RNA–Protein interactions for RNA: ENST00000540037.5

SCNN1A-215, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 1 (best) BASIC

Gene SCNN1A, Length 3,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-215ENST00000540037 MAD2L1BPQ15013 274 aaPredicted RBP13.6□□□□□ -0.23
SCNN1A-215ENST00000540037 FAM171A1Q5VUB5 890 aa13.6□□□□□ -0.23
SCNN1A-215ENST00000540037 CAPN13Q6MZZ7 669 aaPredicted RBP13.6□□□□□ -0.23
SCNN1A-215ENST00000540037 MON1AQ86VX9 555 aa13.6□□□□□ -0.23
SCNN1A-215ENST00000540037 DNASE1L2Q92874 299 aa13.6□□□□□ -0.23
SCNN1A-215ENST00000540037 SERHLQ9NQF3 203 aa13.6□□□□□ -0.23
SCNN1A-215ENST00000540037 GPRC5BQ9NZH0 403 aa13.6□□□□□ -0.23
SCNN1A-215ENST00000540037 ZNF490Q9ULM2 529 aaPredicted RBP13.6□□□□□ -0.23
SCNN1A-215ENST00000540037 EIF3LQ9Y262 564 aaKnown RBP13.6□□□□□ -0.23
SCNN1A-215ENST00000540037 ZNF451Q9Y4E5 1061 aa13.6□□□□□ -0.23
SCNN1A-215ENST00000540037 GREB1Q4ZG55 1949 aa13.6□□□□□ -0.23
SCNN1A-215ENST00000540037 TRBV5-3A0A0A0MS03 114 aa13.6□□□□□ -0.23
SCNN1A-215ENST00000540037 RECQL5O94762 991 aaPredicted RBP13.6□□□□□ -0.23
SCNN1A-215ENST00000540037 EPOP01588 193 aa13.6□□□□□ -0.23
SCNN1A-215ENST00000540037 HOXD9P28356 352 aaPredicted RBP13.6□□□□□ -0.23
SCNN1A-215ENST00000540037 KCNQ1P51787 676 aa13.6□□□□□ -0.23
SCNN1A-215ENST00000540037 HNRNPFP52597 415 aaKnown RBP13.6□□□□□ -0.23
SCNN1A-215ENST00000540037 GRB14Q14449 540 aa13.6□□□□□ -0.23
SCNN1A-215ENST00000540037 C10orf120Q5SQS8 335 aa13.6□□□□□ -0.23
SCNN1A-215ENST00000540037 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.6□□□□□ -0.23
SCNN1A-215ENST00000540037 CLDN19Q8N6F1 224 aa13.6□□□□□ -0.23
SCNN1A-215ENST00000540037 ATAD1Q8NBU5 361 aa13.6□□□□□ -0.23
SCNN1A-215ENST00000540037 LKAAEAR1Q8TD35 194 aa13.6□□□□□ -0.23
SCNN1A-215ENST00000540037 APH1BQ8WW43 257 aa13.6□□□□□ -0.23
SCNN1A-215ENST00000540037 ATL1Q8WXF7 558 aa13.6□□□□□ -0.23
SCNN1A-215ENST00000540037 FATE1Q969F0 183 aa13.6□□□□□ -0.23
SCNN1A-215ENST00000540037 BOCQ9BWV1 1114 aa13.6□□□□□ -0.23
SCNN1A-215ENST00000540037 TNKS2Q9H2K2 1166 aa13.6□□□□□ -0.23
SCNN1A-215ENST00000540037 CLMPQ9H6B4 373 aa13.6□□□□□ -0.23
SCNN1A-215ENST00000540037 LOC100506127A0A0U1RQW1 187 aa13.59□□□□□ -0.23
SCNN1A-215ENST00000540037 PABPN1LA6NDY0 278 aaKnown RBP13.59□□□□□ -0.23
SCNN1A-215ENST00000540037 C2orf81A6NN90 581 aa13.59□□□□□ -0.23
SCNN1A-215ENST00000540037 AGRPO00253 132 aa13.59□□□□□ -0.23
SCNN1A-215ENST00000540037 NDUFB5O43674 189 aa13.59□□□□□ -0.23
SCNN1A-215ENST00000540037 NUAK1O60285 661 aa13.59□□□□□ -0.23
SCNN1A-215ENST00000540037 TACR1P25103 407 aa13.59□□□□□ -0.23
SCNN1A-215ENST00000540037 COPZ1P61923 177 aa13.59□□□□□ -0.23
SCNN1A-215ENST00000540037 DMPKQ09013 629 aa13.59□□□□□ -0.23
SCNN1A-215ENST00000540037 IL18R1Q13478 541 aa13.59□□□□□ -0.23
SCNN1A-215ENST00000540037 TAF1AQ15573 450 aaPredicted RBP13.59□□□□□ -0.23
SCNN1A-215ENST00000540037 CCL14Q16627 93 aa13.59□□□□□ -0.23
SCNN1A-215ENST00000540037 ZNF404Q494X3 552 aa13.59□□□□□ -0.23
SCNN1A-215ENST00000540037 KDM4DQ6B0I6 523 aa13.59□□□□□ -0.23
SCNN1A-215ENST00000540037 THOC7Q6I9Y2 204 aaKnown RBP13.59□□□□□ -0.23
SCNN1A-215ENST00000540037 THEM5Q8N1Q8 247 aa13.59□□□□□ -0.23
SCNN1A-215ENST00000540037 EGLN2Q96KS0 407 aa13.59□□□□□ -0.23
SCNN1A-215ENST00000540037 PPP3R2Q96LZ3 170 aa13.59□□□□□ -0.23
SCNN1A-215ENST00000540037 TSSK3Q96PN8 268 aa13.59□□□□□ -0.23
SCNN1A-215ENST00000540037 M0QZQ0 153 aa13.59□□□□□ -0.23
SCNN1A-215ENST00000540037 M0R082 166 aa13.59□□□□□ -0.23
SCNN1A-215ENST00000540037 DSCR3O14972 297 aa13.59□□□□□ -0.23
SCNN1A-215ENST00000540037 AIREO43918 545 aa13.59□□□□□ -0.23
SCNN1A-215ENST00000540037 OTCP00480 354 aa13.59□□□□□ -0.23
SCNN1A-215ENST00000540037 GRK3P35626 688 aa13.59□□□□□ -0.23
SCNN1A-215ENST00000540037 MRPS6P82932 125 aaKnown RBP13.59□□□□□ -0.23
SCNN1A-215ENST00000540037 PARP15Q460N3 678 aa13.59□□□□□ -0.23
SCNN1A-215ENST00000540037 ZC3H12BQ5HYM0 836 aaKnown RBP13.59□□□□□ -0.23
SCNN1A-215ENST00000540037 DOK6Q6PKX4 331 aa13.59□□□□□ -0.23
SCNN1A-215ENST00000540037 VASH1Q7L8A9 365 aaPredicted RBP13.59□□□□□ -0.23
SCNN1A-215ENST00000540037 SNX20Q7Z614 316 aa13.59□□□□□ -0.23
SCNN1A-215ENST00000540037 HEATR4Q86WZ0 1026 aa13.59□□□□□ -0.23
SCNN1A-215ENST00000540037 CALHM3Q86XJ0 350 aa13.59□□□□□ -0.23
SCNN1A-215ENST00000540037 SVOPQ8N4V2 548 aa13.59□□□□□ -0.23
SCNN1A-215ENST00000540037 SETD9Q8NE22 299 aa13.59□□□□□ -0.23
SCNN1A-215ENST00000540037 TXNDC15Q96J42 360 aa13.59□□□□□ -0.23
SCNN1A-215ENST00000540037 EGFL8Q99944 293 aa13.59□□□□□ -0.23
SCNN1A-215ENST00000540037 DPH2Q9BQC3 489 aaPredicted RBP13.59□□□□□ -0.23
SCNN1A-215ENST00000540037 CPPED1Q9BRF8 314 aaPredicted RBP13.59□□□□□ -0.23
SCNN1A-215ENST00000540037 NDEL1Q9GZM8 345 aa13.59□□□□□ -0.23
SCNN1A-215ENST00000540037 MARCH2Q9P0N8 246 aa13.59□□□□□ -0.23
SCNN1A-215ENST00000540037 FNIP2Q9P278 1114 aa13.59□□□□□ -0.23
SCNN1A-215ENST00000540037 IFT52Q9Y366 437 aa13.59□□□□□ -0.23
SCNN1A-215ENST00000540037 MYADML2A6NDP7 307 aa13.58□□□□□ -0.23
SCNN1A-215ENST00000540037 AGAP5A6NIR3 686 aa13.58□□□□□ -0.23
SCNN1A-215ENST00000540037 LOC730098B7Z3J9 87 aa13.58□□□□□ -0.23
SCNN1A-215ENST00000540037 H0Y626 953 aa13.58□□□□□ -0.23
SCNN1A-215ENST00000540037 TRIM16O95361 564 aa13.58□□□□□ -0.23
SCNN1A-215ENST00000540037 BCKDHAP12694 445 aa13.58□□□□□ -0.23
SCNN1A-215ENST00000540037 ALOX12P18054 663 aa13.58□□□□□ -0.23
SCNN1A-215ENST00000540037 EFNA1P20827 205 aaPredicted RBP13.58□□□□□ -0.23
SCNN1A-215ENST00000540037 CASP3P42574 277 aa13.58□□□□□ -0.23
SCNN1A-215ENST00000540037 CDC20Q12834 499 aa13.58□□□□□ -0.23
SCNN1A-215ENST00000540037 PCBP2Q15366 365 aaKnown RBP eCLIP13.58□□□□□ -0.23
SCNN1A-215ENST00000540037 ZNF772Q68DY9 489 aaPredicted RBP13.58□□□□□ -0.23
SCNN1A-215ENST00000540037 OR2T5Q6IEZ7 315 aa13.58□□□□□ -0.23
SCNN1A-215ENST00000540037 PLPP6Q8IY26 295 aa13.58□□□□□ -0.23
SCNN1A-215ENST00000540037 ATG16L2Q8NAA4 619 aa13.58□□□□□ -0.23
SCNN1A-215ENST00000540037 OR2T29Q8NH02 315 aa13.58□□□□□ -0.23
SCNN1A-215ENST00000540037 ZNF486Q96H40 463 aaPredicted RBP13.58□□□□□ -0.23
SCNN1A-215ENST00000540037 ZNF408Q9H9D4 720 aa13.58□□□□□ -0.23
SCNN1A-215ENST00000540037 CPNE5Q9HCH3 593 aa13.58□□□□□ -0.23
SCNN1A-215ENST00000540037 ADARB2Q9NS39 739 aaKnown RBP13.58□□□□□ -0.23
SCNN1A-215ENST00000540037 NUDT4Q9NZJ9 180 aa13.58□□□□□ -0.23
SCNN1A-215ENST00000540037 NDRG4Q9ULP0 352 aaKnown RBP13.58□□□□□ -0.23
SCNN1A-215ENST00000540037 IFRD1O00458 451 aaPredicted RBP13.58□□□□□ -0.24
SCNN1A-215ENST00000540037 ASNA1O43681 348 aa13.58□□□□□ -0.24
SCNN1A-215ENST00000540037 LPOP22079 712 aaPredicted RBP13.58□□□□□ -0.24
SCNN1A-215ENST00000540037 S100A1P23297 94 aa13.58□□□□□ -0.24
SCNN1A-215ENST00000540037 CD52P31358 61 aa13.58□□□□□ -0.24
SCNN1A-215ENST00000540037 GNPDA1P46926 289 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms