnown RBP9.38□□□□□ -0.91
CHFR-220ENST00000541817 Q6ZPB1 254 aaPredicted RBP9.38□□□□□ -0.91
CHFR-220ENST00000541817 TRAPPC5Q8IUR0 188 aa9.38□□□□□ -0.91
CHFR-220ENST00000541817 GPR135Q8IZ08 494 aa9.38□□□□□ -0.91
CHFR-220ENST00000541817 NDUFAF2Q8N183 169 aa9.38□□□□□ -0.91
CHFR-220ENST00000541817 CIARTQ8N365 385 aaPredicted RBP9.38□□□□□ -0.91
CHFR-220ENST00000541817 ZNF655Q8N720 491 aaPredicted RBP9.38□□□□□ -0.91
CHFR-220ENST00000541817 GPR26Q8NDV2 337 aa9.38□□□□□ -0.91
CHFR-220ENST00000541817 BRIX1Q8TDN6 353 aaKnown RBP9.38□□□□□ -0.91
CHFR-220ENST00000541817 MAGOHBQ96A72 148 aaKnown RBP9.38□□□□□ -0.91
CHFR-220ENST00000541817 ALPK1Q96QP1 1244 aa9.38□□□□□ -0.91
CHFR-220ENST00000541817 INSM2Q96T92 566 aaPredicted RBP9.38□□□□□ -0.91
CHFR-220ENST00000541817 FMO2Q99518 471 aa9.38□□□□□ -0.91
CHFR-220ENST00000541817 MGME1Q9BQP7 344 aa9.38□□□□□ -0.91
CHFR-220ENST00000541817 GPATCH1Q9BRR8 931 aaKnown RBP9.38□□□□□ -0.91
CHFR-220ENST00000541817 ERP44Q9BS26 406 aa9.38□□□□□ -0.91
CHFR-220ENST00000541817 FAM129AQ9BZQ8 928 aa9.38□□□□□ -0.91
CHFR-220ENST00000541817 DHX35Q9H5Z1 703 aaKnown RBP9.38□□□□□ -0.91
CHFR-220ENST00000541817 ZFYVE1Q9HBF4 777 aa9.38□□□□□ -0.91
CHFR-220ENST00000541817 ZNF160Q9HCG1 818 aa9.38□□□□□ -0.91
CHFR-220ENST00000541817 FAM60AQ9NP50 221 aa9.38□□□□□ -0.91
CHFR-220ENST00000541817 NT5MQ9NPB1 228 aa9.38□□□□□ -0.91
CHFR-220ENST00000541817 PKD2L2Q9NZM6 624 aa9.38□□□□□ -0.91
CHFR-220ENST00000541817 RSPH14Q9UHP6 348 aa9.38□□□□□ -0.91
CHFR-220ENST00000541817 NPIPA1Q9UND3 350 aa9.38□□□□□ -0.91
CHFR-220ENST00000541817 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.38□□□□□ -0.91
CHFR-220ENST00000541817 PCDHA3Q9Y5H8 950 aa9.38□□□□□ -0.91
CHFR-220ENST00000541817 STAB1Q9NY15 2570 aa9.38□□□□□ -0.91
CHFR-220ENST00000541817 EBAG9O00559 213 aa9.37□□□□□ -0.91
CHFR-220ENST00000541817 EIF3HO15372 352 aaKnown RBP eCLIP9.37□□□□□ -0.91
CHFR-220ENST00000541817 OR2B3O76000 313 aa9.37□□□□□ -0.91
CHFR-220ENST00000541817 WDPCPO95876 746 aa9.37□□□□□ -0.91
CHFR-220ENST00000541817 PYGMP11217 842 aa9.37□□□□□ -0.91
CHFR-220ENST00000541817 KRT3P12035 628 aa9.37□□□□□ -0.91
CHFR-220ENST00000541817 ALAS2P22557 587 aa9.37□□□□□ -0.91
CHFR-220ENST00000541817 CETN2P41208 172 aa9.37□□□□□ -0.91
CHFR-220ENST00000541817 SLC1A1P43005 524 aa9.37□□□□□ -0.91
CHFR-220ENST00000541817 DSC2Q02487 901 aa9.37□□□□□ -0.91
CHFR-220ENST00000541817 TFF3Q07654 80 aa9.37□□□□□ -0.91
CHFR-220ENST00000541817 XRCC4Q13426 336 aa9.37□□□□□ -0.91
CHFR-220ENST00000541817 OLIG2Q13516 323 aa9.37□□□□□ -0.91
CHFR-220ENST00000541817 NFE2L1Q14494 772 aa9.37□□□□□ -0.91
CHFR-220ENST00000541817 FAM182AQ5T1J6 154 aa9.37□□□□□ -0.91
CHFR-220ENST00000541817 DUPD1Q68J44 220 aa9.37□□□□□ -0.91
CHFR-220ENST00000541817 RHBDD2Q6NTF9 364 aa9.37□□□□□ -0.91
CHFR-220ENST00000541817 CHSY3Q70JA7 882 aa9.37□□□□□ -0.91
CHFR-220ENST00000541817 DOLPP1Q86YN1 238 aa9.37□□□□□ -0.91
CHFR-220ENST00000541817 ZZZ3Q8IYH5 903 aa9.37□□□□□ -0.91
CHFR-220ENST00000541817 LPCAT1Q8NF37 534 aa9.37□□□□□ -0.91
CHFR-220ENST00000541817 SPDYE1Q8NFV5 336 aaPredicted RBP9.37□□□□□ -0.91
CHFR-220ENST00000541817 OR11G2Q8NGC1 345 aa9.37□□□□□ -0.91
CHFR-220ENST00000541817 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.37□□□□□ -0.91
CHFR-220ENST00000541817 PSMF1Q92530 271 aa9.37□□□□□ -0.91
CHFR-220ENST00000541817 ALG3Q92685 438 aa9.37□□□□□ -0.91
CHFR-220ENST00000541817 N4BP2L2Q92802 583 aaPredicted RBP9.37□□□□□ -0.91
CHFR-220ENST00000541817 GLYATL1Q969I3 302 aa9.37□□□□□ -0.91
CHFR-220ENST00000541817 C8orf44Q96CB5 159 aa9.37□□□□□ -0.91
CHFR-220ENST00000541817 EID2BQ96D98 161 aa9.37□□□□□ -0.91
CHFR-220ENST00000541817 DMRTA2Q96SC8 542 aa9.37□□□□□ -0.91
CHFR-220ENST00000541817 KCTD15Q96SI1 283 aaPredicted RBP9.37□□□□□ -0.91
CHFR-220ENST00000541817 C17orf62Q9BQA9 187 aa9.37□□□□□ -0.91
CHFR-220ENST00000541817 TRIM51Q9BSJ1 452 aa9.37□□□□□ -0.91
CHFR-220ENST00000541817 TRIM31Q9BZY9 425 aa9.37□□□□□ -0.91
CHFR-220ENST00000541817 CENPHQ9H3R5 247 aa9.37□□□□□ -0.91
CHFR-220ENST00000541817 COQ3Q9NZJ6 369 aa9.37□□□□□ -0.91
CHFR-220ENST00000541817 FAM8A1Q9UBU6 413 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms