RNA–Protein interactions for RNA: ENST00000541204.5

RNF4-222, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 2,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-222ENST00000541204 ZNF821O75541 412 aaPredicted RBP12.23□□□□□ -0.45
RNF4-222ENST00000541204 RFPL2O75678 378 aa12.23□□□□□ -0.45
RNF4-222ENST00000541204 SULT1C4O75897 302 aa12.23□□□□□ -0.45
RNF4-222ENST00000541204 HPRP00739 348 aa12.23□□□□□ -0.45
RNF4-222ENST00000541204 JAK1P23458 1154 aa12.23□□□□□ -0.45
RNF4-222ENST00000541204 PHEXP78562 749 aa12.23□□□□□ -0.45
RNF4-222ENST00000541204 PPP2R2BQ00005 443 aa12.23□□□□□ -0.45
RNF4-222ENST00000541204 NFATC2Q13469 925 aa12.23□□□□□ -0.45
RNF4-222ENST00000541204 AQP6Q13520 282 aa12.23□□□□□ -0.45
RNF4-222ENST00000541204 FAM174BQ3ZCQ3 159 aa12.23□□□□□ -0.45
RNF4-222ENST00000541204 TMEM25Q86YD3 366 aa12.23□□□□□ -0.45
RNF4-222ENST00000541204 ZNF548Q8NEK5 533 aaPredicted RBP12.23□□□□□ -0.45
RNF4-222ENST00000541204 CHPT1Q8WUD6 406 aa12.23□□□□□ -0.45
RNF4-222ENST00000541204 GTF2H4Q92759 462 aa12.23□□□□□ -0.45
RNF4-222ENST00000541204 RAD21L1Q9H4I0 556 aa12.23□□□□□ -0.45
RNF4-222ENST00000541204 ZDHHC6Q9H6R6 413 aa12.23□□□□□ -0.45
RNF4-222ENST00000541204 ACTR8Q9H981 624 aa12.23□□□□□ -0.45
RNF4-222ENST00000541204 NUDT4Q9NZJ9 180 aa12.23□□□□□ -0.45
RNF4-222ENST00000541204 GNPTGQ9UJJ9 305 aa12.23□□□□□ -0.45
RNF4-222ENST00000541204 C16orf96A6NNT2 1141 aa12.23□□□□□ -0.45
RNF4-222ENST00000541204 NEDD8-MDP1E9PL57 170 aa12.23□□□□□ -0.45
RNF4-222ENST00000541204 H7C0S8 307 aa12.23□□□□□ -0.45
RNF4-222ENST00000541204 GFRA2O00451 464 aa12.23□□□□□ -0.45
RNF4-222ENST00000541204 PRKD3O94806 890 aa12.23□□□□□ -0.45
RNF4-222ENST00000541204 ZNF7P17097 686 aaPredicted RBP12.23□□□□□ -0.45
RNF4-222ENST00000541204 HTR1BP28222 390 aa12.23□□□□□ -0.45
RNF4-222ENST00000541204 HLA-FP30511 346 aa12.23□□□□□ -0.45
RNF4-222ENST00000541204 HSPA7P48741 367 aa12.23□□□□□ -0.45
RNF4-222ENST00000541204 BCAP31P51572 246 aa12.23□□□□□ -0.45
RNF4-222ENST00000541204 CLCN4P51793 760 aa12.23□□□□□ -0.45
RNF4-222ENST00000541204 RAB15P59190 212 aa12.23□□□□□ -0.45
RNF4-222ENST00000541204 CYP4F3Q08477 520 aa12.23□□□□□ -0.45
RNF4-222ENST00000541204 CD47Q08722 323 aa12.23□□□□□ -0.45
RNF4-222ENST00000541204 LAIR2Q6ISS4 152 aa12.23□□□□□ -0.45
RNF4-222ENST00000541204 MILR1Q7Z6M3 343 aa12.23□□□□□ -0.45
RNF4-222ENST00000541204 TMEM179BQ7Z7N9 219 aa12.23□□□□□ -0.45
RNF4-222ENST00000541204 IGFN1Q86VF2 1251 aa12.23□□□□□ -0.45
RNF4-222ENST00000541204 TMC8Q8IU68 726 aa12.23□□□□□ -0.45
RNF4-222ENST00000541204 KREMEN2Q8NCW0 462 aa12.23□□□□□ -0.45
RNF4-222ENST00000541204 FAM162AQ96A26 154 aa12.23□□□□□ -0.45
RNF4-222ENST00000541204 FKBP10Q96AY3 582 aa12.23□□□□□ -0.45
RNF4-222ENST00000541204 CCDC115Q96NT0 180 aa12.23□□□□□ -0.45
RNF4-222ENST00000541204 EGFL8Q99944 293 aa12.23□□□□□ -0.45
RNF4-222ENST00000541204 ATP13A3Q9H7F0 1226 aa12.23□□□□□ -0.45
RNF4-222ENST00000541204 ZFP14Q9HCL3 533 aa12.23□□□□□ -0.45
RNF4-222ENST00000541204 FARSBQ9NSD9 589 aaKnown RBP12.23□□□□□ -0.45
RNF4-222ENST00000541204 KIAA1522Q9P206 1035 aaPredicted RBP12.23□□□□□ -0.45
RNF4-222ENST00000541204 CD84Q9UIB8 345 aa12.23□□□□□ -0.45
RNF4-222ENST00000541204 SLCO3A1Q9UIG8 710 aa12.23□□□□□ -0.45
RNF4-222ENST00000541204 U3KQV3 271 aa12.23□□□□□ -0.45
RNF4-222ENST00000541204 GLYATL1P3A0A0U1RQE8 302 aa12.22□□□□□ -0.45
RNF4-222ENST00000541204 HIDE1A8MVS5 230 aa12.22□□□□□ -0.45
RNF4-222ENST00000541204 AXIN1O15169 862 aa12.22□□□□□ -0.45
RNF4-222ENST00000541204 HS6ST1O60243 411 aa12.22□□□□□ -0.45
RNF4-222ENST00000541204 BCAS1O75363 584 aaPredicted RBP12.22□□□□□ -0.45
RNF4-222ENST00000541204 WEE1P30291 646 aa12.22□□□□□ -0.45
RNF4-222ENST00000541204 HMGCS1Q01581 520 aa12.22□□□□□ -0.45
RNF4-222ENST00000541204 TRAF3Q13114 568 aa12.22□□□□□ -0.45
RNF4-222ENST00000541204 PCBP2Q15366 365 aaKnown RBP eCLIP12.22□□□□□ -0.45
RNF4-222ENST00000541204 MAPKAPK3Q16644 382 aa12.22□□□□□ -0.45
RNF4-222ENST00000541204 RGS21Q2M5E4 152 aa12.22□□□□□ -0.45
RNF4-222ENST00000541204 MPPE1Q53F39 396 aa12.22□□□□□ -0.45
RNF4-222ENST00000541204 CRTC3Q6UUV7 619 aa12.22□□□□□ -0.45
RNF4-222ENST00000541204 SBSNQ6UWP8 590 aa12.22□□□□□ -0.45
RNF4-222ENST00000541204 PIWIL3Q7Z3Z3 882 aaKnown RBP12.22□□□□□ -0.45
RNF4-222ENST00000541204 BTLAQ7Z6A9 289 aa12.22□□□□□ -0.45
RNF4-222ENST00000541204 PHACTR4Q8IZ21 702 aa12.22□□□□□ -0.45
RNF4-222ENST00000541204 ADGRG2Q8IZP9 1017 aa12.22□□□□□ -0.45
RNF4-222ENST00000541204 AADATQ8N5Z0 425 aa12.22□□□□□ -0.45
RNF4-222ENST00000541204 FRS2Q8WU20 508 aa12.22□□□□□ -0.45
RNF4-222ENST00000541204 ASIC4Q96FT7 647 aa12.22□□□□□ -0.45
RNF4-222ENST00000541204 MAGED4Q96JG8 741 aa12.22□□□□□ -0.45
RNF4-222ENST00000541204 ZBP1Q9H171 429 aa12.22□□□□□ -0.45
RNF4-222ENST00000541204 PALMDQ9NP74 551 aa12.22□□□□□ -0.45
RNF4-222ENST00000541204 SLC25A37Q9NYZ2 338 aa12.22□□□□□ -0.45
RNF4-222ENST00000541204 BAG5Q9UL15 447 aa12.22□□□□□ -0.45
RNF4-222ENST00000541204 ERGIC3Q9Y282 383 aa12.22□□□□□ -0.45
RNF4-222ENST00000541204 DHRS7Q9Y394 339 aa12.22□□□□□ -0.45
RNF4-222ENST00000541204 CCL27Q9Y4X3 112 aa12.22□□□□□ -0.45
RNF4-222ENST00000541204 SOBPA7XYQ1 873 aa12.22□□□□□ -0.45
RNF4-222ENST00000541204 IFRD1O00458 451 aaPredicted RBP12.22□□□□□ -0.45
RNF4-222ENST00000541204 FFAR2O15552 330 aa12.22□□□□□ -0.45
RNF4-222ENST00000541204 MAN1A2O60476 641 aa12.22□□□□□ -0.45
RNF4-222ENST00000541204 LILRB3O75022 631 aa12.22□□□□□ -0.45
RNF4-222ENST00000541204 INMTO95050 263 aa12.22□□□□□ -0.45
RNF4-222ENST00000541204 LATS1O95835 1130 aa12.22□□□□□ -0.45
RNF4-222ENST00000541204 IGSF6O95976 241 aa12.22□□□□□ -0.45
RNF4-222ENST00000541204 ITGALP20701 1170 aa12.22□□□□□ -0.45
RNF4-222ENST00000541204 OPRL1P41146 370 aa12.22□□□□□ -0.45
RNF4-222ENST00000541204 SFSWAPQ12872 951 aaKnown RBP12.22□□□□□ -0.45
RNF4-222ENST00000541204 PHKG1Q16816 387 aa12.22□□□□□ -0.45
RNF4-222ENST00000541204 GTDC1Q4AE62 458 aa12.22□□□□□ -0.45
RNF4-222ENST00000541204 SPANXN4Q5MJ08 99 aa12.22□□□□□ -0.45
RNF4-222ENST00000541204 PLPP4Q5VZY2 271 aa12.22□□□□□ -0.45
RNF4-222ENST00000541204 EGFLAMQ63HQ2 1017 aa12.22□□□□□ -0.45
RNF4-222ENST00000541204 MBOAT1Q6ZNC8 495 aa12.22□□□□□ -0.45
RNF4-222ENST00000541204 SLC16A12Q6ZSM3 486 aa12.22□□□□□ -0.45
RNF4-222ENST00000541204 HTR3DQ70Z44 454 aa12.22□□□□□ -0.45
RNF4-222ENST00000541204 DET1Q7L5Y6 550 aa12.22□□□□□ -0.45
RNF4-222ENST00000541204 MSRB3Q8IXL7 192 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms