RNA–Protein interactions for RNA: ENST00000541169.1

VPS33A-205, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-205ENST00000541169 AENQ8WTP8 325 aaKnown RBP18.17■□□□□ 0.5
VPS33A-205ENST00000541169 CABS1Q96KC9 395 aa18.17■□□□□ 0.5
VPS33A-205ENST00000541169 ZPBPQ9BS86 351 aa18.17■□□□□ 0.5
VPS33A-205ENST00000541169 DHRS4Q9BTZ2 278 aa18.17■□□□□ 0.5
VPS33A-205ENST00000541169 PCBD2Q9H0N5 130 aa18.17■□□□□ 0.5
VPS33A-205ENST00000541169 NMRAL1Q9HBL8 299 aa18.17■□□□□ 0.5
VPS33A-205ENST00000541169 DKK4Q9UBT3 224 aa18.17■□□□□ 0.5
VPS33A-205ENST00000541169 CTNNAL1Q9UBT7 734 aa18.17■□□□□ 0.5
VPS33A-205ENST00000541169 IQANK1A0A1B0GTG1 560 aa18.16■□□□□ 0.5
VPS33A-205ENST00000541169 CCNDBP1O95273 360 aa18.16■□□□□ 0.5
VPS33A-205ENST00000541169 MSL3P1P0C860 447 aa18.16■□□□□ 0.5
VPS33A-205ENST00000541169 CCDC166P0CW27 439 aa18.16■□□□□ 0.5
VPS33A-205ENST00000541169 COL6A2P12110 1019 aa18.16■□□□□ 0.5
VPS33A-205ENST00000541169 NELFEP18615 380 aaKnown RBP18.16■□□□□ 0.5
VPS33A-205ENST00000541169 CDH3P22223 829 aa18.16■□□□□ 0.5
VPS33A-205ENST00000541169 RBMS1P29558 406 aaKnown RBP18.16■□□□□ 0.5
VPS33A-205ENST00000541169 BDKRB1P46663 353 aa18.16■□□□□ 0.5
VPS33A-205ENST00000541169 HNMTP50135 292 aa18.16■□□□□ 0.5
VPS33A-205ENST00000541169 GFERP55789 205 aa18.16■□□□□ 0.5
VPS33A-205ENST00000541169 FAM83EQ2M2I3 478 aa18.16■□□□□ 0.5
VPS33A-205ENST00000541169 EEF1AKMT2Q5JPI9 291 aaKnown RBP18.16■□□□□ 0.5
VPS33A-205ENST00000541169 FBXO38Q6PIJ6 1188 aa18.16■□□□□ 0.5
VPS33A-205ENST00000541169 LCA5Q86VQ0 697 aa18.16■□□□□ 0.5
VPS33A-205ENST00000541169 GSPT2Q8IYD1 628 aaKnown RBP18.16■□□□□ 0.5
VPS33A-205ENST00000541169 DCAKDQ8WVC6 231 aa18.16■□□□□ 0.5
VPS33A-205ENST00000541169 JPH3Q8WXH2 748 aaPredicted RBP18.16■□□□□ 0.5
VPS33A-205ENST00000541169 ISL2Q96A47 359 aa18.16■□□□□ 0.5
VPS33A-205ENST00000541169 SLC41A2Q96JW4 573 aa18.16■□□□□ 0.5
VPS33A-205ENST00000541169 TEFMQ96QE5 360 aaKnown RBP18.16■□□□□ 0.5
VPS33A-205ENST00000541169 PKP4Q99569 1192 aa18.16■□□□□ 0.5
VPS33A-205ENST00000541169 ASPSCR1Q9BZE9 553 aa18.16■□□□□ 0.5
VPS33A-205ENST00000541169 XKR8Q9H6D3 395 aa18.16■□□□□ 0.5
VPS33A-205ENST00000541169 FBXO8Q9NRD0 319 aa18.16■□□□□ 0.5
VPS33A-205ENST00000541169 UTP6Q9NYH9 597 aaKnown RBP18.16■□□□□ 0.5
VPS33A-205ENST00000541169 TMEM9Q9P0T7 183 aa18.16■□□□□ 0.5
VPS33A-205ENST00000541169 PSMC3IPQ9P2W1 217 aaPredicted RBP18.16■□□□□ 0.5
VPS33A-205ENST00000541169 RUVBL2Q9Y230 463 aaKnown RBP18.16■□□□□ 0.5
VPS33A-205ENST00000541169 PDE10AQ9Y233 779 aa18.16■□□□□ 0.5
VPS33A-205ENST00000541169 LOXL2Q9Y4K0 774 aa18.16■□□□□ 0.5
VPS33A-205ENST00000541169 PCDHB11Q9Y5F2 797 aa18.16■□□□□ 0.5
VPS33A-205ENST00000541169 SPTBN2O15020 2390 aa18.15■□□□□ 0.5
VPS33A-205ENST00000541169 TMEM8BA6NDV4 472 aa18.15■□□□□ 0.5
VPS33A-205ENST00000541169 TRABD2BA6NFA1 517 aa18.15■□□□□ 0.5
VPS33A-205ENST00000541169 ISM1B1AKI9 464 aa18.15■□□□□ 0.5
VPS33A-205ENST00000541169 ERLIN1O75477 346 aa18.15■□□□□ 0.5
VPS33A-205ENST00000541169 SLC16A8O95907 504 aa18.15■□□□□ 0.5
VPS33A-205ENST00000541169 SYF2O95926 243 aaKnown RBP18.15■□□□□ 0.5
VPS33A-205ENST00000541169 TOP3BO95985 862 aaKnown RBP18.15■□□□□ 0.5
VPS33A-205ENST00000541169 MPOP05164 745 aa18.15■□□□□ 0.5
VPS33A-205ENST00000541169 LTA4HP09960 611 aaKnown RBP18.15■□□□□ 0.5
VPS33A-205ENST00000541169 OAS2P29728 719 aaKnown RBP18.15■□□□□ 0.5
VPS33A-205ENST00000541169 KPNA2P52292 529 aaKnown RBP18.15■□□□□ 0.5
VPS33A-205ENST00000541169 PNLIPRP1P54315 467 aa18.15■□□□□ 0.5
VPS33A-205ENST00000541169 ERVPABLB-1P60509 514 aa18.15■□□□□ 0.5
VPS33A-205ENST00000541169 IL11RAQ14626 422 aa18.15■□□□□ 0.5
VPS33A-205ENST00000541169 SNAP47Q5SQN1 464 aa18.15■□□□□ 0.5
VPS33A-205ENST00000541169 KLC3Q6P597 504 aa18.15■□□□□ 0.5
VPS33A-205ENST00000541169 TMEM207Q6UWW9 146 aa18.15■□□□□ 0.5
VPS33A-205ENST00000541169 FAM92BQ6ZTR7 304 aa18.15■□□□□ 0.5
VPS33A-205ENST00000541169 MREGQ8N565 214 aa18.15■□□□□ 0.5
VPS33A-205ENST00000541169 OR8K5Q8NH50 307 aa18.15■□□□□ 0.5
VPS33A-205ENST00000541169 MRRFQ96E11 262 aaKnown RBP18.15■□□□□ 0.5
VPS33A-205ENST00000541169 TCTN2Q96GX1 697 aa18.15■□□□□ 0.5
VPS33A-205ENST00000541169 OR2A14Q96R47 310 aa18.15■□□□□ 0.5
VPS33A-205ENST00000541169 CAB39LQ9H9S4 337 aa18.15■□□□□ 0.5
VPS33A-205ENST00000541169 SNX15Q9NRS6 342 aa18.15■□□□□ 0.5
VPS33A-205ENST00000541169 THSD1Q9NS62 852 aa18.15■□□□□ 0.5
VPS33A-205ENST00000541169 ARL15Q9NXU5 204 aa18.15■□□□□ 0.5
VPS33A-205ENST00000541169 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.15■□□□□ 0.5
VPS33A-205ENST00000541169 KLHL3Q9UH77 587 aa18.15■□□□□ 0.5
VPS33A-205ENST00000541169 TSR3Q9UJK0 312 aaKnown RBP18.15■□□□□ 0.5
VPS33A-205ENST00000541169 SATB2Q9UPW6 733 aa18.15■□□□□ 0.5
VPS33A-205ENST00000541169 BTRCQ9Y297 605 aa18.15■□□□□ 0.5
VPS33A-205ENST00000541169 AK5Q9Y6K8 562 aa18.15■□□□□ 0.5
VPS33A-205ENST00000541169 V9GYY5 206 aaPredicted RBP18.15■□□□□ 0.5
VPS33A-205ENST00000541169 A0A0J9YY10 115 aa18.14■□□□□ 0.49
VPS33A-205ENST00000541169 TARM1B6A8C7 271 aa18.14■□□□□ 0.49
VPS33A-205ENST00000541169 CASC3O15234 703 aaKnown RBP18.14■□□□□ 0.49
VPS33A-205ENST00000541169 NUDT17P0C025 328 aa18.14■□□□□ 0.49
VPS33A-205ENST00000541169 SLC35E2BP0CK96 405 aa18.14■□□□□ 0.49
VPS33A-205ENST00000541169 UGT2B7P16662 529 aa18.14■□□□□ 0.49
VPS33A-205ENST00000541169 HRH2P25021 359 aa18.14■□□□□ 0.49
VPS33A-205ENST00000541169 CLDN6P56747 220 aa18.14■□□□□ 0.49
VPS33A-205ENST00000541169 GABREP78334 506 aa18.14■□□□□ 0.49
VPS33A-205ENST00000541169 ABATP80404 500 aa18.14■□□□□ 0.49
VPS33A-205ENST00000541169 MC2RQ01718 297 aa18.14■□□□□ 0.49
VPS33A-205ENST00000541169 ACY1Q03154 408 aa18.14■□□□□ 0.49
VPS33A-205ENST00000541169 C16orf72Q14CZ0 275 aa18.14■□□□□ 0.49
VPS33A-205ENST00000541169 C3orf38Q5JPI3 329 aa18.14■□□□□ 0.49
VPS33A-205ENST00000541169 TIFABQ6ZNK6 161 aa18.14■□□□□ 0.49
VPS33A-205ENST00000541169 FRA10AC1Q70Z53 315 aa18.14■□□□□ 0.49
VPS33A-205ENST00000541169 TDRPQ86YL5 185 aa18.14■□□□□ 0.49
VPS33A-205ENST00000541169 SYTL1Q8IYJ3 562 aa18.14■□□□□ 0.49
VPS33A-205ENST00000541169 TCAIMQ8N3R3 496 aa18.14■□□□□ 0.49
VPS33A-205ENST00000541169 D2HGDHQ8N465 521 aa18.14■□□□□ 0.49
VPS33A-205ENST00000541169 LMNTD1Q8N9Z9 388 aa18.14■□□□□ 0.49
VPS33A-205ENST00000541169 LINC01555Q8NAE3 123 aa18.14■□□□□ 0.49
VPS33A-205ENST00000541169 RCBTB1Q8NDN9 531 aa18.14■□□□□ 0.49
VPS33A-205ENST00000541169 UHMK1Q8TAS1 419 aaKnown RBP18.14■□□□□ 0.49
VPS33A-205ENST00000541169 STAG3L4Q8TBR4 150 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms