RNA–Protein interactions for RNA: ENST00000538120.5

CLIP1-210, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 2,472 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-210ENST00000538120 SHHQ15465 462 aa10.48□□□□□ -0.73
CLIP1-210ENST00000538120 ADRM1Q16186 407 aa10.48□□□□□ -0.73
CLIP1-210ENST00000538120 ANKDD1AQ495B1 522 aa10.48□□□□□ -0.73
CLIP1-210ENST00000538120 C6orf136Q5SQH8 315 aa10.48□□□□□ -0.73
CLIP1-210ENST00000538120 ZBTB49Q6ZSB9 765 aa10.48□□□□□ -0.73
CLIP1-210ENST00000538120 TRAM1L1Q8N609 369 aa10.48□□□□□ -0.73
CLIP1-210ENST00000538120 METTL6Q8TCB7 284 aa10.48□□□□□ -0.73
CLIP1-210ENST00000538120 FGF13Q92913 245 aa10.48□□□□□ -0.73
CLIP1-210ENST00000538120 SMARCD2Q92925 531 aa10.48□□□□□ -0.73
CLIP1-210ENST00000538120 EGFL8Q99944 293 aa10.48□□□□□ -0.73
CLIP1-210ENST00000538120 FAM83CQ9BQN1 747 aa10.48□□□□□ -0.73
CLIP1-210ENST00000538120 GPATCH1Q9BRR8 931 aaKnown RBP10.48□□□□□ -0.73
CLIP1-210ENST00000538120 TMEM181Q9P2C4 612 aa10.48□□□□□ -0.73
CLIP1-210ENST00000538120 NFKBIL1Q9UBC1 381 aaPredicted RBP10.48□□□□□ -0.73
CLIP1-210ENST00000538120 CDC14AQ9UNH5 594 aa10.48□□□□□ -0.73
CLIP1-210ENST00000538120 PDE10AQ9Y233 779 aa10.48□□□□□ -0.73
CLIP1-210ENST00000538120 ITM2BQ9Y287 266 aa10.48□□□□□ -0.73
CLIP1-210ENST00000538120 CCL27Q9Y4X3 112 aa10.48□□□□□ -0.73
CLIP1-210ENST00000538120 EIF3FO00303 357 aaPredicted RBP10.48□□□□□ -0.73
CLIP1-210ENST00000538120 GIPC1O14908 333 aa10.48□□□□□ -0.73
CLIP1-210ENST00000538120 NUAK1O60285 661 aa10.48□□□□□ -0.73
CLIP1-210ENST00000538120 SEC24DO94855 1032 aaPredicted RBP10.48□□□□□ -0.73
CLIP1-210ENST00000538120 OTCP00480 354 aa10.48□□□□□ -0.73
CLIP1-210ENST00000538120 HNRNPCP07910 306 aaKnown RBP eCLIP10.48□□□□□ -0.73
CLIP1-210ENST00000538120 EPORP19235 508 aa10.48□□□□□ -0.73
CLIP1-210ENST00000538120 FCARP24071 287 aa10.48□□□□□ -0.73
CLIP1-210ENST00000538120 SLC7A1P30825 629 aa10.48□□□□□ -0.73
CLIP1-210ENST00000538120 GRIA3P42263 894 aa10.48□□□□□ -0.73
CLIP1-210ENST00000538120 SLC7A2P52569 658 aa10.48□□□□□ -0.73
CLIP1-210ENST00000538120 PRKCQQ04759 706 aa10.48□□□□□ -0.73
CLIP1-210ENST00000538120 GRIN2CQ14957 1233 aa10.48□□□□□ -0.73
CLIP1-210ENST00000538120 LIPIQ6XZB0 460 aa10.48□□□□□ -0.73
CLIP1-210ENST00000538120 MILR1Q7Z6M3 343 aa10.48□□□□□ -0.73
CLIP1-210ENST00000538120 CLVS1Q8IUQ0 354 aaPredicted RBP10.48□□□□□ -0.73
CLIP1-210ENST00000538120 RASGRP3Q8IV61 690 aa10.48□□□□□ -0.73
CLIP1-210ENST00000538120 PRR7Q8TB68 274 aa10.48□□□□□ -0.73
CLIP1-210ENST00000538120 ASB11Q8WXH4 323 aa10.48□□□□□ -0.73
CLIP1-210ENST00000538120 CENPOQ9BU64 300 aa10.48□□□□□ -0.73
CLIP1-210ENST00000538120 TRIM8Q9BZR9 551 aa10.48□□□□□ -0.73
CLIP1-210ENST00000538120 IL1RL2Q9HB29 575 aa10.48□□□□□ -0.73
CLIP1-210ENST00000538120 HPS4Q9NQG7 708 aa10.48□□□□□ -0.73
CLIP1-210ENST00000538120 ENAMQ9NRM1 1142 aa10.48□□□□□ -0.73
CLIP1-210ENST00000538120 PNPLA3Q9NST1 481 aa10.48□□□□□ -0.73
CLIP1-210ENST00000538120 WWOXQ9NZC7 414 aa10.48□□□□□ -0.73
CLIP1-210ENST00000538120 THEGQ9P2T0 379 aa10.48□□□□□ -0.73
CLIP1-210ENST00000538120 CROTQ9UKG9 612 aa10.48□□□□□ -0.73
CLIP1-210ENST00000538120 SLC8A2Q9UPR5 921 aa10.48□□□□□ -0.73
CLIP1-210ENST00000538120 NUP210Q8TEM1 1887 aaPredicted RBP10.48□□□□□ -0.73
CLIP1-210ENST00000538120 ASPDHA6ND91 283 aa10.47□□□□□ -0.73
CLIP1-210ENST00000538120 ANTXRLA6NF34 631 aa10.47□□□□□ -0.73
CLIP1-210ENST00000538120 BBIP1A8MTZ0 92 aa10.47□□□□□ -0.73
CLIP1-210ENST00000538120 HEPACAM2A8MVW5 462 aa10.47□□□□□ -0.73
CLIP1-210ENST00000538120 K7EPI3 171 aa10.47□□□□□ -0.73
CLIP1-210ENST00000538120 DLGAP1O14490 977 aa10.47□□□□□ -0.73
CLIP1-210ENST00000538120 AKAP10O43572 662 aa10.47□□□□□ -0.73
CLIP1-210ENST00000538120 TPST1O60507 370 aa10.47□□□□□ -0.73
CLIP1-210ENST00000538120 TFPTP0C1Z6 253 aa10.47□□□□□ -0.73
CLIP1-210ENST00000538120 HLA-EP13747 358 aa10.47□□□□□ -0.73
CLIP1-210ENST00000538120 ATP6V1B2P21281 511 aa10.47□□□□□ -0.73
CLIP1-210ENST00000538120 FSHRP23945 695 aa10.47□□□□□ -0.73
CLIP1-210ENST00000538120 IL12AP29459 219 aa10.47□□□□□ -0.73
CLIP1-210ENST00000538120 AKT1P31749 480 aa10.47□□□□□ -0.73
CLIP1-210ENST00000538120 CLCN2P51788 898 aa10.47□□□□□ -0.73
CLIP1-210ENST00000538120 UFM1P61960 85 aa10.47□□□□□ -0.73
CLIP1-210ENST00000538120 ERVK-8P63133 956 aa10.47□□□□□ -0.73
CLIP1-210ENST00000538120 PLOD1Q02809 727 aaPredicted RBP10.47□□□□□ -0.73
CLIP1-210ENST00000538120 HSPA14Q0VDF9 509 aa10.47□□□□□ -0.73
CLIP1-210ENST00000538120 GRIK2Q13002 908 aa10.47□□□□□ -0.73
CLIP1-210ENST00000538120 ABRAXAS2Q15018 415 aa10.47□□□□□ -0.73
CLIP1-210ENST00000538120 C9orf64Q5T6V5 341 aa10.47□□□□□ -0.73
CLIP1-210ENST00000538120 ALKBH2Q6NS38 261 aa10.47□□□□□ -0.73
CLIP1-210ENST00000538120 IL27RAQ6UWB1 636 aa10.47□□□□□ -0.73
CLIP1-210ENST00000538120 DDHD1Q8NEL9 900 aa10.47□□□□□ -0.73
CLIP1-210ENST00000538120 FNDC8Q8TC99 324 aa10.47□□□□□ -0.73
CLIP1-210ENST00000538120 HBEGFQ99075 208 aa10.47□□□□□ -0.73
CLIP1-210ENST00000538120 C1orf50Q9BV19 199 aa10.47□□□□□ -0.73
CLIP1-210ENST00000538120 SLC12A9Q9BXP2 914 aa10.47□□□□□ -0.73
CLIP1-210ENST00000538120 ANKRD60Q9BZ19 345 aa10.47□□□□□ -0.73
CLIP1-210ENST00000538120 SFXN1Q9H9B4 322 aa10.47□□□□□ -0.73
CLIP1-210ENST00000538120 SPAG4Q9NPE6 437 aa10.47□□□□□ -0.73
CLIP1-210ENST00000538120 OPTCQ9UBM4 332 aa10.47□□□□□ -0.73
CLIP1-210ENST00000538120 ATG2AQ2TAZ0 1938 aa10.47□□□□□ -0.73
CLIP1-210ENST00000538120 EPOPA6NHQ4 379 aa10.47□□□□□ -0.73
CLIP1-210ENST00000538120 FXYD1O00168 92 aa10.47□□□□□ -0.73
CLIP1-210ENST00000538120 LSM1O15116 133 aaKnown RBP10.47□□□□□ -0.73
CLIP1-210ENST00000538120 NFATC1O95644 943 aa10.47□□□□□ -0.73
CLIP1-210ENST00000538120 MPC1LP0DKB6 136 aa10.47□□□□□ -0.73
CLIP1-210ENST00000538120 GGT5P36269 586 aa10.47□□□□□ -0.73
CLIP1-210ENST00000538120 RPIAP49247 311 aa10.47□□□□□ -0.73
CLIP1-210ENST00000538120 PDCD4Q53EL6 469 aaKnown RBP10.47□□□□□ -0.73
CLIP1-210ENST00000538120 CDKL4Q5MAI5 379 aa10.47□□□□□ -0.73
CLIP1-210ENST00000538120 PLEKHS1Q5SXH7 462 aa10.47□□□□□ -0.73
CLIP1-210ENST00000538120 TMEM164Q5U3C3 297 aa10.47□□□□□ -0.73
CLIP1-210ENST00000538120 ZCCHC8Q6NZY4 707 aaKnown RBP10.47□□□□□ -0.73
CLIP1-210ENST00000538120 METTL2BQ6P1Q9 378 aaKnown RBP10.47□□□□□ -0.73
CLIP1-210ENST00000538120 UBE2R2Q712K3 238 aaPredicted RBP10.47□□□□□ -0.73
CLIP1-210ENST00000538120 EPHX4Q8IUS5 362 aa10.47□□□□□ -0.73
CLIP1-210ENST00000538120 BEND7Q8N7W2 519 aaPredicted RBP10.47□□□□□ -0.73
CLIP1-210ENST00000538120 TFAP2CQ92754 450 aa10.47□□□□□ -0.73
CLIP1-210ENST00000538120 ARRDC3Q96B67 414 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms