RNA–Protein interactions for RNA: ENST00000537435.2

USP44-203, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-203ENST00000537435 SP3Q02447 781 aa13.97□□□□□ -0.17
USP44-203ENST00000537435 MOGQ16653 247 aa13.97□□□□□ -0.17
USP44-203ENST00000537435 DET1Q7L5Y6 550 aa13.97□□□□□ -0.17
USP44-203ENST00000537435 RNF168Q8IYW5 571 aaPredicted RBP13.97□□□□□ -0.17
USP44-203ENST00000537435 DNAJB8Q8NHS0 232 aa13.97□□□□□ -0.17
USP44-203ENST00000537435 C19orf43Q9BQ61 176 aa13.97□□□□□ -0.17
USP44-203ENST00000537435 ATP13A3Q9H7F0 1226 aa13.97□□□□□ -0.17
USP44-203ENST00000537435 GPN2Q9H9Y4 310 aaPredicted RBP13.97□□□□□ -0.17
USP44-203ENST00000537435 SRRDQ9UH36 339 aa13.97□□□□□ -0.17
USP44-203ENST00000537435 PSME2Q9UL46 239 aa13.97□□□□□ -0.17
USP44-203ENST00000537435 MAN2B2Q9Y2E5 1009 aa13.97□□□□□ -0.17
USP44-203ENST00000537435 CPQQ9Y646 472 aa13.97□□□□□ -0.17
USP44-203ENST00000537435 A0A096LPI6 279 aa13.97□□□□□ -0.17
USP44-203ENST00000537435 PFKLP17858 780 aa13.97□□□□□ -0.17
USP44-203ENST00000537435 TACR1P25103 407 aa13.97□□□□□ -0.17
USP44-203ENST00000537435 CDKN2CP42773 168 aa13.97□□□□□ -0.17
USP44-203ENST00000537435 NSG1P42857 185 aa13.97□□□□□ -0.17
USP44-203ENST00000537435 BMXP51813 675 aa13.97□□□□□ -0.17
USP44-203ENST00000537435 ISL1P61371 349 aa13.97□□□□□ -0.17
USP44-203ENST00000537435 TXNDC8Q6A555 127 aa13.97□□□□□ -0.17
USP44-203ENST00000537435 CES5AQ6NT32 575 aa13.97□□□□□ -0.17
USP44-203ENST00000537435 Q6ZNB5 142 aa13.97□□□□□ -0.17
USP44-203ENST00000537435 CBARPQ8N350 705 aaPredicted RBP13.97□□□□□ -0.17
USP44-203ENST00000537435 ARL10Q8N8L6 244 aa13.97□□□□□ -0.17
USP44-203ENST00000537435 NAT16Q8N8M0 369 aa13.97□□□□□ -0.17
USP44-203ENST00000537435 PPP1R14BQ96C90 147 aa13.97□□□□□ -0.17
USP44-203ENST00000537435 PYURFQ96I23 114 aa13.97□□□□□ -0.17
USP44-203ENST00000537435 IGSF21Q96ID5 467 aa13.97□□□□□ -0.17
USP44-203ENST00000537435 ITCHQ96J02 903 aa13.97□□□□□ -0.17
USP44-203ENST00000537435 PLEKHA8Q96JA3 519 aa13.97□□□□□ -0.17
USP44-203ENST00000537435 DGCR6LQ9BY27 220 aa13.97□□□□□ -0.17
USP44-203ENST00000537435 RMND5AQ9H871 391 aa13.97□□□□□ -0.17
USP44-203ENST00000537435 EXD2Q9NVH0 621 aa13.97□□□□□ -0.17
USP44-203ENST00000537435 TBCCD1Q9NVR7 557 aa13.97□□□□□ -0.17
USP44-203ENST00000537435 WARS2Q9UGM6 360 aaKnown RBP13.97□□□□□ -0.17
USP44-203ENST00000537435 ABT1Q9ULW3 272 aaKnown RBP13.97□□□□□ -0.17
USP44-203ENST00000537435 CLEC4EQ9ULY5 219 aa13.97□□□□□ -0.17
USP44-203ENST00000537435 SLC1A7O00341 560 aa13.96□□□□□ -0.17
USP44-203ENST00000537435 PER2O15055 1255 aa13.96□□□□□ -0.17
USP44-203ENST00000537435 RECQL5O94762 991 aaPredicted RBP13.96□□□□□ -0.17
USP44-203ENST00000537435 HNRNPCP07910 306 aaKnown RBP eCLIP13.96□□□□□ -0.17
USP44-203ENST00000537435 CCR7P32248 378 aa13.96□□□□□ -0.17
USP44-203ENST00000537435 MAPK8P45983 427 aa13.96□□□□□ -0.17
USP44-203ENST00000537435 PPP3CCP48454 512 aa13.96□□□□□ -0.17
USP44-203ENST00000537435 SPIDRQ14159 915 aa13.96□□□□□ -0.17
USP44-203ENST00000537435 DPY19L1Q2PZI1 675 aa13.96□□□□□ -0.17
USP44-203ENST00000537435 PGS1Q32NB8 556 aa13.96□□□□□ -0.17
USP44-203ENST00000537435 ZNF691Q5VV52 312 aa13.96□□□□□ -0.17
USP44-203ENST00000537435 CRTC1Q6UUV9 634 aa13.96□□□□□ -0.17
USP44-203ENST00000537435 UBE2R2Q712K3 238 aaPredicted RBP13.96□□□□□ -0.17
USP44-203ENST00000537435 ZNF554Q86TJ5 538 aa13.96□□□□□ -0.17
USP44-203ENST00000537435 DCP2Q8IU60 420 aaKnown RBP13.96□□□□□ -0.17
USP44-203ENST00000537435 ELOVL6Q9H5J4 265 aa13.96□□□□□ -0.17
USP44-203ENST00000537435 TMEFF2Q9UIK5 374 aaPredicted RBP13.96□□□□□ -0.17
USP44-203ENST00000537435 PPT2Q9UMR5 302 aa13.96□□□□□ -0.17
USP44-203ENST00000537435 AGAP14A8MT82 685 aa13.96□□□□□ -0.18
USP44-203ENST00000537435 PRRG1O14668 218 aa13.96□□□□□ -0.18
USP44-203ENST00000537435 ZNF821O75541 412 aaPredicted RBP13.96□□□□□ -0.18
USP44-203ENST00000537435 ARHGEF15O94989 841 aa13.96□□□□□ -0.18
USP44-203ENST00000537435 ZBTB11O95625 1053 aaPredicted RBP13.96□□□□□ -0.18
USP44-203ENST00000537435 IGSF6O95976 241 aa13.96□□□□□ -0.18
USP44-203ENST00000537435 CBSLP0DN79 551 aa13.96□□□□□ -0.18
USP44-203ENST00000537435 PRPS2P11908 318 aa13.96□□□□□ -0.18
USP44-203ENST00000537435 PTPN6P29350 595 aa13.96□□□□□ -0.18
USP44-203ENST00000537435 CBSP35520 551 aa13.96□□□□□ -0.18
USP44-203ENST00000537435 CSNK1DP48730 415 aa13.96□□□□□ -0.18
USP44-203ENST00000537435 TOP3AQ13472 1001 aaPredicted RBP13.96□□□□□ -0.18
USP44-203ENST00000537435 ZXDCQ2QGD7 858 aaPredicted RBP13.96□□□□□ -0.18
USP44-203ENST00000537435 TPGS2Q68CL5 300 aa13.96□□□□□ -0.18
USP44-203ENST00000537435 HIPK1Q86Z02 1210 aa13.96□□□□□ -0.18
USP44-203ENST00000537435 BEND7Q8N7W2 519 aaPredicted RBP13.96□□□□□ -0.18
USP44-203ENST00000537435 DDHD1Q8NEL9 900 aa13.96□□□□□ -0.18
USP44-203ENST00000537435 SCLYQ96I15 445 aa13.96□□□□□ -0.18
USP44-203ENST00000537435 ZNF334Q9HCZ1 680 aaPredicted RBP13.96□□□□□ -0.18
USP44-203ENST00000537435 ZDHHC3Q9NYG2 299 aa13.96□□□□□ -0.18
USP44-203ENST00000537435 GPRC5BQ9NZH0 403 aa13.96□□□□□ -0.18
USP44-203ENST00000537435 SNX5Q9Y5X3 404 aa13.96□□□□□ -0.18
USP44-203ENST00000537435 PTGES3LE9PB15 166 aa13.95□□□□□ -0.18
USP44-203ENST00000537435 WNT9AO14904 365 aa13.95□□□□□ -0.18
USP44-203ENST00000537435 LRATO95237 230 aa13.95□□□□□ -0.18
USP44-203ENST00000537435 ALDH1A1P00352 501 aa13.95□□□□□ -0.18
USP44-203ENST00000537435 HOXB9P17482 250 aaPredicted RBP13.95□□□□□ -0.18
USP44-203ENST00000537435 IL1RNP18510 177 aa13.95□□□□□ -0.18
USP44-203ENST00000537435 SDC1P18827 310 aa13.95□□□□□ -0.18
USP44-203ENST00000537435 SERPINA4P29622 427 aa13.95□□□□□ -0.18
USP44-203ENST00000537435 B4GALNT1Q00973 533 aa13.95□□□□□ -0.18
USP44-203ENST00000537435 ABHD18Q0P651 414 aa13.95□□□□□ -0.18
USP44-203ENST00000537435 LMAN2Q12907 356 aa13.95□□□□□ -0.18
USP44-203ENST00000537435 DGKKQ5KSL6 1271 aa13.95□□□□□ -0.18
USP44-203ENST00000537435 LRRC66Q68CR7 880 aa13.95□□□□□ -0.18
USP44-203ENST00000537435 C16orf87Q6PH81 154 aa13.95□□□□□ -0.18
USP44-203ENST00000537435 CHPFQ8IZ52 775 aa13.95□□□□□ -0.18
USP44-203ENST00000537435 SLC22A15Q8IZD6 547 aa13.95□□□□□ -0.18
USP44-203ENST00000537435 SKA2Q8WVK7 121 aaPredicted RBP13.95□□□□□ -0.18
USP44-203ENST00000537435 MUL1Q969V5 352 aa13.95□□□□□ -0.18
USP44-203ENST00000537435 FKBP10Q96AY3 582 aa13.95□□□□□ -0.18
USP44-203ENST00000537435 ASIC4Q96FT7 647 aa13.95□□□□□ -0.18
USP44-203ENST00000537435 APIPQ96GX9 242 aa13.95□□□□□ -0.18
USP44-203ENST00000537435 REXO5Q96IC2 774 aaKnown RBP13.95□□□□□ -0.18
USP44-203ENST00000537435 EGLN2Q96KS0 407 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 221 ms