RNA–Protein interactions for RNA: ENST00000538253.5

PTPN22-211, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-211ENST00000538253 BMFQ96LC9 184 aa3.49□□□□□ -1.85
PTPN22-211ENST00000538253 CIB1Q99828 191 aa3.49□□□□□ -1.85
PTPN22-211ENST00000538253 TRIM56Q9BRZ2 755 aaKnown RBP3.49□□□□□ -1.85
PTPN22-211ENST00000538253 DPH5Q9H2P9 285 aa3.49□□□□□ -1.85
PTPN22-211ENST00000538253 SRMSQ9H3Y6 488 aa3.49□□□□□ -1.85
PTPN22-211ENST00000538253 COG4Q9H9E3 785 aa3.49□□□□□ -1.85
PTPN22-211ENST00000538253 TREX1Q9NSU2 369 aa3.49□□□□□ -1.85
PTPN22-211ENST00000538253 UBP1Q9NZI7 540 aa3.49□□□□□ -1.85
PTPN22-211ENST00000538253 NUDT4Q9NZJ9 180 aa3.49□□□□□ -1.85
PTPN22-211ENST00000538253 CAMSAP3Q9P1Y5 1249 aaPredicted RBP3.49□□□□□ -1.85
PTPN22-211ENST00000538253 PSMC3IPQ9P2W1 217 aaPredicted RBP3.49□□□□□ -1.85
PTPN22-211ENST00000538253 CIDEBQ9UHD4 219 aa3.49□□□□□ -1.85
PTPN22-211ENST00000538253 DCDC2Q9UHG0 476 aa3.49□□□□□ -1.85
PTPN22-211ENST00000538253 SERTAD3Q9UJW9 196 aa3.49□□□□□ -1.85
PTPN22-211ENST00000538253 DHRS7Q9Y394 339 aa3.49□□□□□ -1.85
PTPN22-211ENST00000538253 TSC22D4Q9Y3Q8 395 aa3.49□□□□□ -1.85
PTPN22-211ENST00000538253 COL4A2P08572 1712 aa3.49□□□□□ -1.85
PTPN22-211ENST00000538253 KIAA1549LQ6ZVL6 1849 aa3.49□□□□□ -1.85
PTPN22-211ENST00000538253 GSAPA4D1B5 854 aa3.49□□□□□ -1.85
PTPN22-211ENST00000538253 TLCD2A6NGC4 264 aa3.49□□□□□ -1.85
PTPN22-211ENST00000538253 K7ESM1 405 aa3.49□□□□□ -1.85
PTPN22-211ENST00000538253 RAD51CO43502 376 aa3.49□□□□□ -1.85
PTPN22-211ENST00000538253 MGRN1O60291 552 aa3.49□□□□□ -1.85
PTPN22-211ENST00000538253 TSPAN9O75954 239 aa3.49□□□□□ -1.85
PTPN22-211ENST00000538253 BMP10O95393 424 aa3.49□□□□□ -1.85
PTPN22-211ENST00000538253 OXSR1O95747 527 aaPredicted RBP3.49□□□□□ -1.85
PTPN22-211ENST00000538253 TPBGLP0DKB5 382 aa3.49□□□□□ -1.85
PTPN22-211ENST00000538253 ERVK-10P10266 1014 aa3.49□□□□□ -1.85
PTPN22-211ENST00000538253 HSD3B2P26439 372 aa3.49□□□□□ -1.85
PTPN22-211ENST00000538253 MAGEA3P43357 314 aa3.49□□□□□ -1.85
PTPN22-211ENST00000538253 KCNJ1P48048 391 aa3.49□□□□□ -1.85
PTPN22-211ENST00000538253 CARSP49589 748 aaKnown RBP3.49□□□□□ -1.85
PTPN22-211ENST00000538253 ARFIP1P53367 373 aa3.49□□□□□ -1.85
PTPN22-211ENST00000538253 HHEXQ03014 270 aa3.49□□□□□ -1.85
PTPN22-211ENST00000538253 RGS1Q08116 209 aa3.49□□□□□ -1.85
PTPN22-211ENST00000538253 DHX9Q08211 1270 aaKnown RBP3.49□□□□□ -1.85
PTPN22-211ENST00000538253 USP10Q14694 798 aaKnown RBP3.49□□□□□ -1.85
PTPN22-211ENST00000538253 C21orf62-AS1Q17RA5 79 aa3.49□□□□□ -1.85
PTPN22-211ENST00000538253 RAB6CQ53S08 254 aa3.49□□□□□ -1.85
PTPN22-211ENST00000538253 METRNLQ641Q3 311 aa3.49□□□□□ -1.85
PTPN22-211ENST00000538253 SIGIRRQ6IA17 410 aa3.49□□□□□ -1.85
PTPN22-211ENST00000538253 FAM180BQ6P0A1 224 aa3.49□□□□□ -1.85
PTPN22-211ENST00000538253 DUS1LQ6P1R4 473 aaKnown RBP3.49□□□□□ -1.85
PTPN22-211ENST00000538253 TMEM71Q6P5X7 295 aa3.49□□□□□ -1.85
PTPN22-211ENST00000538253 PRSS42Q7Z5A4 293 aa3.49□□□□□ -1.85
PTPN22-211ENST00000538253 ADGRG6Q86SQ4 1221 aa3.49□□□□□ -1.85
PTPN22-211ENST00000538253 PIP4P1Q86T03 277 aa3.49□□□□□ -1.85
PTPN22-211ENST00000538253 CADM3Q8N126 398 aa3.49□□□□□ -1.85
PTPN22-211ENST00000538253 EID2Q8N6I1 236 aa3.49□□□□□ -1.85
PTPN22-211ENST00000538253 FBXO36Q8NEA4 188 aa3.49□□□□□ -1.85
PTPN22-211ENST00000538253 OR4D9Q8NGE8 314 aa3.49□□□□□ -1.85
PTPN22-211ENST00000538253 C1orf216Q8TAB5 229 aa3.49□□□□□ -1.85
PTPN22-211ENST00000538253 WDR60Q8WVS4 1066 aa3.49□□□□□ -1.85
PTPN22-211ENST00000538253 CCT6BQ92526 530 aa3.49□□□□□ -1.85
PTPN22-211ENST00000538253 TFGQ92734 400 aaPredicted RBP3.49□□□□□ -1.85
PTPN22-211ENST00000538253 ZUFSPQ96AP4 578 aa3.49□□□□□ -1.85
PTPN22-211ENST00000538253 NRBF2Q96F24 287 aa3.49□□□□□ -1.85
PTPN22-211ENST00000538253 KLF6Q99612 283 aaPredicted RBP3.49□□□□□ -1.85
PTPN22-211ENST00000538253 AARSD1Q9BTE6 412 aaKnown RBP3.49□□□□□ -1.85
PTPN22-211ENST00000538253 DHRS4Q9BTZ2 278 aa3.49□□□□□ -1.85
PTPN22-211ENST00000538253 RAB6CQ9H0N0 254 aa3.49□□□□□ -1.85
PTPN22-211ENST00000538253 LRRN3Q9H3W5 708 aa3.49□□□□□ -1.85
PTPN22-211ENST00000538253 ACSS3Q9H6R3 686 aa3.49□□□□□ -1.85
PTPN22-211ENST00000538253 RDH14Q9HBH5 336 aa3.49□□□□□ -1.85
PTPN22-211ENST00000538253 ARFGAP3Q9NP61 516 aa3.49□□□□□ -1.85
PTPN22-211ENST00000538253 ANGPTL2Q9UKU9 493 aa3.49□□□□□ -1.85
PTPN22-211ENST00000538253 HCN2Q9UL51 889 aa3.49□□□□□ -1.85
PTPN22-211ENST00000538253 INVSQ9Y283 1065 aa3.49□□□□□ -1.85
PTPN22-211ENST00000538253 ASF1AQ9Y294 204 aa3.49□□□□□ -1.85
PTPN22-211ENST00000538253 FNDC3AQ9Y2H6 1198 aaKnown RBP3.49□□□□□ -1.85
PTPN22-211ENST00000538253 CRYL1Q9Y2S2 319 aa3.49□□□□□ -1.85
PTPN22-211ENST00000538253 ACOT9Q9Y305 439 aa3.49□□□□□ -1.85
PTPN22-211ENST00000538253 VWA7Q9Y334 891 aa3.49□□□□□ -1.85
PTPN22-211ENST00000538253 L3MBTL1Q9Y468 752 aa3.49□□□□□ -1.85
PTPN22-211ENST00000538253 DOCK6Q96HP0 2047 aa3.49□□□□□ -1.85
PTPN22-211ENST00000538253 TARM1B6A8C7 271 aa3.48□□□□□ -1.85
PTPN22-211ENST00000538253 NVLO15381 856 aaKnown RBP3.48□□□□□ -1.85
PTPN22-211ENST00000538253 DYRK3O43781 588 aa3.48□□□□□ -1.85
PTPN22-211ENST00000538253 SRPX2O60687 465 aaPredicted RBP3.48□□□□□ -1.85
PTPN22-211ENST00000538253 GLRA3O75311 464 aa3.48□□□□□ -1.85
PTPN22-211ENST00000538253 MT-CO3P00414 261 aa3.48□□□□□ -1.85
PTPN22-211ENST00000538253 CEACAM5P06731 702 aa3.48□□□□□ -1.85
PTPN22-211ENST00000538253 KLK3P07288 261 aaPredicted RBP3.48□□□□□ -1.85
PTPN22-211ENST00000538253 PDHA1P08559 390 aa3.48□□□□□ -1.85
PTPN22-211ENST00000538253 CCNYL3P0C7X3 344 aa3.48□□□□□ -1.85
PTPN22-211ENST00000538253 ACP5P13686 325 aa3.48□□□□□ -1.85
PTPN22-211ENST00000538253 ZNF3P17036 446 aa3.48□□□□□ -1.85
PTPN22-211ENST00000538253 ELK3P41970 407 aa3.48□□□□□ -1.85
PTPN22-211ENST00000538253 RAB28P51157 221 aa3.48□□□□□ -1.85
PTPN22-211ENST00000538253 ERVPABLB-1P60509 514 aa3.48□□□□□ -1.85
PTPN22-211ENST00000538253 POLR2GP62487 172 aaKnown RBP eCLIP3.48□□□□□ -1.85
PTPN22-211ENST00000538253 PSPHP78330 225 aa3.48□□□□□ -1.85
PTPN22-211ENST00000538253 IL11RAQ14626 422 aa3.48□□□□□ -1.85
PTPN22-211ENST00000538253 TRIP13Q15645 432 aaPredicted RBP3.48□□□□□ -1.85
PTPN22-211ENST00000538253 KYNUQ16719 465 aa3.48□□□□□ -1.85
PTPN22-211ENST00000538253 ATP13A5Q4VNC0 1218 aa3.48□□□□□ -1.85
PTPN22-211ENST00000538253 FNBP1LQ5T0N5 605 aa3.48□□□□□ -1.85
PTPN22-211ENST00000538253 C6orf163Q5TEZ5 329 aa3.48□□□□□ -1.85
PTPN22-211ENST00000538253 GARNL3Q5VVW2 1013 aa3.48□□□□□ -1.85
PTPN22-211ENST00000538253 SULT1C3Q6IMI6 304 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms