RNA–Protein interactions for RNA: ENST00000539827.5

HOMER3-204, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-204ENST00000539827 TBC1D3EA0A087X179 549 aa21.81■■□□□ 1.08
HOMER3-204ENST00000539827 TBC1D3KA0A087X1G2 549 aa21.81■■□□□ 1.08
HOMER3-204ENST00000539827 TBC1D3FA6NER0 549 aaPredicted RBP21.81■■□□□ 1.08
HOMER3-204ENST00000539827 TBC1D3LB9A6J9 549 aa21.81■■□□□ 1.08
HOMER3-204ENST00000539827 TBC1D3HP0C7X1 549 aa21.81■■□□□ 1.08
HOMER3-204ENST00000539827 XRCC1P18887 633 aaPredicted RBP21.81■■□□□ 1.08
HOMER3-204ENST00000539827 ADPRHP54922 357 aa21.81■■□□□ 1.08
HOMER3-204ENST00000539827 KCNK10P57789 538 aa21.81■■□□□ 1.08
HOMER3-204ENST00000539827 CCDC85BQ15834 202 aaPredicted RBP21.81■■□□□ 1.08
HOMER3-204ENST00000539827 TBC1D3GQ6DHY5 549 aa21.81■■□□□ 1.08
HOMER3-204ENST00000539827 TBC1D3CQ6IPX1 549 aa21.81■■□□□ 1.08
HOMER3-204ENST00000539827 CYP20A1Q6UW02 462 aa21.81■■□□□ 1.08
HOMER3-204ENST00000539827 TBC1D3Q8IZP1 549 aaPredicted RBP21.81■■□□□ 1.08
HOMER3-204ENST00000539827 FAM131CQ96AQ9 280 aa21.81■■□□□ 1.08
HOMER3-204ENST00000539827 VPS33AQ96AX1 596 aa21.81■■□□□ 1.08
HOMER3-204ENST00000539827 SIPA1Q96FS4 1042 aa21.81■■□□□ 1.08
HOMER3-204ENST00000539827 SLC17A9Q9BYT1 436 aa21.81■■□□□ 1.08
HOMER3-204ENST00000539827 ZDHHC5Q9C0B5 715 aa21.81■■□□□ 1.08
HOMER3-204ENST00000539827 ELOVL6Q9H5J4 265 aa21.81■■□□□ 1.08
HOMER3-204ENST00000539827 FBRSQ9HAH7 460 aa21.81■■□□□ 1.08
HOMER3-204ENST00000539827 ZIM2Q9NZV7 527 aa21.81■■□□□ 1.08
HOMER3-204ENST00000539827 SNX6Q9UNH7 406 aa21.81■■□□□ 1.08
HOMER3-204ENST00000539827 NUMA1Q14980 2115 aa21.81■■□□□ 1.08
HOMER3-204ENST00000539827 XIRP2A4UGR9 3374 aa21.81■■□□□ 1.08
HOMER3-204ENST00000539827 MBTPS2O43462 519 aa21.81■■□□□ 1.08
HOMER3-204ENST00000539827 ACADLP28330 430 aa21.81■■□□□ 1.08
HOMER3-204ENST00000539827 SESN3P58005 492 aa21.81■■□□□ 1.08
HOMER3-204ENST00000539827 MRPS21P82921 87 aaKnown RBP21.81■■□□□ 1.08
HOMER3-204ENST00000539827 IRF8Q02556 426 aa21.81■■□□□ 1.08
HOMER3-204ENST00000539827 MLLT1Q03111 559 aaPredicted RBP21.81■■□□□ 1.08
HOMER3-204ENST00000539827 HACD2Q6Y1H2 254 aa21.81■■□□□ 1.08
HOMER3-204ENST00000539827 PCYOX1LQ8NBM8 494 aa21.81■■□□□ 1.08
HOMER3-204ENST00000539827 OR56A3Q8NH54 315 aa21.81■■□□□ 1.08
HOMER3-204ENST00000539827 OR4K3Q96R72 315 aa21.81■■□□□ 1.08
HOMER3-204ENST00000539827 MYOCQ99972 504 aa21.81■■□□□ 1.08
HOMER3-204ENST00000539827 SLC39A3Q9BRY0 314 aa21.81■■□□□ 1.08
HOMER3-204ENST00000539827 ACPTQ9BZG2 426 aa21.81■■□□□ 1.08
HOMER3-204ENST00000539827 OR52A5Q9H2C5 316 aa21.81■■□□□ 1.08
HOMER3-204ENST00000539827 LRTM1Q9HBL6 345 aa21.81■■□□□ 1.08
HOMER3-204ENST00000539827 FZD3Q9NPG1 666 aa21.81■■□□□ 1.08
HOMER3-204ENST00000539827 NOP53Q9NZM5 478 aaKnown RBP21.81■■□□□ 1.08
HOMER3-204ENST00000539827 PSMD13Q9UNM6 376 aa21.81■■□□□ 1.08
HOMER3-204ENST00000539827 E7EQ34 232 aa21.8■■□□□ 1.08
HOMER3-204ENST00000539827 SEC22BO75396 215 aa21.8■■□□□ 1.08
HOMER3-204ENST00000539827 GNAZP19086 355 aa21.8■■□□□ 1.08
HOMER3-204ENST00000539827 ME2P23368 584 aa21.8■■□□□ 1.08
HOMER3-204ENST00000539827 GNPDA1P46926 289 aa21.8■■□□□ 1.08
HOMER3-204ENST00000539827 POLR2JP52435 117 aaKnown RBP21.8■■□□□ 1.08
HOMER3-204ENST00000539827 PLOD1Q02809 727 aaPredicted RBP21.8■■□□□ 1.08
HOMER3-204ENST00000539827 TSTA3Q13630 321 aaPredicted RBP21.8■■□□□ 1.08
HOMER3-204ENST00000539827 TMEM259Q4ZIN3 620 aa21.8■■□□□ 1.08
HOMER3-204ENST00000539827 XKR6Q5GH73 641 aa21.8■■□□□ 1.08
HOMER3-204ENST00000539827 KIAA1161Q6NSJ0 714 aa21.8■■□□□ 1.08
HOMER3-204ENST00000539827 KLHDC8AQ8IYD2 350 aa21.8■■□□□ 1.08
HOMER3-204ENST00000539827 FBXO15Q8NCQ5 510 aaPredicted RBP21.8■■□□□ 1.08
HOMER3-204ENST00000539827 PHC3Q8NDX5 983 aa21.8■■□□□ 1.08
HOMER3-204ENST00000539827 RPLP0P6Q8NHW5 317 aa21.8■■□□□ 1.08
HOMER3-204ENST00000539827 PROKR1Q8TCW9 393 aa21.8■■□□□ 1.08
HOMER3-204ENST00000539827 ZNF480Q8WV37 535 aa21.8■■□□□ 1.08
HOMER3-204ENST00000539827 NUDT8Q8WV74 236 aa21.8■■□□□ 1.08
HOMER3-204ENST00000539827 DNASE1L2Q92874 299 aa21.8■■□□□ 1.08
HOMER3-204ENST00000539827 TACO1Q9BSH4 297 aaKnown RBP21.8■■□□□ 1.08
HOMER3-204ENST00000539827 DPEP2Q9H4A9 486 aa21.8■■□□□ 1.08
HOMER3-204ENST00000539827 CD93Q9NPY3 652 aa21.8■■□□□ 1.08
HOMER3-204ENST00000539827 JUPP14923 745 aa21.79■■□□□ 1.08
HOMER3-204ENST00000539827 TCN1P20061 433 aaPredicted RBP21.79■■□□□ 1.08
HOMER3-204ENST00000539827 CD22P20273 847 aa21.79■■□□□ 1.08
HOMER3-204ENST00000539827 TRIM23P36406 574 aa21.79■■□□□ 1.08
HOMER3-204ENST00000539827 CCR3P51677 355 aa21.79■■□□□ 1.08
HOMER3-204ENST00000539827 LRIT3Q3SXY7 679 aa21.79■■□□□ 1.08
HOMER3-204ENST00000539827 HORMAD1Q86X24 394 aa21.79■■□□□ 1.08
HOMER3-204ENST00000539827 FAM156AQ8NDB6 213 aa21.79■■□□□ 1.08
HOMER3-204ENST00000539827 OR9A1PQ8NGU1 263 aa21.79■■□□□ 1.08
HOMER3-204ENST00000539827 PHPT1Q9NRX4 125 aaPredicted RBP21.79■■□□□ 1.08
HOMER3-204ENST00000539827 EIF3LQ9Y262 564 aaKnown RBP21.79■■□□□ 1.08
HOMER3-204ENST00000539827 FAM234BA2RU67 622 aa21.79■■□□□ 1.08
HOMER3-204ENST00000539827 ASPDHA6ND91 283 aa21.79■■□□□ 1.08
HOMER3-204ENST00000539827 TRIM38O00635 465 aa21.79■■□□□ 1.08
HOMER3-204ENST00000539827 ANP32DO95626 131 aa21.79■■□□□ 1.08
HOMER3-204ENST00000539827 CD72P21854 359 aa21.79■■□□□ 1.08
HOMER3-204ENST00000539827 PPP2CBP62714 309 aa21.79■■□□□ 1.08
HOMER3-204ENST00000539827 PPP2CAP67775 309 aa21.79■■□□□ 1.08
HOMER3-204ENST00000539827 DOC2AQ14183 400 aa21.79■■□□□ 1.08
HOMER3-204ENST00000539827 C8orf82Q6P1X6 216 aaPredicted RBP21.79■■□□□ 1.08
HOMER3-204ENST00000539827 KIAA1324Q6UXG2 1013 aaKnown RBP21.79■■□□□ 1.08
HOMER3-204ENST00000539827 TMEM92Q6UXU6 159 aa21.79■■□□□ 1.08
HOMER3-204ENST00000539827 SYTL1Q8IYJ3 562 aa21.79■■□□□ 1.08
HOMER3-204ENST00000539827 RNF175Q8N4F7 328 aa21.79■■□□□ 1.08
HOMER3-204ENST00000539827 SLC26A7Q8TE54 656 aa21.79■■□□□ 1.08
HOMER3-204ENST00000539827 ROPN1LQ96C74 230 aa21.79■■□□□ 1.08
HOMER3-204ENST00000539827 ACTL8Q9H568 366 aa21.79■■□□□ 1.08
HOMER3-204ENST00000539827 A0A1W2PP18 115 aa21.78■■□□□ 1.08
HOMER3-204ENST00000539827 CCDC154A6NI56 674 aa21.78■■□□□ 1.08
HOMER3-204ENST00000539827 SLC31A1O15431 190 aa21.78■■□□□ 1.08
HOMER3-204ENST00000539827 RSL1D1O76021 490 aaKnown RBP21.78■■□□□ 1.08
HOMER3-204ENST00000539827 TEAD1P28347 426 aa21.78■■□□□ 1.08
HOMER3-204ENST00000539827 IGFALSP35858 605 aa21.78■■□□□ 1.08
HOMER3-204ENST00000539827 MS4A2Q01362 244 aa21.78■■□□□ 1.08
HOMER3-204ENST00000539827 SMAD4Q13485 552 aaKnown RBP21.78■■□□□ 1.08
HOMER3-204ENST00000539827 RCAN2Q14206 197 aa21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms