RNA–Protein interactions for RNA: ENST00000537047.5

CCDC7-208, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-208ENST00000537047 RUSC2Q8N2Y8 1516 aa3.95□□□□□ -1.78
CCDC7-208ENST00000537047 HCFC1P51610 2035 aa3.94□□□□□ -1.78
CCDC7-208ENST00000537047 NPHP1O15259 732 aa3.94□□□□□ -1.78
CCDC7-208ENST00000537047 OR10H2O60403 315 aa3.94□□□□□ -1.78
CCDC7-208ENST00000537047 RNASEH1O60930 286 aaKnown RBP3.94□□□□□ -1.78
CCDC7-208ENST00000537047 TMEM63AO94886 807 aa3.94□□□□□ -1.78
CCDC7-208ENST00000537047 PSMA4P25789 261 aaKnown RBP3.94□□□□□ -1.78
CCDC7-208ENST00000537047 CDH8P55286 799 aa3.94□□□□□ -1.78
CCDC7-208ENST00000537047 GUCY2DQ02846 1103 aa3.94□□□□□ -1.78
CCDC7-208ENST00000537047 ZNF415Q09FC8 603 aa3.94□□□□□ -1.78
CCDC7-208ENST00000537047 GORABQ5T7V8 394 aa3.94□□□□□ -1.78
CCDC7-208ENST00000537047 CES4AQ5XG92 561 aa3.94□□□□□ -1.78
CCDC7-208ENST00000537047 CHST9Q7L1S5 443 aa3.94□□□□□ -1.78
CCDC7-208ENST00000537047 PCYOX1LQ8NBM8 494 aa3.94□□□□□ -1.78
CCDC7-208ENST00000537047 TDRD7Q8NHU6 1098 aaKnown RBP3.94□□□□□ -1.78
CCDC7-208ENST00000537047 LMF2Q9BU23 707 aaKnown RBP3.94□□□□□ -1.78
CCDC7-208ENST00000537047 ITPAQ9BY32 194 aa3.94□□□□□ -1.78
CCDC7-208ENST00000537047 MED20Q9H944 212 aa3.94□□□□□ -1.78
CCDC7-208ENST00000537047 DIAPH3Q9NSV4 1193 aa3.94□□□□□ -1.78
CCDC7-208ENST00000537047 C9orf78Q9NZ63 289 aaPredicted RBP3.94□□□□□ -1.78
CCDC7-208ENST00000537047 SHISA7A6NL88 538 aa3.93□□□□□ -1.78
CCDC7-208ENST00000537047 A8MXK9 166 aa3.93□□□□□ -1.78
CCDC7-208ENST00000537047 MYO1GB0I1T2 1018 aa3.93□□□□□ -1.78
CCDC7-208ENST00000537047 LRCH4O75427 683 aa3.93□□□□□ -1.78
CCDC7-208ENST00000537047 DDX58O95786 925 aaKnown RBP3.93□□□□□ -1.78
CCDC7-208ENST00000537047 RB1P06400 928 aa3.93□□□□□ -1.78
CCDC7-208ENST00000537047 HOXD4P09016 255 aaPredicted RBP3.93□□□□□ -1.78
CCDC7-208ENST00000537047 HSPA8P11142 646 aaKnown RBP3.93□□□□□ -1.78
CCDC7-208ENST00000537047 SLC2A2P11168 524 aaPredicted RBP3.93□□□□□ -1.78
CCDC7-208ENST00000537047 ETV5P41161 510 aa3.93□□□□□ -1.78
CCDC7-208ENST00000537047 PRAMEP78395 509 aa3.93□□□□□ -1.78
CCDC7-208ENST00000537047 TMEM95Q3KNT9 176 aa3.93□□□□□ -1.78
CCDC7-208ENST00000537047 GDPGP1Q6ZNW5 385 aa3.93□□□□□ -1.78
CCDC7-208ENST00000537047 TMPRSS11FQ6ZWK6 438 aa3.93□□□□□ -1.78
CCDC7-208ENST00000537047 AFAP1Q8N556 730 aa3.93□□□□□ -1.78
CCDC7-208ENST00000537047 APOBEC4Q8WW27 367 aaKnown RBP3.93□□□□□ -1.78
CCDC7-208ENST00000537047 ATXN7L3BQ96GX2 97 aa3.93□□□□□ -1.78
CCDC7-208ENST00000537047 NDE1Q9NXR1 346 aa3.93□□□□□ -1.78
CCDC7-208ENST00000537047 HACL1Q9UJ83 578 aa3.93□□□□□ -1.78
CCDC7-208ENST00000537047 PCDH11YQ9BZA8 1340 aa3.93□□□□□ -1.78
CCDC7-208ENST00000537047 ENO4A6NNW6 628 aa3.92□□□□□ -1.78
CCDC7-208ENST00000537047 SHISA9B4DS77 424 aa3.92□□□□□ -1.78
CCDC7-208ENST00000537047 GLRA3O75311 464 aa3.92□□□□□ -1.78
CCDC7-208ENST00000537047 CDK2AP2O75956 126 aa3.92□□□□□ -1.78
CCDC7-208ENST00000537047 ZWINTO95229 277 aa3.92□□□□□ -1.78
CCDC7-208ENST00000537047 VTNP04004 478 aa3.92□□□□□ -1.78
CCDC7-208ENST00000537047 THEGLP0DJG4 465 aa3.92□□□□□ -1.78
CCDC7-208ENST00000537047 CDH3P22223 829 aa3.92□□□□□ -1.78
CCDC7-208ENST00000537047 JAK1P23458 1154 aa3.92□□□□□ -1.78
CCDC7-208ENST00000537047 MAPK4P31152 587 aa3.92□□□□□ -1.78
CCDC7-208ENST00000537047 CLCN4P51793 760 aa3.92□□□□□ -1.78
CCDC7-208ENST00000537047 XGP55808 180 aa3.92□□□□□ -1.78
CCDC7-208ENST00000537047 TMF1P82094 1093 aa3.92□□□□□ -1.78
CCDC7-208ENST00000537047 G3BP1Q13283 466 aaKnown RBP eCLIP3.92□□□□□ -1.78
CCDC7-208ENST00000537047 MCEMP1Q8IX19 187 aa3.92□□□□□ -1.78
CCDC7-208ENST00000537047 SMC5Q8IY18 1101 aa3.92□□□□□ -1.78
CCDC7-208ENST00000537047 OR13C3Q8NGS6 347 aa3.92□□□□□ -1.78
CCDC7-208ENST00000537047 MOSPD2Q8NHP6 518 aa3.92□□□□□ -1.78
CCDC7-208ENST00000537047 TYMSOSQ8TAI1 123 aa3.92□□□□□ -1.78
CCDC7-208ENST00000537047 CNRIP1Q96F85 164 aaPredicted RBP3.92□□□□□ -1.78
CCDC7-208ENST00000537047 RAD9AQ99638 391 aa3.92□□□□□ -1.78
CCDC7-208ENST00000537047 TBC1D17Q9HA65 648 aa3.92□□□□□ -1.78
CCDC7-208ENST00000537047 PPANQ9NQ55 473 aaKnown RBP3.92□□□□□ -1.78
CCDC7-208ENST00000537047 CTSZQ9UBR2 303 aa3.92□□□□□ -1.78
CCDC7-208ENST00000537047 LNP1A1A4G5 178 aa3.91□□□□□ -1.78
CCDC7-208ENST00000537047 TRUB2O95900 331 aaKnown RBP3.91□□□□□ -1.78
CCDC7-208ENST00000537047 TBX18O95935 607 aa3.91□□□□□ -1.78
CCDC7-208ENST00000537047 LAMP2P13473 410 aa3.91□□□□□ -1.78
CCDC7-208ENST00000537047 PTPN3P26045 913 aa3.91□□□□□ -1.78
CCDC7-208ENST00000537047 MTHFSDQ2M296 383 aaKnown RBP3.91□□□□□ -1.78
CCDC7-208ENST00000537047 SNX30Q5VWJ9 437 aa3.91□□□□□ -1.78
CCDC7-208ENST00000537047 FRRS1Q6ZNA5 592 aa3.91□□□□□ -1.78
CCDC7-208ENST00000537047 MARCH9Q86YJ5 346 aa3.91□□□□□ -1.78
CCDC7-208ENST00000537047 SERINC1Q9NRX5 453 aa3.91□□□□□ -1.78
CCDC7-208ENST00000537047 FAM207AQ9NSI2 230 aaPredicted RBP3.91□□□□□ -1.78
CCDC7-208ENST00000537047 ZNF107Q9UII5 783 aaPredicted RBP3.91□□□□□ -1.78
CCDC7-208ENST00000537047 A0A087WUV0 522 aaPredicted RBP3.9□□□□□ -1.79
CCDC7-208ENST00000537047 EPHB6O15197 1021 aa3.9□□□□□ -1.79
CCDC7-208ENST00000537047 MITFO75030 526 aaPredicted RBP3.9□□□□□ -1.79
CCDC7-208ENST00000537047 CDK3Q00526 305 aa3.9□□□□□ -1.79
CCDC7-208ENST00000537047 EIPR1Q53HC9 387 aa3.9□□□□□ -1.79
CCDC7-208ENST00000537047 TMEM154Q6P9G4 183 aa3.9□□□□□ -1.79
CCDC7-208ENST00000537047 CEACAM19Q7Z692 300 aa3.9□□□□□ -1.79
CCDC7-208ENST00000537047 LDB1Q86U70 411 aaPredicted RBP3.9□□□□□ -1.79
CCDC7-208ENST00000537047 SLC25A42Q86VD7 318 aa3.9□□□□□ -1.79
CCDC7-208ENST00000537047 KCNMB4Q86W47 210 aa3.9□□□□□ -1.79
CCDC7-208ENST00000537047 METTL4Q8N3J2 472 aa3.9□□□□□ -1.79
CCDC7-208ENST00000537047 Q8N7P7 452 aa3.9□□□□□ -1.79
CCDC7-208ENST00000537047 IL17REQ8NFR9 667 aa3.9□□□□□ -1.79
CCDC7-208ENST00000537047 TOMM40LQ969M1 308 aa3.9□□□□□ -1.79
CCDC7-208ENST00000537047 PGAM5Q96HS1 289 aa3.9□□□□□ -1.79
CCDC7-208ENST00000537047 TBATAQ96M53 351 aa3.9□□□□□ -1.79
CCDC7-208ENST00000537047 FAM218AQ96MZ4 157 aa3.9□□□□□ -1.79
CCDC7-208ENST00000537047 FTOQ9C0B1 505 aaKnown RBP eCLIP3.9□□□□□ -1.79
CCDC7-208ENST00000537047 HRH4Q9H3N8 390 aa3.9□□□□□ -1.79
CCDC7-208ENST00000537047 THAP10Q9P2Z0 257 aaPredicted RBP3.9□□□□□ -1.79
CCDC7-208ENST00000537047 ORC3Q9UBD5 711 aaPredicted RBP3.9□□□□□ -1.79
CCDC7-208ENST00000537047 STUB1Q9UNE7 303 aa3.9□□□□□ -1.79
CCDC7-208ENST00000537047 TMEM98Q9Y2Y6 226 aa3.9□□□□□ -1.79
CCDC7-208ENST00000537047 STYXL1Q9Y6J8 313 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms