RNA–Protein interactions for RNA: ENST00000538838.5

TMEM260-202, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best) BASIC

Gene TMEM260, Length 1,638 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-202ENST00000538838 RDH11Q8TC12 318 aa22.79■■□□□ 1.24
TMEM260-202ENST00000538838 CCDC74AQ96AQ1 378 aa22.79■■□□□ 1.24
TMEM260-202ENST00000538838 SH3KBP1Q96B97 665 aa22.79■■□□□ 1.24
TMEM260-202ENST00000538838 PHF21BQ96EK2 531 aa22.79■■□□□ 1.24
TMEM260-202ENST00000538838 CNDP2Q96KP4 475 aaKnown RBP22.79■■□□□ 1.24
TMEM260-202ENST00000538838 TMEM79Q9BSE2 394 aa22.79■■□□□ 1.24
TMEM260-202ENST00000538838 ATG10Q9H0Y0 220 aa22.79■■□□□ 1.24
TMEM260-202ENST00000538838 UCK1Q9HA47 277 aa22.79■■□□□ 1.24
TMEM260-202ENST00000538838 WWOXQ9NZC7 414 aa22.79■■□□□ 1.24
TMEM260-202ENST00000538838 NCKIPSDQ9NZQ3 722 aa22.79■■□□□ 1.24
TMEM260-202ENST00000538838 COPG2Q9UBF2 871 aa22.79■■□□□ 1.24
TMEM260-202ENST00000538838 RIF1Q5UIP0 2472 aaKnown RBP22.78■■□□□ 1.24
TMEM260-202ENST00000538838 LOC105378220A0A1B0GUY1 285 aaPredicted RBP22.78■■□□□ 1.24
TMEM260-202ENST00000538838 LILRA5A6NI73 299 aa22.78■■□□□ 1.24
TMEM260-202ENST00000538838 KLK8O60259 260 aa22.78■■□□□ 1.24
TMEM260-202ENST00000538838 CPA3P15088 417 aa22.78■■□□□ 1.24
TMEM260-202ENST00000538838 TAC1P20366 129 aa22.78■■□□□ 1.24
TMEM260-202ENST00000538838 SHMT2P34897 504 aa22.78■■□□□ 1.24
TMEM260-202ENST00000538838 AGTRAPQ6RW13 159 aa22.78■■□□□ 1.24
TMEM260-202ENST00000538838 AMIGO1Q86WK6 493 aa22.78■■□□□ 1.24
TMEM260-202ENST00000538838 SYTL1Q8IYJ3 562 aa22.78■■□□□ 1.24
TMEM260-202ENST00000538838 RAB42Q8N4Z0 105 aa22.78■■□□□ 1.24
TMEM260-202ENST00000538838 ESAMQ96AP7 390 aa22.78■■□□□ 1.24
TMEM260-202ENST00000538838 MECRQ9BV79 373 aa22.78■■□□□ 1.24
TMEM260-202ENST00000538838 RAB11FIP5Q9BXF6 653 aa22.78■■□□□ 1.24
TMEM260-202ENST00000538838 LDHAL6BQ9BYZ2 381 aaPredicted RBP22.78■■□□□ 1.24
TMEM260-202ENST00000538838 SRMSQ9H3Y6 488 aa22.78■■□□□ 1.24
TMEM260-202ENST00000538838 NKIRAS1Q9NYS0 192 aa22.78■■□□□ 1.24
TMEM260-202ENST00000538838 FTSJ1Q9UET6 329 aa22.78■■□□□ 1.24
TMEM260-202ENST00000538838 LNPEPQ9UIQ6 1025 aa22.78■■□□□ 1.24
TMEM260-202ENST00000538838 MID2Q9UJV3 735 aa22.78■■□□□ 1.24
TMEM260-202ENST00000538838 ASB1Q9Y576 335 aa22.78■■□□□ 1.24
TMEM260-202ENST00000538838 RP1P56715 2156 aa22.77■■□□□ 1.24
TMEM260-202ENST00000538838 TAPBPO15533 448 aa22.77■■□□□ 1.24
TMEM260-202ENST00000538838 GFRA3O60609 400 aa22.77■■□□□ 1.24
TMEM260-202ENST00000538838 CKMT1AP12532 417 aa22.77■■□□□ 1.24
TMEM260-202ENST00000538838 KCNA4P22459 653 aa22.77■■□□□ 1.24
TMEM260-202ENST00000538838 ATP5F1P24539 256 aaPredicted RBP22.77■■□□□ 1.24
TMEM260-202ENST00000538838 AGTR2P50052 363 aa22.77■■□□□ 1.24
TMEM260-202ENST00000538838 SLC18A1P54219 525 aa22.77■■□□□ 1.24
TMEM260-202ENST00000538838 ALDH18A1P54886 795 aaKnown RBP22.77■■□□□ 1.24
TMEM260-202ENST00000538838 SETDB1Q15047 1291 aa22.77■■□□□ 1.24
TMEM260-202ENST00000538838 CYP2A13Q16696 494 aa22.77■■□□□ 1.24
TMEM260-202ENST00000538838 CDKL4Q5MAI5 379 aa22.77■■□□□ 1.24
TMEM260-202ENST00000538838 PERM1Q5SV97 790 aa22.77■■□□□ 1.24
TMEM260-202ENST00000538838 ANKS6Q68DC2 871 aa22.77■■□□□ 1.24
TMEM260-202ENST00000538838 SULT1C3Q6IMI6 304 aa22.77■■□□□ 1.24
TMEM260-202ENST00000538838 OR2L8Q8NGY9 312 aa22.77■■□□□ 1.24
TMEM260-202ENST00000538838 MDM1Q8TC05 714 aa22.77■■□□□ 1.24
TMEM260-202ENST00000538838 ATL1Q8WXF7 558 aa22.77■■□□□ 1.24
TMEM260-202ENST00000538838 PTBP2Q9UKA9 531 aaKnown RBP22.77■■□□□ 1.24
TMEM260-202ENST00000538838 EME2A4GXA9 379 aaPredicted RBP22.76■■□□□ 1.23
TMEM260-202ENST00000538838 LDOC1O95751 146 aaPredicted RBP22.76■■□□□ 1.23
TMEM260-202ENST00000538838 HNMTP50135 292 aa22.76■■□□□ 1.23
TMEM260-202ENST00000538838 WDR4P57081 412 aaKnown RBP22.76■■□□□ 1.23
TMEM260-202ENST00000538838 NFKB2Q00653 900 aa22.76■■□□□ 1.23
TMEM260-202ENST00000538838 ARHGAP19Q14CB8 494 aa22.76■■□□□ 1.23
TMEM260-202ENST00000538838 EFL1Q7Z2Z2 1120 aaKnown RBP22.76■■□□□ 1.23
TMEM260-202ENST00000538838 TCAIMQ8N3R3 496 aa22.76■■□□□ 1.23
TMEM260-202ENST00000538838 BAHD1Q8TBE0 780 aaPredicted RBP22.76■■□□□ 1.23
TMEM260-202ENST00000538838 PYCR2Q96C36 320 aa22.76■■□□□ 1.23
TMEM260-202ENST00000538838 MED8Q96G25 268 aa22.76■■□□□ 1.23
TMEM260-202ENST00000538838 TMCO1Q9UM00 188 aa22.76■■□□□ 1.23
TMEM260-202ENST00000538838 GVINP1Q7Z2Y8 2422 aa22.76■■□□□ 1.23
TMEM260-202ENST00000538838 ASXL3Q9C0F0 2248 aa22.75■■□□□ 1.23
TMEM260-202ENST00000538838 LRRC14BA6NHZ5 514 aa22.75■■□□□ 1.23
TMEM260-202ENST00000538838 SIX3O95343 332 aaPredicted RBP22.75■■□□□ 1.23
TMEM260-202ENST00000538838 DHRS4L1P0CG22 281 aa22.75■■□□□ 1.23
TMEM260-202ENST00000538838 TYRP1P17643 537 aa22.75■■□□□ 1.23
TMEM260-202ENST00000538838 ALDH4A1P30038 563 aa22.75■■□□□ 1.23
TMEM260-202ENST00000538838 SERPINB4P48594 390 aa22.75■■□□□ 1.23
TMEM260-202ENST00000538838 HSPA7P48741 367 aa22.75■■□□□ 1.23
TMEM260-202ENST00000538838 TBPL1P62380 186 aa22.75■■□□□ 1.23
TMEM260-202ENST00000538838 TSTA3Q13630 321 aaPredicted RBP22.75■■□□□ 1.23
TMEM260-202ENST00000538838 NR1D2Q14995 579 aa22.75■■□□□ 1.23
TMEM260-202ENST00000538838 SUSD1Q6UWL2 747 aa22.75■■□□□ 1.23
TMEM260-202ENST00000538838 C10orf107Q8IVU9 208 aa22.75■■□□□ 1.23
TMEM260-202ENST00000538838 LRRC56Q8IYG6 542 aaPredicted RBP22.75■■□□□ 1.23
TMEM260-202ENST00000538838 Q8N9G6 341 aaPredicted RBP22.75■■□□□ 1.23
TMEM260-202ENST00000538838 OR6C4Q8NGE1 309 aa22.75■■□□□ 1.23
TMEM260-202ENST00000538838 OR10G6Q8NH81 332 aa22.75■■□□□ 1.23
TMEM260-202ENST00000538838 RSC1A1Q92681 617 aa22.75■■□□□ 1.23
TMEM260-202ENST00000538838 PAIP2Q9BPZ3 127 aaKnown RBP22.75■■□□□ 1.23
TMEM260-202ENST00000538838 ABCF3Q9NUQ8 709 aa22.75■■□□□ 1.23
TMEM260-202ENST00000538838 KCNK4Q9NYG8 393 aa22.75■■□□□ 1.23
TMEM260-202ENST00000538838 FAM186AA6NE01 2351 aa22.75■■□□□ 1.23
TMEM260-202ENST00000538838 PCM1Q15154 2024 aa22.75■■□□□ 1.23
TMEM260-202ENST00000538838 SNRNP200O75643 2136 aaKnown RBP22.75■■□□□ 1.23
TMEM260-202ENST00000538838 OR6C74A6NCV1 312 aa22.75■■□□□ 1.23
TMEM260-202ENST00000538838 E7ENX8 843 aa22.75■■□□□ 1.23
TMEM260-202ENST00000538838 BTN3A3O00478 584 aa22.75■■□□□ 1.23
TMEM260-202ENST00000538838 CBFA2T3O75081 653 aa22.75■■□□□ 1.23
TMEM260-202ENST00000538838 IPO13O94829 963 aaKnown RBP22.75■■□□□ 1.23
TMEM260-202ENST00000538838 UBXN7O94888 489 aa22.75■■□□□ 1.23
TMEM260-202ENST00000538838 ALDH3A1P30838 453 aa22.75■■□□□ 1.23
TMEM260-202ENST00000538838 HSD17B2P37059 387 aa22.75■■□□□ 1.23
TMEM260-202ENST00000538838 GDF5P43026 501 aa22.75■■□□□ 1.23
TMEM260-202ENST00000538838 OR1D5P58170 312 aa22.75■■□□□ 1.23
TMEM260-202ENST00000538838 TAP2Q03519 686 aa22.75■■□□□ 1.23
TMEM260-202ENST00000538838 NAE1Q13564 534 aa22.75■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms